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The map label for this gene is 158317965

Identifier: 158317965

GI number: 158317965

Start: 7560592

End: 7562733

Strand: Direct

Name: 158317965

Synonym: Franean1_6225

Alternate gene names: NA

Gene position: 7560592-7562733 (Clockwise)

Preceding gene: 158317962

Following gene: 158317966

Centisome position: 84.17

GC content: 69.75

Gene sequence:

>2142_bases
GTGGGCGGATCTAGCCGGCACGGCCGCGAGAACTCGGCCGCCGCTCTGGATCCACCCGACGGAACTGACCCGGGCGCTCC
GCCCGGGTCCGAGACCGGGCTGTTCACCTCGCAGCTGTTCGAGCTGGCCCCGATCGGCCTGCTGATCACTGACCGGAAGC
TGCGGGTACGCCAGATGAACCGCGCGATGCGAGCCATCAATGGGTTGTCCGCCAGCGACATCGGGCAACGACCGTTGAGC
GAGTTGCTCCCCGACGTCCACCCCGGGGCCTGGGAGGTGATCCGTCAGGTCCTTGCCACCGGCGAGCCCATCCTCAACGT
GGAGATCACCGGTTCCACTCCTGCCCCCTGGCCAGGGCAGCGGACTTGGCGGGTGTCCCACTATCCGCTCCGCGGCGGGG
ACGGGTCCGTCGCAGCGGTGGGCGTCGCCCTGGTGGACGTGACCGACCAGCGGCGGGCGGAGGCCGCGCGGGACAAGGTG
GAACAGCGGTTGCGGCTGCTGGGCCGGGCCAGTGGGTTGATCGGAGCGTCACTGGACCTGACGGCGACGCTGGAGGGGAT
GGTCGAGCTCATCGTTCCCGAGTTCGCCGACAACTGCGACCTGTACCTCACCGAGGAGCCGCTGGACGCGACCGCCCCGC
CGGCCCGGCTGCCGCTGCGTCTCACCGTCGCCGGGAACACGCCGTTGCTGCCGCCGCCGGAGGCCCACCAGCTCCTGCCT
TCCGCCATCACCTATGTCGACCAGGACAACCCAGCGCACCGTTCGCTCGCCACCCGCCGTCCGGTCCTCTTCGACGTCGA
CGAGCGGGTGATCGCCAGCGTCGATCATCCCCAGCGGGATGAGCACTTCGAATACATCGCCGTTCGCACCGCGATCACTG
TCCCGCTGCTGGTCGGCAACGAATACCACGGTTCGGTGTACCTCGGTCTCGGGCAGTCCGGGCGGACCTACATCGAGTAC
GACGTGCAGACCGCGGCGGAGCTCGGCAGCCGGATCGCCAATGCGGTCGCCAACGCTCGCGCCTTCGACCGCCAGCGCAC
GGCCGCAATCACCCTGCAACGCGGGCTGCTGCCCGGCGGGTTGCCGGCTGTCGAGGGTCTGGACATCGAATGGCGCTACG
AGCCCGGCACGGCAGGAACCGAGGTCGGCGGCGACTGGTTCGACATCGTGCCGCTGTCGGCCGGCCGGGTCGCCCTCGTC
ATCGGCGACGTGATGGGCCGCGGTCTGGCCGCCGCCGCCGTGATGGGCCAGGTCCGCGCCGCGGTCCGTGCCTTCGCCGC
CCTCGACCTCCCGGCAGCGGACGTCCTGACGCACCTCGACAGCCTGGTGCAGAATATCGGTGCCGGGCCGGACGGTGCCC
TCGTCAGCTGCGTCTACGCAATCTTCGAGCCGGCAACCGCCAGCATCACCGTCGCCAACGCGGGTCACCTCCCGCCCGCC
CTCGTCGATGCGTACACAGACGCTCGACTGCTGGAGGAGCCGGAAGGAATCATCCTCGGCATTGGCGGCCCACCGTGCAC
CGAAGTTCGGTACCCGTTCCCGGCAGGCAGCACCCTCGCCCTCTACACCGACGGACTCATCGAATCCCCGAAGATTGACA
TCGGCCAGGGTGTCCGCCAGCTGCAGGCGGCCCTCGTCGCCACCGGCAGCTTGCCCGCCACGGCCGAGCGGCTGCTCACC
CTCATCGACCGCAGCGGCGGTTACGACGACGACGTCGCCCTCCTCCTCGTCCGCGCCACCGCACGCGCCACCACCTGGAC
AACCACCGTGGAGCCCGATCCGCGGGCCGCCAAAGCCGCCCGCGACACCACCGTCACCGCGTTGCGGCAGTGGGAGCTCA
CCGACAGCGTCGACCTTGTGGAGCTCCTCGTCAGCGAGCTCGTCACGAACGCCATCCGGTACGCGAAGACCCCCAGCGAC
CTGACGCTACGCCGCGGTCGCCACGCCCTCTACGTCGAAATCGCCGATGGCGACAGCCGGGTGCCGCGCCTGCTGAACCC
TTCCGCCGATGACGAGGGCGGTCGCGGGCTTCAGCTTGTCGCCCAACTCGCCACCCAGTGGGGAGCTCGTCCCACCCGCA
CCGGGAAGACAGTCTGGTTCGAACTCGACCTGACCGGCGCGGATATGAAACGGTCAGAATAA

Upstream 100 bases:

>100_bases
CCCACCGCTTTTCGTTGCTGTCGTACGCCCGTACCGCGAAGCAGGCCCCCTGTAACCGGCTTCTGGGCGCCAGACGTTCA
GTCCGGTGGTGATTGGTGAC

Downstream 100 bases:

>100_bases
GGGCGAGGACAGGTTGGCGGTCGAGGTGGCGAAGAGCAGCGCCTCGTCGGCGGCGAACAGGTCCGCCCGGCGGAAAAGCG
CCGACATCGGCAATTCCGGG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MGGSSRHGRENSAAALDPPDGTDPGAPPGSETGLFTSQLFELAPIGLLITDRKLRVRQMNRAMRAINGLSASDIGQRPLS
ELLPDVHPGAWEVIRQVLATGEPILNVEITGSTPAPWPGQRTWRVSHYPLRGGDGSVAAVGVALVDVTDQRRAEAARDKV
EQRLRLLGRASGLIGASLDLTATLEGMVELIVPEFADNCDLYLTEEPLDATAPPARLPLRLTVAGNTPLLPPPEAHQLLP
SAITYVDQDNPAHRSLATRRPVLFDVDERVIASVDHPQRDEHFEYIAVRTAITVPLLVGNEYHGSVYLGLGQSGRTYIEY
DVQTAAELGSRIANAVANARAFDRQRTAAITLQRGLLPGGLPAVEGLDIEWRYEPGTAGTEVGGDWFDIVPLSAGRVALV
IGDVMGRGLAAAAVMGQVRAAVRAFAALDLPAADVLTHLDSLVQNIGAGPDGALVSCVYAIFEPATASITVANAGHLPPA
LVDAYTDARLLEEPEGIILGIGGPPCTEVRYPFPAGSTLALYTDGLIESPKIDIGQGVRQLQAALVATGSLPATAERLLT
LIDRSGGYDDDVALLLVRATARATTWTTTVEPDPRAAKAARDTTVTALRQWELTDSVDLVELLVSELVTNAIRYAKTPSD
LTLRRGRHALYVEIADGDSRVPRLLNPSADDEGGRGLQLVAQLATQWGARPTRTGKTVWFELDLTGADMKRSE

Sequences:

>Translated_713_residues
MGGSSRHGRENSAAALDPPDGTDPGAPPGSETGLFTSQLFELAPIGLLITDRKLRVRQMNRAMRAINGLSASDIGQRPLS
ELLPDVHPGAWEVIRQVLATGEPILNVEITGSTPAPWPGQRTWRVSHYPLRGGDGSVAAVGVALVDVTDQRRAEAARDKV
EQRLRLLGRASGLIGASLDLTATLEGMVELIVPEFADNCDLYLTEEPLDATAPPARLPLRLTVAGNTPLLPPPEAHQLLP
SAITYVDQDNPAHRSLATRRPVLFDVDERVIASVDHPQRDEHFEYIAVRTAITVPLLVGNEYHGSVYLGLGQSGRTYIEY
DVQTAAELGSRIANAVANARAFDRQRTAAITLQRGLLPGGLPAVEGLDIEWRYEPGTAGTEVGGDWFDIVPLSAGRVALV
IGDVMGRGLAAAAVMGQVRAAVRAFAALDLPAADVLTHLDSLVQNIGAGPDGALVSCVYAIFEPATASITVANAGHLPPA
LVDAYTDARLLEEPEGIILGIGGPPCTEVRYPFPAGSTLALYTDGLIESPKIDIGQGVRQLQAALVATGSLPATAERLLT
LIDRSGGYDDDVALLLVRATARATTWTTTVEPDPRAAKAARDTTVTALRQWELTDSVDLVELLVSELVTNAIRYAKTPSD
LTLRRGRHALYVEIADGDSRVPRLLNPSADDEGGRGLQLVAQLATQWGARPTRTGKTVWFELDLTGADMKRSE
>Mature_712_residues
GGSSRHGRENSAAALDPPDGTDPGAPPGSETGLFTSQLFELAPIGLLITDRKLRVRQMNRAMRAINGLSASDIGQRPLSE
LLPDVHPGAWEVIRQVLATGEPILNVEITGSTPAPWPGQRTWRVSHYPLRGGDGSVAAVGVALVDVTDQRRAEAARDKVE
QRLRLLGRASGLIGASLDLTATLEGMVELIVPEFADNCDLYLTEEPLDATAPPARLPLRLTVAGNTPLLPPPEAHQLLPS
AITYVDQDNPAHRSLATRRPVLFDVDERVIASVDHPQRDEHFEYIAVRTAITVPLLVGNEYHGSVYLGLGQSGRTYIEYD
VQTAAELGSRIANAVANARAFDRQRTAAITLQRGLLPGGLPAVEGLDIEWRYEPGTAGTEVGGDWFDIVPLSAGRVALVI
GDVMGRGLAAAAVMGQVRAAVRAFAALDLPAADVLTHLDSLVQNIGAGPDGALVSCVYAIFEPATASITVANAGHLPPAL
VDAYTDARLLEEPEGIILGIGGPPCTEVRYPFPAGSTLALYTDGLIESPKIDIGQGVRQLQAALVATGSLPATAERLLTL
IDRSGGYDDDVALLLVRATARATTWTTTVEPDPRAAKAARDTTVTALRQWELTDSVDLVELLVSELVTNAIRYAKTPSDL
TLRRGRHALYVEIADGDSRVPRLLNPSADDEGGRGLQLVAQLATQWGARPTRTGKTVWFELDLTGADMKRSE

Specific function: Unknown

COG id: COG2208

COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR001932
- InterPro:   IPR002645
- InterPro:   IPR010822 [H]

Pfam domain/function: PF02518 HATPase_c; PF08448 PAS_4; PF07228 SpoIIE; PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 75978; Mature: 75847

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGSSRHGRENSAAALDPPDGTDPGAPPGSETGLFTSQLFELAPIGLLITDRKLRVRQMN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHH
RAMRAINGLSASDIGQRPLSELLPDVHPGAWEVIRQVLATGEPILNVEITGSTPAPWPGQ
HHHHHHCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
RTWRVSHYPLRGGDGSVAAVGVALVDVTDQRRAEAARDKVEQRLRLLGRASGLIGASLDL
CEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TATLEGMVELIVPEFADNCDLYLTEEPLDATAPPARLPLRLTVAGNTPLLPPPEAHQLLP
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
SAITYVDQDNPAHRSLATRRPVLFDVDERVIASVDHPQRDEHFEYIAVRTAITVPLLVGN
HHHHHCCCCCCHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEECC
EYHGSVYLGLGQSGRTYIEYDVQTAAELGSRIANAVANARAFDRQRTAAITLQRGLLPGG
CCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
LPAVEGLDIEWRYEPGTAGTEVGGDWFDIVPLSAGRVALVIGDVMGRGLAAAAVMGQVRA
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHCCHHHHHHHHHHHHH
AVRAFAALDLPAADVLTHLDSLVQNIGAGPDGALVSCVYAIFEPATASITVANAGHLPPA
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH
LVDAYTDARLLEEPEGIILGIGGPPCTEVRYPFPAGSTLALYTDGLIESPKIDIGQGVRQ
HHHHHHCHHHHCCCCCEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHH
LQAALVATGSLPATAERLLTLIDRSGGYDDDVALLLVRATARATTWTTTVEPDPRAAKAA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCEEEEEECCCCCHHHHHH
RDTTVTALRQWELTDSVDLVELLVSELVTNAIRYAKTPSDLTLRRGRHALYVEIADGDSR
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCC
VPRLLNPSADDEGGRGLQLVAQLATQWGARPTRTGKTVWFELDLTGADMKRSE
CCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
GGSSRHGRENSAAALDPPDGTDPGAPPGSETGLFTSQLFELAPIGLLITDRKLRVRQMN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHH
RAMRAINGLSASDIGQRPLSELLPDVHPGAWEVIRQVLATGEPILNVEITGSTPAPWPGQ
HHHHHHCCCCHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
RTWRVSHYPLRGGDGSVAAVGVALVDVTDQRRAEAARDKVEQRLRLLGRASGLIGASLDL
CEEEEEECCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TATLEGMVELIVPEFADNCDLYLTEEPLDATAPPARLPLRLTVAGNTPLLPPPEAHQLLP
HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHH
SAITYVDQDNPAHRSLATRRPVLFDVDERVIASVDHPQRDEHFEYIAVRTAITVPLLVGN
HHHHHCCCCCCHHHHHHHCCCEEEECCHHHHHCCCCCCCCCCCEEEEEEEEEEEEEEECC
EYHGSVYLGLGQSGRTYIEYDVQTAAELGSRIANAVANARAFDRQRTAAITLQRGLLPGG
CCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
LPAVEGLDIEWRYEPGTAGTEVGGDWFDIVPLSAGRVALVIGDVMGRGLAAAAVMGQVRA
CCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEHHHCCHHHHHHHHHHHHH
AVRAFAALDLPAADVLTHLDSLVQNIGAGPDGALVSCVYAIFEPATASITVANAGHLPPA
HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHH
LVDAYTDARLLEEPEGIILGIGGPPCTEVRYPFPAGSTLALYTDGLIESPKIDIGQGVRQ
HHHHHHCHHHHCCCCCEEEECCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHH
LQAALVATGSLPATAERLLTLIDRSGGYDDDVALLLVRATARATTWTTTVEPDPRAAKAA
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHCCCEEEEEECCCCCHHHHHH
RDTTVTALRQWELTDSVDLVELLVSELVTNAIRYAKTPSDLTLRRGRHALYVEIADGDSR
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECCCCCC
VPRLLNPSADDEGGRGLQLVAQLATQWGARPTRTGKTVWFELDLTGADMKRSE
CCHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]