| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317933
Identifier: 158317933
GI number: 158317933
Start: 7523142
End: 7523513
Strand: Direct
Name: 158317933
Synonym: Franean1_6191
Alternate gene names: NA
Gene position: 7523142-7523513 (Clockwise)
Preceding gene: 158317932
Following gene: 158317934
Centisome position: 83.76
GC content: 63.17
Gene sequence:
>372_bases ATGAACAGCGTCGACGTTGCACTGAAGGAATCGCTGGAGATCGAGGGGGCGACCGGGGTCGCCCTCGTCGACTTCACGAG TGGGATGACGCTCGGCAAGCTGAGTAACATCCATAACTTCGACCTGGAGATCGCGGCCGCCGGGAACACCGAGGTCGTCC GGGCGAAGATCCGCACGATGGAGAGCCTCGGCCTGCAGGACACCATCGAGGACATCCTCATCACCCTCGGTCGGCAGTAC CACCTGATCAGGCTTCTGAGCAGCCACACTGGGCGCGGCCTGTTCCTGTATCTGGTGCTGGACAAGAGCCGCGCGAACCT GGCGATGGCCCGCCACCGGTTGCGCACCATCGAGTCACGCCTCGACATGTGA
Upstream 100 bases:
>100_bases GCTCGGGACCTGGTGGTTTGCACGAGCGGACCGATCCGCCAACGACGAAGGCAGTGACCTGGCTGCCCTGGAAGAAGTTG ATGATCACGTGGGAGGCGAC
Downstream 100 bases:
>100_bases CGTCCGCCAGCTCGTGGTCGGCCGCCGCCGGCACGGTCCGCCCGGGACGGCGCTCCCGCGGCGGGGCCGAACCACGAGCG AGCCGGTGCCGGCCCCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNSVDVALKESLEIEGATGVALVDFTSGMTLGKLSNIHNFDLEIAAAGNTEVVRAKIRTMESLGLQDTIEDILITLGRQY HLIRLLSSHTGRGLFLYLVLDKSRANLAMARHRLRTIESRLDM
Sequences:
>Translated_123_residues MNSVDVALKESLEIEGATGVALVDFTSGMTLGKLSNIHNFDLEIAAAGNTEVVRAKIRTMESLGLQDTIEDILITLGRQY HLIRLLSSHTGRGLFLYLVLDKSRANLAMARHRLRTIESRLDM >Mature_123_residues MNSVDVALKESLEIEGATGVALVDFTSGMTLGKLSNIHNFDLEIAAAGNTEVVRAKIRTMESLGLQDTIEDILITLGRQY HLIRLLSSHTGRGLFLYLVLDKSRANLAMARHRLRTIESRLDM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13624; Mature: 13624
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVDVALKESLEIEGATGVALVDFTSGMTLGKLSNIHNFDLEIAAAGNTEVVRAKIRTM CCCCCHHHHCCEEECCCCCEEEEEECCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHH ESLGLQDTIEDILITLGRQYHLIRLLSSHTGRGLFLYLVLDKSRANLAMARHRLRTIESR HHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH LDM HCC >Mature Secondary Structure MNSVDVALKESLEIEGATGVALVDFTSGMTLGKLSNIHNFDLEIAAAGNTEVVRAKIRTM CCCCCHHHHCCEEECCCCCEEEEEECCCCCCHHCCCCCCCCEEEEECCCCHHHHHHHHHH ESLGLQDTIEDILITLGRQYHLIRLLSSHTGRGLFLYLVLDKSRANLAMARHRLRTIESR HHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHH LDM HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA