Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317934

Identifier: 158317934

GI number: 158317934

Start: 7524530

End: 7525528

Strand: Direct

Name: 158317934

Synonym: Franean1_6192

Alternate gene names: NA

Gene position: 7524530-7525528 (Clockwise)

Preceding gene: 158317933

Following gene: 158317936

Centisome position: 83.77

GC content: 64.56

Gene sequence:

>999_bases
ATGAGCATTCCGCGGCGTCAGGCGATCAAGATCGGTGCCTATCTGCTGAAGCAGAAAATCGCACGTCGAGACAAGTTCCC
GATCACGCTCGAGCTGGAACCGCTGTTCGCGTGCAACCTCTCCTGCGAGGGCTGCGGCAAGATCCAGCACCCCGCGGACG
TCCTCAAGCAGCGCATGCCGGTCGAGCAGGCGCTCGCCGCCGTCGACGAGTGCGGCGCGCCCGTCGTGTGTCTGGCGGGT
GGCGAGCCGCTGATGCACCCACAGATCGAGCAGATCGTGGAAGGCCTGGTCAAGCGCAAGAAGTTCATCTACCTCTGCAC
GAACGCGGTACTGCTCCCACGCAAGATCGACAAGCTGAAGCCCTCGCCGTACCTGTCGCTCGCGGTGCACATCGACGGGC
TCGAGGACCGCCACGACGAGTCCGTGGCGAAGAAGGGCGTCTTCGCCCAGGCCGTCGACGCGATCAAGGACGCGCAGGAC
CGCGGATTCCGGGTGACGACGAACACCACGTTCTTCAACACCGACACCCCGCAAACCGTCATCGAGGTGCTGGACTTCCT
GAACAACGACCTCAATGTCGACGGCATGATGCTCTCGCCGGCCTATGCCTACGAGAAGGCCCCTGAGCAGGACAAGTTCC
TGGGCGTCAAGGAGACTCAGGAGCTTTTCCGCAAGGCGTTCGCCGACGGTCGGCGCAAGCGCTGGCGCATCCAGCACTCG
CCGCTGTTCCTCGACTTCCTTGAGGGCAAGGTCGACTTCCCCTGCACCGCGTGGGGAATTCCGTCGTACTCCCTCTACGG
CTGGCAGAAGCCGTGCTATCTGATGGGTGACGGATACGCCTCGAGCTACCAGGAGCTTCTCGACACCACCGACTGGGAGT
CGTACGGCCGTGGCCGCGACCCCCGCTGCGAGAACTGCATGGCCCACTGCGGCTACGAGCCGACGGCCATCGCCGCCACG
CTGACCTCGCTGCGGGAGTCCATCCGCGCGACGCGCTGA

Upstream 100 bases:

>100_bases
AAGAACTAGATAAGGCTCCTCCTTAGACTTAGGGGAGCGGTACGGCATCGCGACTCCACCACCCACCAGGCGAACGTAGA
TCAACACCGGAAGGGTGAAT

Downstream 100 bases:

>100_bases
GACACTCGGCGAGCGGATGCGGAAGATGATCTCGGTGACGGCGGTCGTCGCCCTCCGGCCAGAGGGCGACGACCGCCGCA
CCGAGGTCCTCCACGCTGCT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Radical SAM Domain Protein; Molybdenum Cofactor Biosynthesis Protein A; MoaA/NifB/PqqE Family Protein; MoaA NifB PqqE Radical SAM Superfamily Protein; Co PQQ Synthesis Protein E; Radical S-Adenosylmethionine Superfamily Protein; Iron-Sulfur Oxidoreductase; MoaA/NifB/PqqE Family Fe-S Oxidoreductase; Radical SAM Oxidoreductase; Heme D1 Biosynthesis Protein; Hopanoid Biosynthesis Associated Radical SAM Protein; Heme Biosynthesis Protein; Fe-S Oxidoreductase; Radical SAM Protein; Radical SAM Superfamily; Radical SAM; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MSIPRRQAIKIGAYLLKQKIARRDKFPITLELEPLFACNLSCEGCGKIQHPADVLKQRMPVEQALAAVDECGAPVVCLAG
GEPLMHPQIEQIVEGLVKRKKFIYLCTNAVLLPRKIDKLKPSPYLSLAVHIDGLEDRHDESVAKKGVFAQAVDAIKDAQD
RGFRVTTNTTFFNTDTPQTVIEVLDFLNNDLNVDGMMLSPAYAYEKAPEQDKFLGVKETQELFRKAFADGRRKRWRIQHS
PLFLDFLEGKVDFPCTAWGIPSYSLYGWQKPCYLMGDGYASSYQELLDTTDWESYGRGRDPRCENCMAHCGYEPTAIAAT
LTSLRESIRATR

Sequences:

>Translated_332_residues
MSIPRRQAIKIGAYLLKQKIARRDKFPITLELEPLFACNLSCEGCGKIQHPADVLKQRMPVEQALAAVDECGAPVVCLAG
GEPLMHPQIEQIVEGLVKRKKFIYLCTNAVLLPRKIDKLKPSPYLSLAVHIDGLEDRHDESVAKKGVFAQAVDAIKDAQD
RGFRVTTNTTFFNTDTPQTVIEVLDFLNNDLNVDGMMLSPAYAYEKAPEQDKFLGVKETQELFRKAFADGRRKRWRIQHS
PLFLDFLEGKVDFPCTAWGIPSYSLYGWQKPCYLMGDGYASSYQELLDTTDWESYGRGRDPRCENCMAHCGYEPTAIAAT
LTSLRESIRATR
>Mature_331_residues
SIPRRQAIKIGAYLLKQKIARRDKFPITLELEPLFACNLSCEGCGKIQHPADVLKQRMPVEQALAAVDECGAPVVCLAGG
EPLMHPQIEQIVEGLVKRKKFIYLCTNAVLLPRKIDKLKPSPYLSLAVHIDGLEDRHDESVAKKGVFAQAVDAIKDAQDR
GFRVTTNTTFFNTDTPQTVIEVLDFLNNDLNVDGMMLSPAYAYEKAPEQDKFLGVKETQELFRKAFADGRRKRWRIQHSP
LFLDFLEGKVDFPCTAWGIPSYSLYGWQKPCYLMGDGYASSYQELLDTTDWESYGRGRDPRCENCMAHCGYEPTAIAATL
TSLRESIRATR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37417; Mature: 37286

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPRRQAIKIGAYLLKQKIARRDKFPITLELEPLFACNLSCEGCGKIQHPADVLKQRMP
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHCC
VEQALAAVDECGAPVVCLAGGEPLMHPQIEQIVEGLVKRKKFIYLCTNAVLLPRKIDKLK
HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCEECCHHHHHCC
PSPYLSLAVHIDGLEDRHDESVAKKGVFAQAVDAIKDAQDRGFRVTTNTTFFNTDTPQTV
CCCCEEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCEEECCCCHHHH
IEVLDFLNNDLNVDGMMLSPAYAYEKAPEQDKFLGVKETQELFRKAFADGRRKRWRIQHS
HHHHHHHCCCCCCCCEEECCHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCHHHEEECCC
PLFLDFLEGKVDFPCTAWGIPSYSLYGWQKPCYLMGDGYASSYQELLDTTDWESYGRGRD
CEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCC
PRCENCMAHCGYEPTAIAATLTSLRESIRATR
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIPRRQAIKIGAYLLKQKIARRDKFPITLELEPLFACNLSCEGCGKIQHPADVLKQRMP
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCCCCHHHHHHHHCC
VEQALAAVDECGAPVVCLAGGEPLMHPQIEQIVEGLVKRKKFIYLCTNAVLLPRKIDKLK
HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEECCCEECCHHHHHCC
PSPYLSLAVHIDGLEDRHDESVAKKGVFAQAVDAIKDAQDRGFRVTTNTTFFNTDTPQTV
CCCCEEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEECCEEECCCCHHHH
IEVLDFLNNDLNVDGMMLSPAYAYEKAPEQDKFLGVKETQELFRKAFADGRRKRWRIQHS
HHHHHHHCCCCCCCCEEECCHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCHHHEEECCC
PLFLDFLEGKVDFPCTAWGIPSYSLYGWQKPCYLMGDGYASSYQELLDTTDWESYGRGRD
CEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCHHHHCCCCC
PRCENCMAHCGYEPTAIAATLTSLRESIRATR
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA