| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is add [H]
Identifier: 158317840
GI number: 158317840
Start: 7423208
End: 7424314
Strand: Reverse
Name: add [H]
Synonym: Franean1_6098
Alternate gene names: 158317840
Gene position: 7424314-7423208 (Counterclockwise)
Preceding gene: 158317841
Following gene: 158317839
Centisome position: 82.66
GC content: 75.25
Gene sequence:
>1107_bases GTGGGTAGCGGGCCGAAGATCGAGCTGCACGTCCACCTCGAGGGGACGGTGCGGCCGGAGATGCTGCTCGCGATGGCGCG CCGCAACAACGAGGCGCTGCCGGCCCGCACCGTCGAGGGCGTAGCCGAGCTGTACCGCTTCCGCGACTTCGACCACTTCC TCAAGGTCTGGGTGCTCACGACGCAGGTCATGCGCACGGCCGACGACTTCCGCGAGATCGTCGTCGACTACGCGGGACGG GCCGCCGCGCAGGGCGCCGTCTACCTCGAAGGCATCTTCTCGCCGTGGTTCCGGGTGAACCGGGGCGTGCCCTGGCAGGA GATCTTCACCGGCTACGCCGAGGGTGCCGTCGAGGCCCGCGAGCGCTTCGGGGTCGAGGTACGGCTGACCCCGGACATCG ACCGGGTGCTGCCACCCGAGGTCGCGATGGACGTCGTCGGCTGGGCAGCCCGGTTCACCGACCGCGGTGTCGTCGGGATC GGGCTCGGCGGGCCCGAGGTGGGCCATCCGCCGGAGCCGTACGCGCCGGTCTTCGCCGCCGCCGCGGACGCCGGCCTGCC CGCCGTCCCGCACGCGGGGGAGACGGCCGGCGCCGAGTCGGTGCGCGGCGCGCTGCACGCGCTGGGGGCGAGGCGGATCC GGCACGGCGTGCGGGCCCTCGAGGACCCCGAGCTCGTCGCCGAGCTGGTAGAGCGGGGCATCGTGCTGGACGTCTGCCCG ACGTCGAACCTGCGGACGGGTGTCGTCACCGACCTGGCGGCGCACCCGCTGCCCGAGCTGCTCGCGGCCGGGCTGCGCTG CTCGCTGGCCACCGACGATCCGGCGATGTTCGGCACGGATCTCGAACGGGAGTACGCCGCCGCGGCGGGCCTCGGGGTGC GCCTCGCCCGGCTCTACGAGGCCGGGGTTGCCGGCGCGCTGTGCGACGACCGGACCCGGTCCCGGCTGGCGGCGCTCGGG GCCGGCACGGACTGGGACGCCGCCCAGGCCACGGCGCTCGCCGCCGAGGCTGCTGGGTCCGCGCTGGCCGGGTCCGCGCT GGCCGGGTCTGACGCGGCTGGGTCCGCGACGGCGGGGTCCGTGGCCATGACGAACGCAGAGGGATGA
Upstream 100 bases:
>100_bases CCTGAGCCACGACCAGCGCCACGAACCGAACGCTGTCCCGAAGGCCGTCCCGAACGCTGTGTCGATGTCCGCTGAGGCGG TCAGGGGTGAGCCGGCCGCG
Downstream 100 bases:
>100_bases GCCGGTGAGTCGAGCAGGTCTGGACAAGAAGCCCGACCAGGTGGCCGCGATGTTCGACCAGGTCGCGCGGCGGTACGACG TGACGAACGCGGTGCTGTCG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MGSGPKIELHVHLEGTVRPEMLLAMARRNNEALPARTVEGVAELYRFRDFDHFLKVWVLTTQVMRTADDFREIVVDYAGR AAAQGAVYLEGIFSPWFRVNRGVPWQEIFTGYAEGAVEARERFGVEVRLTPDIDRVLPPEVAMDVVGWAARFTDRGVVGI GLGGPEVGHPPEPYAPVFAAAADAGLPAVPHAGETAGAESVRGALHALGARRIRHGVRALEDPELVAELVERGIVLDVCP TSNLRTGVVTDLAAHPLPELLAAGLRCSLATDDPAMFGTDLEREYAAAAGLGVRLARLYEAGVAGALCDDRTRSRLAALG AGTDWDAAQATALAAEAAGSALAGSALAGSDAAGSATAGSVAMTNAEG
Sequences:
>Translated_368_residues MGSGPKIELHVHLEGTVRPEMLLAMARRNNEALPARTVEGVAELYRFRDFDHFLKVWVLTTQVMRTADDFREIVVDYAGR AAAQGAVYLEGIFSPWFRVNRGVPWQEIFTGYAEGAVEARERFGVEVRLTPDIDRVLPPEVAMDVVGWAARFTDRGVVGI GLGGPEVGHPPEPYAPVFAAAADAGLPAVPHAGETAGAESVRGALHALGARRIRHGVRALEDPELVAELVERGIVLDVCP TSNLRTGVVTDLAAHPLPELLAAGLRCSLATDDPAMFGTDLEREYAAAAGLGVRLARLYEAGVAGALCDDRTRSRLAALG AGTDWDAAQATALAAEAAGSALAGSALAGSDAAGSATAGSVAMTNAEG >Mature_367_residues GSGPKIELHVHLEGTVRPEMLLAMARRNNEALPARTVEGVAELYRFRDFDHFLKVWVLTTQVMRTADDFREIVVDYAGRA AAQGAVYLEGIFSPWFRVNRGVPWQEIFTGYAEGAVEARERFGVEVRLTPDIDRVLPPEVAMDVVGWAARFTDRGVVGIG LGGPEVGHPPEPYAPVFAAAADAGLPAVPHAGETAGAESVRGALHALGARRIRHGVRALEDPELVAELVERGIVLDVCPT SNLRTGVVTDLAAHPLPELLAAGLRCSLATDDPAMFGTDLEREYAAAAGLGVRLARLYEAGVAGALCDDRTRSRLAALGA GTDWDAAQATALAAEAAGSALAGSALAGSDAAGSATAGSVAMTNAEG
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=302, Percent_Identity=30.1324503311258, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI29029552, Length=168, Percent_Identity=34.5238095238095, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI29029550, Length=168, Percent_Identity=34.5238095238095, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1787910, Length=307, Percent_Identity=32.8990228013029, Blast_Score=151, Evalue=8e-38, Organism=Caenorhabditis elegans, GI17538512, Length=318, Percent_Identity=25.7861635220126, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI32565969, Length=318, Percent_Identity=25.7861635220126, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6324188, Length=326, Percent_Identity=30.0613496932515, Blast_Score=162, Evalue=8e-41, Organism=Drosophila melanogaster, GI24645260, Length=292, Percent_Identity=29.1095890410959, Blast_Score=101, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 38563; Mature: 38432
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSGPKIELHVHLEGTVRPEMLLAMARRNNEALPARTVEGVAELYRFRDFDHFLKVWVLT CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TQVMRTADDFREIVVDYAGRAAAQGAVYLEGIFSPWFRVNRGVPWQEIFTGYAEGAVEAR HHHHHHHHHHHHHHHHHHCHHHHCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ERFGVEVRLTPDIDRVLPPEVAMDVVGWAARFTDRGVVGIGLGGPEVGHPPEPYAPVFAA HHCCCEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH AADAGLPAVPHAGETAGAESVRGALHALGARRIRHGVRALEDPELVAELVERGIVLDVCP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECC TSNLRTGVVTDLAAHPLPELLAAGLRCSLATDDPAMFGTDLEREYAAAAGLGVRLARLYE CCCCCCHHHHHHHHCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGVAGALCDDRTRSRLAALGAGTDWDAAQATALAAEAAGSALAGSALAGSDAAGSATAGS HCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC VAMTNAEG EEECCCCC >Mature Secondary Structure GSGPKIELHVHLEGTVRPEMLLAMARRNNEALPARTVEGVAELYRFRDFDHFLKVWVLT CCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TQVMRTADDFREIVVDYAGRAAAQGAVYLEGIFSPWFRVNRGVPWQEIFTGYAEGAVEAR HHHHHHHHHHHHHHHHHHCHHHHCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ERFGVEVRLTPDIDRVLPPEVAMDVVGWAARFTDRGVVGIGLGGPEVGHPPEPYAPVFAA HHCCCEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHH AADAGLPAVPHAGETAGAESVRGALHALGARRIRHGVRALEDPELVAELVERGIVLDVCP HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEECC TSNLRTGVVTDLAAHPLPELLAAGLRCSLATDDPAMFGTDLEREYAAAAGLGVRLARLYE CCCCCCHHHHHHHHCCHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGVAGALCDDRTRSRLAALGAGTDWDAAQATALAAEAAGSALAGSALAGSDAAGSATAGS HCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCC VAMTNAEG EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA