| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317715
Identifier: 158317715
GI number: 158317715
Start: 7277701
End: 7278021
Strand: Direct
Name: 158317715
Synonym: Franean1_5973
Alternate gene names: NA
Gene position: 7277701-7278021 (Clockwise)
Preceding gene: 158317714
Following gene: 158317724
Centisome position: 81.03
GC content: 71.03
Gene sequence:
>321_bases GTGGCAGACGATTCGCCGCACAGCAAGAAGCTTCAGGAACTGATGTTCCGGGCGTGGGAGACCTTCGGCGACGCGCGTCA TCTCGACAGCGACGACCGGGTCTTCGTGCAGGCGCTCGCGCGCCAGACCGCCGACCGGATCTCCGTCCTCTACGGAGCGA GCTGGCGAGAGGCGCTCGACTGGGTCGCGCAGCGGTACGTGCCGACCGCTGACCTGCCGGGCGGTACGACCCCGGTGTCA CCGAACGGCGCCGCCTCGAACGGCAGCCCGACCGTCAGCCGCCGCGGTACCGCCGCGGCGGAGGTCGGCTCCACCTCCTG A
Upstream 100 bases:
>100_bases GACACACTCCACCATCAACGGGATAGACCCCCCGAGTGCACACGTCGTGCGCGACTGGGGGAGACTGCCGCCGCGGTCCC CAAATGGTAGGGAGTTCGAC
Downstream 100 bases:
>100_bases CCGGGGTGGGCAGCGCAACCTGATCACCCCGCGGGGACCGATGTCGATCCCCGCGGGGTGACGGCGCCGGTGCGCCGGGC GTCAGCGCCGACGCTCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MADDSPHSKKLQELMFRAWETFGDARHLDSDDRVFVQALARQTADRISVLYGASWREALDWVAQRYVPTADLPGGTTPVS PNGAASNGSPTVSRRGTAAAEVGSTS
Sequences:
>Translated_106_residues MADDSPHSKKLQELMFRAWETFGDARHLDSDDRVFVQALARQTADRISVLYGASWREALDWVAQRYVPTADLPGGTTPVS PNGAASNGSPTVSRRGTAAAEVGSTS >Mature_105_residues ADDSPHSKKLQELMFRAWETFGDARHLDSDDRVFVQALARQTADRISVLYGASWREALDWVAQRYVPTADLPGGTTPVSP NGAASNGSPTVSRRGTAAAEVGSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11407; Mature: 11275
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDSPHSKKLQELMFRAWETFGDARHLDSDDRVFVQALARQTADRISVLYGASWREALD CCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WVAQRYVPTADLPGGTTPVSPNGAASNGSPTVSRRGTAAAEVGSTS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADDSPHSKKLQELMFRAWETFGDARHLDSDDRVFVQALARQTADRISVLYGASWREALD CCCCHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WVAQRYVPTADLPGGTTPVSPNGAASNGSPTVSRRGTAAAEVGSTS HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA