Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317714

Identifier: 158317714

GI number: 158317714

Start: 7276717

End: 7277418

Strand: Direct

Name: 158317714

Synonym: Franean1_5972

Alternate gene names: NA

Gene position: 7276717-7277418 (Clockwise)

Preceding gene: 158317711

Following gene: 158317715

Centisome position: 81.01

GC content: 74.07

Gene sequence:

>702_bases
GTGGACGGGCCGAGTCTGCGGATCGAACGGACAGGTGAGGTCGTCGAGCTGACCGAGGATGTGACCACCGTGGGTCGCGG
GCCGGGCGTGCACGTCTCGCTCCCGGACGCCAGCGTCTCCCGGCTGCATGCCGAGATCGTCCGCCGCGGGCCGTACGTGT
ATGTGGCCGATCTCGGGCTGTCGCGCAACGGCACCCGGGTGAACGGACGCCTCGTCGGCCGCAAGGTGCTCGCGGACGGC
GACATCGTCCGGTTCGGGGCGGCGGGGGTGCGGGTCCTGGACGAGCGGCCCGCCCTGGTCGCGGAGGAGCCTGCCCGCCT
CGCGGACCAGACGCTGTCGCCGAACGGAAACGGCGTCCGGGACGAGGAGCCACCGGGCCTCACCGGCCTGGAGGGCCTGG
CCGGCACCACCGCCGGGATGCGCATCCCCGACCCGCCCGACCTGACGCGCCGCGAGTGGGACGTGCTGCGCGCCCTGTGC
CGGCCGCTGACCGAGCCGGGGGTCTTCGTGATGCCCCGCTCGGCGCGGGAGATCGCCCGGGACCTTGTCGTCACCGAGGG
GGCGGTCAAACAGCACCTGCTCCGCCTGTACCGCAAGTTCGGGATCGCGCCCGGACCGAACCGCCGCGGGCGCCTCGCCA
ACGAGGCCGTCCGGCTCGGTGTGGTGCGGCCGATGGACGATGCGATGGCTCCACCGGGCTGA

Upstream 100 bases:

>100_bases
TTATCAGGCTCGCCACCGGGGATTGATCGAGGAGTTCTGGACAACCGGCCGGAGCTGCGCAGCCGCGTGCTCCGACATTG
GAAGGGGGAGGTAACCGACA

Downstream 100 bases:

>100_bases
CCCGTTCGAGGCACCCCGCGATCGAGCCGGACACCTGGGACACAACGGGATCACTCCGCCTCGAAACCGACCCGGCCGGC
CACGGAATCGGAGGATACCC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Transcriptional Regulator; FHA Domain-Containing Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG
DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC
RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG

Sequences:

>Translated_233_residues
MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG
DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC
RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG
>Mature_233_residues
MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG
DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC
RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25092; Mature: 25092

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGL
CCCCCEEEECCCCEEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
SRNGTRVNGRLVGRKVLADGDIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVR
CCCCCEECCEEECEEEECCCCEEEECCCCEEEECCCCCEECCCCHHHHHHCCCCCCCCCC
DEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALCRPLTEPGVFVMPRSAREIAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
DLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC
>Mature Secondary Structure
MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGL
CCCCCEEEECCCCEEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
SRNGTRVNGRLVGRKVLADGDIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVR
CCCCCEECCEEECEEEECCCCEEEECCCCEEEECCCCCEECCCCHHHHHHCCCCCCCCCC
DEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALCRPLTEPGVFVMPRSAREIAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH
DLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG
HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA