| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317714
Identifier: 158317714
GI number: 158317714
Start: 7276717
End: 7277418
Strand: Direct
Name: 158317714
Synonym: Franean1_5972
Alternate gene names: NA
Gene position: 7276717-7277418 (Clockwise)
Preceding gene: 158317711
Following gene: 158317715
Centisome position: 81.01
GC content: 74.07
Gene sequence:
>702_bases GTGGACGGGCCGAGTCTGCGGATCGAACGGACAGGTGAGGTCGTCGAGCTGACCGAGGATGTGACCACCGTGGGTCGCGG GCCGGGCGTGCACGTCTCGCTCCCGGACGCCAGCGTCTCCCGGCTGCATGCCGAGATCGTCCGCCGCGGGCCGTACGTGT ATGTGGCCGATCTCGGGCTGTCGCGCAACGGCACCCGGGTGAACGGACGCCTCGTCGGCCGCAAGGTGCTCGCGGACGGC GACATCGTCCGGTTCGGGGCGGCGGGGGTGCGGGTCCTGGACGAGCGGCCCGCCCTGGTCGCGGAGGAGCCTGCCCGCCT CGCGGACCAGACGCTGTCGCCGAACGGAAACGGCGTCCGGGACGAGGAGCCACCGGGCCTCACCGGCCTGGAGGGCCTGG CCGGCACCACCGCCGGGATGCGCATCCCCGACCCGCCCGACCTGACGCGCCGCGAGTGGGACGTGCTGCGCGCCCTGTGC CGGCCGCTGACCGAGCCGGGGGTCTTCGTGATGCCCCGCTCGGCGCGGGAGATCGCCCGGGACCTTGTCGTCACCGAGGG GGCGGTCAAACAGCACCTGCTCCGCCTGTACCGCAAGTTCGGGATCGCGCCCGGACCGAACCGCCGCGGGCGCCTCGCCA ACGAGGCCGTCCGGCTCGGTGTGGTGCGGCCGATGGACGATGCGATGGCTCCACCGGGCTGA
Upstream 100 bases:
>100_bases TTATCAGGCTCGCCACCGGGGATTGATCGAGGAGTTCTGGACAACCGGCCGGAGCTGCGCAGCCGCGTGCTCCGACATTG GAAGGGGGAGGTAACCGACA
Downstream 100 bases:
>100_bases CCCGTTCGAGGCACCCCGCGATCGAGCCGGACACCTGGGACACAACGGGATCACTCCGCCTCGAAACCGACCCGGCCGGC CACGGAATCGGAGGATACCC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: LuxR Family Transcriptional Regulator; FHA Domain-Containing Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG
Sequences:
>Translated_233_residues MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG >Mature_233_residues MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGLSRNGTRVNGRLVGRKVLADG DIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVRDEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALC RPLTEPGVFVMPRSAREIARDLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25092; Mature: 25092
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGL CCCCCEEEECCCCEEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC SRNGTRVNGRLVGRKVLADGDIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVR CCCCCEECCEEECEEEECCCCEEEECCCCEEEECCCCCEECCCCHHHHHHCCCCCCCCCC DEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALCRPLTEPGVFVMPRSAREIAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH DLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC >Mature Secondary Structure MDGPSLRIERTGEVVELTEDVTTVGRGPGVHVSLPDASVSRLHAEIVRRGPYVYVADLGL CCCCCEEEECCCCEEEHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCC SRNGTRVNGRLVGRKVLADGDIVRFGAAGVRVLDERPALVAEEPARLADQTLSPNGNGVR CCCCCEECCEEECEEEECCCCEEEECCCCEEEECCCCCEECCCCHHHHHHCCCCCCCCCC DEEPPGLTGLEGLAGTTAGMRIPDPPDLTRREWDVLRALCRPLTEPGVFVMPRSAREIAR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHH DLVVTEGAVKQHLLRLYRKFGIAPGPNRRGRLANEAVRLGVVRPMDDAMAPPG HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA