| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is accD [H]
Identifier: 158317724
GI number: 158317724
Start: 7290091
End: 7291671
Strand: Direct
Name: accD [H]
Synonym: Franean1_5982
Alternate gene names: 158317724
Gene position: 7290091-7291671 (Clockwise)
Preceding gene: 158317715
Following gene: 158317725
Centisome position: 81.16
GC content: 77.74
Gene sequence:
>1581_bases ATGGCTGAGCGCGATTCCACCGCCACGGCCCAGGACTGGCGGGCCGCCGTCCTGGCCGATGTCATCCGCCGGCCCGCCGT CGCCGGCGCACCCAACCGCCTCGGCTGGCCGGGCTACGACGGACGTCCCGCGCTGTGGTGGGGCACCGGCCCGGTCGAGG GCGTGGACGCCGTCGTCGCGGTCTGGGACTTCGCGGTCAACGGGGGCAGCTTCGGGGAGGCCGACGCGGGCGCGTTCGCG GACGCGGCGGCCGAGGCCGTCGCCGGGCGGCGTCCGCTGGTGTCACTCGTGCGCAGCGGCGGGACGCGGCTGCAGGAGGG CGTGGCCGGGCTGGTGGGGCTGGCCCGGGTGTCCCTCGCGCTCGCCGAGGTCGCCGCGGCGGGCCTCCCCCATGTCGCCG TCTCGGACCAGCCGACCACCGGCGGGATGTGGGTCACCGTGGGCTCCCGCGCCGATCTGCGGTGCGCCGTGCTGGGCGCG ACGGTGGGGTTCGCCGGGCCCCGGGTGGTGGCCGCGGTCACCGGCGAGGCTCCCCCGGCCGGCGCCAGCCACACGGCGGC GGCCGCCCACGCCGCCGGGCTGGTGGACGCGGCCGTCGCGCCAGCCGCCGTCGCCTCGTGGCTGCGGCGCGCGCTGGACG CGGTCGCCGTTCCCGCCCGTGTCCTACCCGCCGCGCGCACACCCGACCGGCCTGTCAGGACAGACGCCGACGGCGACCGG GCCGGCATCGCCGACAACAGCCGGGCCGACGCCAGCCAGGCGGGGAGTGGGCCGGCGCCGGCCCGCGGCGGATGGGAGCA GGTCCTCGCCGCCCGCACCGGCCAGCGCAGGCATGCGGGCGACATCCTGGACGGCCTGTTCCCCGCCGGGGTGGACCTGA CCGGCCCGGACCGCACGGTGCGCGCCCGGGTCGGCCGGCTGGCCGGGACGCCCGTCGCCGACGGGGAACACAGCGCCGAC GGGGAATTGAGCGCAGGCGGTGAACCCGGCGCAGGCGGGCTCGGGCCGCGCGCCGTGGGGGTCGCGCTGGCGGCCGAACG CGGCGGTGCGCCGGGGCCGGCCGGGTACCGGCTGCTCGTGCGGGCCGCGGGCCTCGCCAGCCGGCTCGGCCTGCCACTCG TCACGCTGGTCGACACCCCGGGGGCGGAGTGCGGGCCAGCGGCCGAGGCGGGTGGCATCGCGGCCGAGATCGGCACGGCG ATGGCGGAGGTGCTCGGCTGCGCGTCGCCGACGCTCTCCGTGATCGTCGGTGAGGGCGGCTCGGGTGGGGCGCTGGCGGC GTGCTGTACCGATGTGGTCCTGATGTCGCCGGACAGCTACGTCACGGCGCTGTCCCCCGAGGGCACGGCCACCACGCTCC GGATCAGCGTCGAGCAGGCCGCGGACACCGCGGGGCTGCGCCCGTCGGACCTGGTCAGCCTGGGTTTCGCCGACGGCGTC CTCGCGCCGCGCGACACTGGTCCGCCCGGCCTGGCACACCGGGTGACCGAGGTGCTGACCGAGCTGACGATGCGCGACAG TGATGTCCGCCTTCGCCAACGAAGGGCAAAATGGTCGACAGGATTGGGTGGCTTTCTGTAA
Upstream 100 bases:
>100_bases GGCCGGCCGTGGCGGGCCGACGGTGACCGGGGGGCGGGCGGACGAGCGATCCCACACGTCACAGCACTGCCGGAGCCGAT CGCGGCGAGGATCTGTAGGC
Downstream 100 bases:
>100_bases CGTCGTTGACCCAACCTGCCACGGGAGACAGGTCGTCACGAAGGGGACGGTCATCGACACTCGGCTGTTCACCTGGATCG GCGGCGCCCAGCTCGACGGC
Product: carboxyl transferase
Products: NA
Alternate protein names: ACCase subunits beta/alpha; Acetyl-CoA carboxylase carboxyltransferase subunits beta/alpha [H]
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MAERDSTATAQDWRAAVLADVIRRPAVAGAPNRLGWPGYDGRPALWWGTGPVEGVDAVVAVWDFAVNGGSFGEADAGAFA DAAAEAVAGRRPLVSLVRSGGTRLQEGVAGLVGLARVSLALAEVAAAGLPHVAVSDQPTTGGMWVTVGSRADLRCAVLGA TVGFAGPRVVAAVTGEAPPAGASHTAAAAHAAGLVDAAVAPAAVASWLRRALDAVAVPARVLPAARTPDRPVRTDADGDR AGIADNSRADASQAGSGPAPARGGWEQVLAARTGQRRHAGDILDGLFPAGVDLTGPDRTVRARVGRLAGTPVADGEHSAD GELSAGGEPGAGGLGPRAVGVALAAERGGAPGPAGYRLLVRAAGLASRLGLPLVTLVDTPGAECGPAAEAGGIAAEIGTA MAEVLGCASPTLSVIVGEGGSGGALAACCTDVVLMSPDSYVTALSPEGTATTLRISVEQAADTAGLRPSDLVSLGFADGV LAPRDTGPPGLAHRVTEVLTELTMRDSDVRLRQRRAKWSTGLGGFL
Sequences:
>Translated_526_residues MAERDSTATAQDWRAAVLADVIRRPAVAGAPNRLGWPGYDGRPALWWGTGPVEGVDAVVAVWDFAVNGGSFGEADAGAFA DAAAEAVAGRRPLVSLVRSGGTRLQEGVAGLVGLARVSLALAEVAAAGLPHVAVSDQPTTGGMWVTVGSRADLRCAVLGA TVGFAGPRVVAAVTGEAPPAGASHTAAAAHAAGLVDAAVAPAAVASWLRRALDAVAVPARVLPAARTPDRPVRTDADGDR AGIADNSRADASQAGSGPAPARGGWEQVLAARTGQRRHAGDILDGLFPAGVDLTGPDRTVRARVGRLAGTPVADGEHSAD GELSAGGEPGAGGLGPRAVGVALAAERGGAPGPAGYRLLVRAAGLASRLGLPLVTLVDTPGAECGPAAEAGGIAAEIGTA MAEVLGCASPTLSVIVGEGGSGGALAACCTDVVLMSPDSYVTALSPEGTATTLRISVEQAADTAGLRPSDLVSLGFADGV LAPRDTGPPGLAHRVTEVLTELTMRDSDVRLRQRRAKWSTGLGGFL >Mature_525_residues AERDSTATAQDWRAAVLADVIRRPAVAGAPNRLGWPGYDGRPALWWGTGPVEGVDAVVAVWDFAVNGGSFGEADAGAFAD AAAEAVAGRRPLVSLVRSGGTRLQEGVAGLVGLARVSLALAEVAAAGLPHVAVSDQPTTGGMWVTVGSRADLRCAVLGAT VGFAGPRVVAAVTGEAPPAGASHTAAAAHAAGLVDAAVAPAAVASWLRRALDAVAVPARVLPAARTPDRPVRTDADGDRA GIADNSRADASQAGSGPAPARGGWEQVLAARTGQRRHAGDILDGLFPAGVDLTGPDRTVRARVGRLAGTPVADGEHSADG ELSAGGEPGAGGLGPRAVGVALAAERGGAPGPAGYRLLVRAAGLASRLGLPLVTLVDTPGAECGPAAEAGGIAAEIGTAM AEVLGCASPTLSVIVGEGGSGGALAACCTDVVLMSPDSYVTALSPEGTATTLRISVEQAADTAGLRPSDLVSLGFADGVL APRDTGPPGLAHRVTEVLTELTMRDSDVRLRQRRAKWSTGLGGFL
Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H
COG id: COG0825
COG function: function code I; Acetyl-CoA carboxylase alpha subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the AccA family [H]
Homologues:
Organism=Escherichia coli, GI1788655, Length=144, Percent_Identity=35.4166666666667, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI1786382, Length=245, Percent_Identity=30.2040816326531, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001095 - InterPro: IPR000438 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF03255 ACCA [H]
EC number: =6.4.1.2 [H]
Molecular weight: Translated: 52202; Mature: 52071
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERDSTATAQDWRAAVLADVIRRPAVAGAPNRLGWPGYDGRPALWWGTGPVEGVDAVVA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VWDFAVNGGSFGEADAGAFADAAAEAVAGRRPLVSLVRSGGTRLQEGVAGLVGLARVSLA HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEVAAAGLPHVAVSDQPTTGGMWVTVGSRADLRCAVLGATVGFAGPRVVAAVTGEAPPA HHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEHHHCCCCCEEEEEEECCCCCC GASHTAAAAHAAGLVDAAVAPAAVASWLRRALDAVAVPARVLPAARTPDRPVRTDADGDR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC AGIADNSRADASQAGSGPAPARGGWEQVLAARTGQRRHAGDILDGLFPAGVDLTGPDRTV CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHH RARVGRLAGTPVADGEHSADGELSAGGEPGAGGLGPRAVGVALAAERGGAPGPAGYRLLV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHCCCCCCCHHHHHHH RAAGLASRLGLPLVTLVDTPGAECGPAAEAGGIAAEIGTAMAEVLGCASPTLSVIVGEGG HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC SGGALAACCTDVVLMSPDSYVTALSPEGTATTLRISVEQAADTAGLRPSDLVSLGFADGV CCCHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEEHHHHHHHCCCCHHHHHEECCCCCC LAPRDTGPPGLAHRVTEVLTELTMRDSDVRLRQRRAKWSTGLGGFL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AERDSTATAQDWRAAVLADVIRRPAVAGAPNRLGWPGYDGRPALWWGTGPVEGVDAVVA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH VWDFAVNGGSFGEADAGAFADAAAEAVAGRRPLVSLVRSGGTRLQEGVAGLVGLARVSLA HHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LAEVAAAGLPHVAVSDQPTTGGMWVTVGSRADLRCAVLGATVGFAGPRVVAAVTGEAPPA HHHHHHCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEHHHCCCCCEEEEEEECCCCCC GASHTAAAAHAAGLVDAAVAPAAVASWLRRALDAVAVPARVLPAARTPDRPVRTDADGDR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCC AGIADNSRADASQAGSGPAPARGGWEQVLAARTGQRRHAGDILDGLFPAGVDLTGPDRTV CCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHH RARVGRLAGTPVADGEHSADGELSAGGEPGAGGLGPRAVGVALAAERGGAPGPAGYRLLV HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEHHCCCCCCCHHHHHHH RAAGLASRLGLPLVTLVDTPGAECGPAAEAGGIAAEIGTAMAEVLGCASPTLSVIVGEGG HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC SGGALAACCTDVVLMSPDSYVTALSPEGTATTLRISVEQAADTAGLRPSDLVSLGFADGV CCCHHHHHHHHHEEECCCCEEEEECCCCCEEEEEEEHHHHHHHCCCCHHHHHEECCCCCC LAPRDTGPPGLAHRVTEVLTELTMRDSDVRLRQRRAKWSTGLGGFL CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]