| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317706
Identifier: 158317706
GI number: 158317706
Start: 7266836
End: 7267726
Strand: Direct
Name: 158317706
Synonym: Franean1_5964
Alternate gene names: NA
Gene position: 7266836-7267726 (Clockwise)
Preceding gene: 158317704
Following gene: 158317707
Centisome position: 80.9
GC content: 71.6
Gene sequence:
>891_bases ATGAGCATCAACACCGCCAGCCGTCTCGCGGCACGCCGGGGAACCGGATCGGACCGGCTCGACATCCCGGTCGCCGGCCG ATCTCCACTGATCGCGGGCCGGGTGGACCGCGAGACGATCAGCCGCGGCGCCGAGACCATCGCGCGCTTCCTCGGTACCG GCCGCTACCTGGCCATCCAGACCTGTGTGGTGATCGTCTGGATCGCGCTCAACATCGCATTGCCGCTCATGCGCTGGGAT CCCTACCCGTTCATTCTGCTGAACCTGGCGTTCTCGACCCAGGCGGCCTACGCCGCCCCGCTGATCCTCCTCGCGCAGAA CCGGCAGGACGACCGGGACCGCGCCTCGCTCGCGGAGGACCGGGCGGCGGCCATCCGGATGCGTGAGGACACCGAGTTCC TGACCCGCGAGGTGGCGGCGCTGCGCCTCGCCCAGAGCGACGCCGCCACACGGCAGTACGTGCGCGGTGAGCTGACGAAC CAGCTCGAGTCACTGCGTGGTGACATCGAGGCGTTGCTCCGCATGGTGCTCCAGCCCACGGCACCGGCGGCGCACCCCCT CGCGGCCACCCCGAACGGGTCGGCGCAGCGCCCCGCGCGCGGCGGCGTGGCCTGGCCGTCCGTACCCGGTACGTCAACAG TCGCGACACTGACAGTGGACGAGCCCGCACACGCACACCCGACGGCGTCGGCGGATGCGCCGGCGGATCACGCGGGTCAG GACACCGCGACCGTCCCGGAGCCGGCTCTGGTCGTCGTCCCGGCGCCGGGCGCGCTCTCCCCGGACGGGGCAGCCACACA GGGCCATCTTCTCGTCCCGGCGCGAAGTGGTTCGCGGGCCGGACGAAAGGTACCCATCCGACCGACGCGAGCACGAATCC GAGACACGTGA
Upstream 100 bases:
>100_bases TGTCGACCCGGGCCGCGATGGGATTTCTCCCGCGCAGCCTGCTCTGAAGTGCGTATCGGCTCCGTCCGTTCGCGACGGCC GAGCGCGGAGGGGACCTCCT
Downstream 100 bases:
>100_bases CACGACAAACTCACCGGATGAAGATCGACCGGTAACGTTCGGTAGGTGCATGCCGGCCGGACGCGTCGACCCCGACCCGG CCCGCTCGAGCGCCGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSINTASRLAARRGTGSDRLDIPVAGRSPLIAGRVDRETISRGAETIARFLGTGRYLAIQTCVVIVWIALNIALPLMRWD PYPFILLNLAFSTQAAYAAPLILLAQNRQDDRDRASLAEDRAAAIRMREDTEFLTREVAALRLAQSDAATRQYVRGELTN QLESLRGDIEALLRMVLQPTAPAAHPLAATPNGSAQRPARGGVAWPSVPGTSTVATLTVDEPAHAHPTASADAPADHAGQ DTATVPEPALVVVPAPGALSPDGAATQGHLLVPARSGSRAGRKVPIRPTRARIRDT
Sequences:
>Translated_296_residues MSINTASRLAARRGTGSDRLDIPVAGRSPLIAGRVDRETISRGAETIARFLGTGRYLAIQTCVVIVWIALNIALPLMRWD PYPFILLNLAFSTQAAYAAPLILLAQNRQDDRDRASLAEDRAAAIRMREDTEFLTREVAALRLAQSDAATRQYVRGELTN QLESLRGDIEALLRMVLQPTAPAAHPLAATPNGSAQRPARGGVAWPSVPGTSTVATLTVDEPAHAHPTASADAPADHAGQ DTATVPEPALVVVPAPGALSPDGAATQGHLLVPARSGSRAGRKVPIRPTRARIRDT >Mature_295_residues SINTASRLAARRGTGSDRLDIPVAGRSPLIAGRVDRETISRGAETIARFLGTGRYLAIQTCVVIVWIALNIALPLMRWDP YPFILLNLAFSTQAAYAAPLILLAQNRQDDRDRASLAEDRAAAIRMREDTEFLTREVAALRLAQSDAATRQYVRGELTNQ LESLRGDIEALLRMVLQPTAPAAHPLAATPNGSAQRPARGGVAWPSVPGTSTVATLTVDEPAHAHPTASADAPADHAGQD TATVPEPALVVVPAPGALSPDGAATQGHLLVPARSGSRAGRKVPIRPTRARIRDT
Specific function: Unknown
COG id: COG4420
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31435; Mature: 31304
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINTASRLAARRGTGSDRLDIPVAGRSPLIAGRVDRETISRGAETIARFLGTGRYLAIQ CCCCHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH TCVVIVWIALNIALPLMRWDPYPFILLNLAFSTQAAYAAPLILLAQNRQDDRDRASLAED HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHCCEEEEECCCCCCHHHHHHHHH RAAAIRMREDTEFLTREVAALRLAQSDAATRQYVRGELTNQLESLRGDIEALLRMVLQPT HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAAHPLAATPNGSAQRPARGGVAWPSVPGTSTVATLTVDEPAHAHPTASADAPADHAGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC DTATVPEPALVVVPAPGALSPDGAATQGHLLVPARSGSRAGRKVPIRPTRARIRDT CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure SINTASRLAARRGTGSDRLDIPVAGRSPLIAGRVDRETISRGAETIARFLGTGRYLAIQ CCCHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCHHHHH TCVVIVWIALNIALPLMRWDPYPFILLNLAFSTQAAYAAPLILLAQNRQDDRDRASLAED HHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHCCEEEEECCCCCCHHHHHHHHH RAAAIRMREDTEFLTREVAALRLAQSDAATRQYVRGELTNQLESLRGDIEALLRMVLQPT HHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAAHPLAATPNGSAQRPARGGVAWPSVPGTSTVATLTVDEPAHAHPTASADAPADHAGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC DTATVPEPALVVVPAPGALSPDGAATQGHLLVPARSGSRAGRKVPIRPTRARIRDT CCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA