| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317699
Identifier: 158317699
GI number: 158317699
Start: 7261100
End: 7261339
Strand: Reverse
Name: 158317699
Synonym: Franean1_5957
Alternate gene names: NA
Gene position: 7261339-7261100 (Counterclockwise)
Preceding gene: 158317700
Following gene: 158317698
Centisome position: 80.84
GC content: 68.75
Gene sequence:
>240_bases ATGGCTAGGCTGATCTCCATGGAGCGAGCGGCGCGGCTGACGGCTGTCGTCACGCATGAGGGCGACTGGTACGTGGCGCG GGCCCTGGAGGTCGAGGTGACCAGCCAGGGCGGCAGCGTCGAGGAGTCGCTGGCGAATCTTCGCGAGGCGTTGGAGCTGT ACTTCGAGGACCAGCCCTTCCCCGTGACTGCCGCGGACGGCCCCATCGTCGCTCCGCTGGACATCCGCCTGTCGGCGTGA
Upstream 100 bases:
>100_bases TACCGGGCTGTTGGAGATCGTTTCCGCTCGTATGGTCGACAGAGGTCCAGTTGATCATCCCGAGGGGGTGGCGGTGAGTA CTTCGCAAGGTGCGGCCGGT
Downstream 100 bases:
>100_bases TGCCTGCCCTGCCCCGGGTCTCCGGGGCGAAGGTTGTGACGGCTCTGGGGCGTGCCGGCTTCGAGGAGGTCGCCACGCGT GGCTCGCACTGCAAGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MARLISMERAARLTAVVTHEGDWYVARALEVEVTSQGGSVEESLANLREALELYFEDQPFPVTAADGPIVAPLDIRLSA
Sequences:
>Translated_79_residues MARLISMERAARLTAVVTHEGDWYVARALEVEVTSQGGSVEESLANLREALELYFEDQPFPVTAADGPIVAPLDIRLSA >Mature_78_residues ARLISMERAARLTAVVTHEGDWYVARALEVEVTSQGGSVEESLANLREALELYFEDQPFPVTAADGPIVAPLDIRLSA
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8615; Mature: 8484
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLISMERAARLTAVVTHEGDWYVARALEVEVTSQGGSVEESLANLREALELYFEDQPF CCCCHHHHHHCEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC PVTAADGPIVAPLDIRLSA EEEECCCCEEEEEEEEEEC >Mature Secondary Structure ARLISMERAARLTAVVTHEGDWYVARALEVEVTSQGGSVEESLANLREALELYFEDQPF CCCHHHHHHCEEEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC PVTAADGPIVAPLDIRLSA EEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA