| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317698
Identifier: 158317698
GI number: 158317698
Start: 7260876
End: 7261100
Strand: Reverse
Name: 158317698
Synonym: Franean1_5956
Alternate gene names: NA
Gene position: 7261100-7260876 (Counterclockwise)
Preceding gene: 158317699
Following gene: 158317697
Centisome position: 80.84
GC content: 68.44
Gene sequence:
>225_bases ATGCCTGCCCTGCCCCGGGTCTCCGGGGCGAAGGTTGTGACGGCTCTGGGGCGTGCCGGCTTCGAGGAGGTCGCCACGCG TGGCTCGCACTGCAAGCTGCGGCACAAGGAGAACGCCCGGGTTGTGATCGTCCCGCTTCATCGGGAGCTGGCGACAGGCA CCCTCGCCTCTGTTCTGCGCCAGGCGGGCATCGAGGCGGAGGAGCTTAGGACGTTGCTCACCTGA
Upstream 100 bases:
>100_bases TTCGCGAGGCGTTGGAGCTGTACTTCGAGGACCAGCCCTTCCCCGTGACTGCCGCGGACGGCCCCATCGTCGCTCCGCTG GACATCCGCCTGTCGGCGTG
Downstream 100 bases:
>100_bases GCCCAGCGCGATCCCGGGTGCAAGCTGGATGGGTGACTCTGTCGAAGCGTGCGTCCTGGTTCCTGATCGCTGTTGGTGTG TGGACGTGGGCGATCTGGCC
Product: YcfA family protein
Products: NA
Alternate protein names: YcfA-Like Protein; YcfA-Like
Number of amino acids: Translated: 74; Mature: 73
Protein sequence:
>74_residues MPALPRVSGAKVVTALGRAGFEEVATRGSHCKLRHKENARVVIVPLHRELATGTLASVLRQAGIEAEELRTLLT
Sequences:
>Translated_74_residues MPALPRVSGAKVVTALGRAGFEEVATRGSHCKLRHKENARVVIVPLHRELATGTLASVLRQAGIEAEELRTLLT >Mature_73_residues PALPRVSGAKVVTALGRAGFEEVATRGSHCKLRHKENARVVIVPLHRELATGTLASVLRQAGIEAEELRTLLT
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7954; Mature: 7823
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALPRVSGAKVVTALGRAGFEEVATRGSHCKLRHKENARVVIVPLHRELATGTLASVLR CCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHH QAGIEAEELRTLLT HCCCCHHHHHHHCC >Mature Secondary Structure PALPRVSGAKVVTALGRAGFEEVATRGSHCKLRHKENARVVIVPLHRELATGTLASVLR CCCCCCCCHHHHHHHHHCCHHHHHCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHH QAGIEAEELRTLLT HCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA