| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317700
Identifier: 158317700
GI number: 158317700
Start: 7261691
End: 7262260
Strand: Reverse
Name: 158317700
Synonym: Franean1_5958
Alternate gene names: NA
Gene position: 7262260-7261691 (Counterclockwise)
Preceding gene: 158317701
Following gene: 158317699
Centisome position: 80.85
GC content: 67.02
Gene sequence:
>570_bases GTGACTAGGGAGATCGCAGTGATCGTGCGGCGGGACGGTGAGTCCTGGTCGGCGTGGTCGCCGCAGTGCCCTGGTCTTGC GGTTGCGGAGCCGACCGCGGCGGAGCTGCGCGGGGCCTTGCCCGAGGCGCTGACCTGGTACTTCGACGGAGACTCCGACT TCGAGATCTTCGTTCATCTTGAGCAGGAGCTGCGCGGGGTCGTTGTTCGGATCGCTCAGGATGCCTTCGGGTGGGAGCGG CAGTTGGTCGCAGAGCGACTGGGGGCTGCGCTCGGTGTCGAGGACCAGGCAGAGCGGCTGCGTGCGGCGCCACCGAACTC TGCGGGGGAGGTCGTTTACGTCTGTGCGCTGCCGACCGACCCGATCTCCTGGCTGACGGCTCAGATCGACGACGTCACCG ATCCAGTTGTCGTCGCGCTTCCCGCGGCAGAGTCGATGTTGTGGACCCTGCAGTTCGGTACCGGGAACCGCGCCGGCGCT GGGTCGGTTGACGTCGGCTACCTGCCAGACACGACATTCGGCGAGGTCATGACGACATTCACCGGGCCCGGGCTGAAGCT CAGCGCGTAG
Upstream 100 bases:
>100_bases GCGTTCCACGATCGTGTGACTGTTGGTCCGGGCCTGGTTCGTCAGATACTGGTCAAGCAGGTGGGCCTGACCGTGGAGGA GGCTCTGAAGGTGATCCGCG
Downstream 100 bases:
>100_bases GGGCCGCGGTGATCCGGACACAAAATGTGGCTGTGTCCGCCGTGCTCGACCTCACGTGGTGCGACCACTCTTGATCGGTT GGGGCTTCTCGCTCGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTREIAVIVRRDGESWSAWSPQCPGLAVAEPTAAELRGALPEALTWYFDGDSDFEIFVHLEQELRGVVVRIAQDAFGWER QLVAERLGAALGVEDQAERLRAAPPNSAGEVVYVCALPTDPISWLTAQIDDVTDPVVVALPAAESMLWTLQFGTGNRAGA GSVDVGYLPDTTFGEVMTTFTGPGLKLSA
Sequences:
>Translated_189_residues MTREIAVIVRRDGESWSAWSPQCPGLAVAEPTAAELRGALPEALTWYFDGDSDFEIFVHLEQELRGVVVRIAQDAFGWER QLVAERLGAALGVEDQAERLRAAPPNSAGEVVYVCALPTDPISWLTAQIDDVTDPVVVALPAAESMLWTLQFGTGNRAGA GSVDVGYLPDTTFGEVMTTFTGPGLKLSA >Mature_188_residues TREIAVIVRRDGESWSAWSPQCPGLAVAEPTAAELRGALPEALTWYFDGDSDFEIFVHLEQELRGVVVRIAQDAFGWERQ LVAERLGAALGVEDQAERLRAAPPNSAGEVVYVCALPTDPISWLTAQIDDVTDPVVVALPAAESMLWTLQFGTGNRAGAG SVDVGYLPDTTFGEVMTTFTGPGLKLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20291; Mature: 20160
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREIAVIVRRDGESWSAWSPQCPGLAVAEPTAAELRGALPEALTWYFDGDSDFEIFVHL CCCEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEEE EQELRGVVVRIAQDAFGWERQLVAERLGAALGVEDQAERLRAAPPNSAGEVVYVCALPTD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCC PISWLTAQIDDVTDPVVVALPAAESMLWTLQFGTGNRAGAGSVDVGYLPDTTFGEVMTTF CHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHH TGPGLKLSA CCCCEEECC >Mature Secondary Structure TREIAVIVRRDGESWSAWSPQCPGLAVAEPTAAELRGALPEALTWYFDGDSDFEIFVHL CCEEEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCEEEEECCCCCEEEEEEE EQELRGVVVRIAQDAFGWERQLVAERLGAALGVEDQAERLRAAPPNSAGEVVYVCALPTD HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCC PISWLTAQIDDVTDPVVVALPAAESMLWTLQFGTGNRAGAGSVDVGYLPDTTFGEVMTTF CHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHH TGPGLKLSA CCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA