| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is add5 [H]
Identifier: 158317675
GI number: 158317675
Start: 7205853
End: 7206947
Strand: Reverse
Name: add5 [H]
Synonym: Franean1_5933
Alternate gene names: 158317675
Gene position: 7206947-7205853 (Counterclockwise)
Preceding gene: 158317676
Following gene: 158317674
Centisome position: 80.24
GC content: 69.5
Gene sequence:
>1095_bases GTGGACATCCCTGCTGGCCAGGCCAGCGAGAAGATCACTGAGGCTGCGATCCGCCGGGTTCCCAAGGTCCTGCTGCACGA TCATCTTGATGGTGGCCTGCGGCCCGCGACCATCGTCGAGCTGGCTGACGCCACCGGGTACACCAGGCTGCCGACGACCG ATGTCGACAAGCTCGGTACCTGGTTCCGCGGAGGTGCGCACACCGGGTCGCTCGTGCGGTACCTGGAGACGTTCAGCCAC ACGGTGGGCGTCATGCAGACGCCCGAGGCCGTGGCCCGGGTGGCCCGCGAGTGCGCCGAGGATCTGGCCGCCGACGGGGT CGTCTACGCGGAGGTCCGGTTCGCCCCGGAGCTCCACGTCGAGCAGGGCATGTCGCTCGACGAGGTGGTCGAGGCCGCGT TGGACGGCTTCCGCGCCGGCTCGGCGGGAACCGGCCTGCACGTGCGCGCGCTGGTGACCGCCATGCGCCACCAGGCCCGC TCGTTGGAGATCGCGGAGCTGGCCGTCCGGTGGCGGGAGGCCGGGGTGGTCGGGTTCGACATCGCCGGGGCGGAGGCGGG CAACCCGCCGACCCGCCACCTGGACGCGTTCCAGTACATCCAGCGGGCGAACGGGCACTTCACGATCCACGCGGGTGAGG CGTTCGGGCTGCCGTCGATCTGGGAGGCGCTGCAGTGGTGCAACGCCGACCGGCTGGGGCACGGCGTGCGCATCGTCGAC GACATCACGGTCGACCCGGACGGAAACGCCACCCTCGGGGATCTGGCCGACTATGTGCGCGATGTCCGTGTCCCGCTGGA GATGTGCCCGTCGTCGAACGTGCACACCGGGGCGGCGCCGAGCATCGAGCGCCATCCGATCGGTCTGCTGCGCAGGCTGC ACTTCCGGGTCACGGTGAACACCGACAACCGGCTGATGAGCGGGGTGACGCTGTCCAGCGAGTTCGCGACCCTGGTCGAG ACGTTCGGCTACGGCTGGTCCGACATCCGCTGGCTGACCGTGAACGCGATGAAGTCTGCCTTCCTCCCATTTGACCAGCG TCTCGCGCTGATCAACGAGGTCATCAAGCCCGGCTTCGAGGGGCTCGTCCCGTGA
Upstream 100 bases:
>100_bases AGGCGGTGCGGGTGCGGTGGATTGGGGCGCGGTGTCTGCTCGTCGTCATGTGGCGGACGGCGAACTGTCGGTGGGGTGGC CTACCGTCAGGGAGGTGAGC
Downstream 100 bases:
>100_bases CCGGGTTGTCCGACCTGGCAGCCGGGGTGGACGGGCGGTCGCGGTGTCCCTGGGGGCTGTCGACGCCGCTGTACGTCGAG TACCACGACACCGAGTGGGG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase 5 [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MDIPAGQASEKITEAAIRRVPKVLLHDHLDGGLRPATIVELADATGYTRLPTTDVDKLGTWFRGGAHTGSLVRYLETFSH TVGVMQTPEAVARVARECAEDLAADGVVYAEVRFAPELHVEQGMSLDEVVEAALDGFRAGSAGTGLHVRALVTAMRHQAR SLEIAELAVRWREAGVVGFDIAGAEAGNPPTRHLDAFQYIQRANGHFTIHAGEAFGLPSIWEALQWCNADRLGHGVRIVD DITVDPDGNATLGDLADYVRDVRVPLEMCPSSNVHTGAAPSIERHPIGLLRRLHFRVTVNTDNRLMSGVTLSSEFATLVE TFGYGWSDIRWLTVNAMKSAFLPFDQRLALINEVIKPGFEGLVP
Sequences:
>Translated_364_residues MDIPAGQASEKITEAAIRRVPKVLLHDHLDGGLRPATIVELADATGYTRLPTTDVDKLGTWFRGGAHTGSLVRYLETFSH TVGVMQTPEAVARVARECAEDLAADGVVYAEVRFAPELHVEQGMSLDEVVEAALDGFRAGSAGTGLHVRALVTAMRHQAR SLEIAELAVRWREAGVVGFDIAGAEAGNPPTRHLDAFQYIQRANGHFTIHAGEAFGLPSIWEALQWCNADRLGHGVRIVD DITVDPDGNATLGDLADYVRDVRVPLEMCPSSNVHTGAAPSIERHPIGLLRRLHFRVTVNTDNRLMSGVTLSSEFATLVE TFGYGWSDIRWLTVNAMKSAFLPFDQRLALINEVIKPGFEGLVP >Mature_364_residues MDIPAGQASEKITEAAIRRVPKVLLHDHLDGGLRPATIVELADATGYTRLPTTDVDKLGTWFRGGAHTGSLVRYLETFSH TVGVMQTPEAVARVARECAEDLAADGVVYAEVRFAPELHVEQGMSLDEVVEAALDGFRAGSAGTGLHVRALVTAMRHQAR SLEIAELAVRWREAGVVGFDIAGAEAGNPPTRHLDAFQYIQRANGHFTIHAGEAFGLPSIWEALQWCNADRLGHGVRIVD DITVDPDGNATLGDLADYVRDVRVPLEMCPSSNVHTGAAPSIERHPIGLLRRLHFRVTVNTDNRLMSGVTLSSEFATLVE TFGYGWSDIRWLTVNAMKSAFLPFDQRLALINEVIKPGFEGLVP
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=353, Percent_Identity=29.4617563739377, Blast_Score=145, Evalue=8e-35, Organism=Homo sapiens, GI61175224, Length=254, Percent_Identity=25.1968503937008, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1787910, Length=337, Percent_Identity=30.2670623145401, Blast_Score=150, Evalue=1e-37, Organism=Caenorhabditis elegans, GI32565969, Length=344, Percent_Identity=29.6511627906977, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17538512, Length=344, Percent_Identity=29.6511627906977, Blast_Score=122, Evalue=3e-28, Organism=Drosophila melanogaster, GI24645260, Length=353, Percent_Identity=25.2124645892351, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 39599; Mature: 39599
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPAGQASEKITEAAIRRVPKVLLHDHLDGGLRPATIVELADATGYTRLPTTDVDKLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCCCCHHHHHH WFRGGAHTGSLVRYLETFSHTVGVMQTPEAVARVARECAEDLAADGVVYAEVRFAPELHV HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHH EQGMSLDEVVEAALDGFRAGSAGTGLHVRALVTAMRHQARSLEIAELAVRWREAGVVGFD HCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEE IAGAEAGNPPTRHLDAFQYIQRANGHFTIHAGEAFGLPSIWEALQWCNADRLGHGVRIVD ECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHHCCCCEEEEE DITVDPDGNATLGDLADYVRDVRVPLEMCPSSNVHTGAAPSIERHPIGLLRRLHFRVTVN EEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEC TDNRLMSGVTLSSEFATLVETFGYGWSDIRWLTVNAMKSAFLPFDQRLALINEVIKPGFE CCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCC GLVP CCCC >Mature Secondary Structure MDIPAGQASEKITEAAIRRVPKVLLHDHLDGGLRPATIVELADATGYTRLPTTDVDKLGT CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCCCCCHHHHHH WFRGGAHTGSLVRYLETFSHTVGVMQTPEAVARVARECAEDLAADGVVYAEVRFAPELHV HHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHH EQGMSLDEVVEAALDGFRAGSAGTGLHVRALVTAMRHQARSLEIAELAVRWREAGVVGFD HCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEEE IAGAEAGNPPTRHLDAFQYIQRANGHFTIHAGEAFGLPSIWEALQWCNADRLGHGVRIVD ECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCHHHCCCCEEEEE DITVDPDGNATLGDLADYVRDVRVPLEMCPSSNVHTGAAPSIERHPIGLLRRLHFRVTVN EEEECCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEC TDNRLMSGVTLSSEFATLVETFGYGWSDIRWLTVNAMKSAFLPFDQRLALINEVIKPGFE CCCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCC GLVP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]