| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tag [H]
Identifier: 158317674
GI number: 158317674
Start: 7205230
End: 7205856
Strand: Reverse
Name: tag [H]
Synonym: Franean1_5932
Alternate gene names: 158317674
Gene position: 7205856-7205230 (Counterclockwise)
Preceding gene: 158317675
Following gene: 158317671
Centisome position: 80.23
GC content: 74.64
Gene sequence:
>627_bases GTGACCGGGTTGTCCGACCTGGCAGCCGGGGTGGACGGGCGGTCGCGGTGTCCCTGGGGGCTGTCGACGCCGCTGTACGT CGAGTACCACGACACCGAGTGGGGCCGGCCCGTTCGGGACACTGTCGGCCTGTTCGAGCGGATGACGCTGGAGGCGTTCC AGTCCGGGCTGTCGTGGCTGACGATCCTGCGCAAGCGTCCGGCGTTCCGGGCGGCGTTCGCGGGGTTCGATCCGGCCGCC GTCGCCGCGTTCGGCGCGGGCACGGTCGAGGAACTTCTCCTGGACGCCGGCATCGTCCGCAACCGGCGCAAGATCGAGGC GACGATCGCGAACGCCCGCGCGGTGCTCGCCCTGACCGAGCCGCTGGAGGAGCTGGTCTGGTCGTTCGCGCCGCCGTCCC GTCCGGCCCCGGTCCGGCTCGCCGACGTCCCGGCGGTGACCGCCGAGTCCAAGGCGCTGGCGAAGGCGCTGCGGGGGCAC GGCTTCGTCTTCGTCGGCCCGACCACCGCGTATGCGCTCATGCAGGCGTGCGGGCTGGTGAACGACCACCTCGCCGGCTG CGCGGCGCGGGACGCGGCCGTCGAGCCCGCCGCCCAGGCCGCCGGGCTGACCGCGCCTGCGGGCTGA
Upstream 100 bases:
>100_bases GGCTGACCGTGAACGCGATGAAGTCTGCCTTCCTCCCATTTGACCAGCGTCTCGCGCTGATCAACGAGGTCATCAAGCCC GGCTTCGAGGGGCTCGTCCC
Downstream 100 bases:
>100_bases CCGCATCCCCGGCAGCCCGCCGGGTCAGGTCATCCAGCTGCGGGGGCCGAAGGTCTGGACGGAGCGGGCGGCGACCCGTG AGGCCTCGCCGAGGGCTCCG
Product: DNA-3-methyladenine glycosylase I
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosylase I, constitutive; TAG I; DNA-3-methyladenine glycosidase I; DNA-3-methyladenine glycosylase I [H]
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTGLSDLAAGVDGRSRCPWGLSTPLYVEYHDTEWGRPVRDTVGLFERMTLEAFQSGLSWLTILRKRPAFRAAFAGFDPAA VAAFGAGTVEELLLDAGIVRNRRKIEATIANARAVLALTEPLEELVWSFAPPSRPAPVRLADVPAVTAESKALAKALRGH GFVFVGPTTAYALMQACGLVNDHLAGCAARDAAVEPAAQAAGLTAPAG
Sequences:
>Translated_208_residues MTGLSDLAAGVDGRSRCPWGLSTPLYVEYHDTEWGRPVRDTVGLFERMTLEAFQSGLSWLTILRKRPAFRAAFAGFDPAA VAAFGAGTVEELLLDAGIVRNRRKIEATIANARAVLALTEPLEELVWSFAPPSRPAPVRLADVPAVTAESKALAKALRGH GFVFVGPTTAYALMQACGLVNDHLAGCAARDAAVEPAAQAAGLTAPAG >Mature_207_residues TGLSDLAAGVDGRSRCPWGLSTPLYVEYHDTEWGRPVRDTVGLFERMTLEAFQSGLSWLTILRKRPAFRAAFAGFDPAAV AAFGAGTVEELLLDAGIVRNRRKIEATIANARAVLALTEPLEELVWSFAPPSRPAPVRLADVPAVTAESKALAKALRGHG FVFVGPTTAYALMQACGLVNDHLAGCAARDAAVEPAAQAAGLTAPAG
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=180, Percent_Identity=50, Blast_Score=187, Evalue=3e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 21897; Mature: 21766
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLSDLAAGVDGRSRCPWGLSTPLYVEYHDTEWGRPVRDTVGLFERMTLEAFQSGLSWL CCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TILRKRPAFRAAFAGFDPAAVAAFGAGTVEELLLDAGIVRNRRKIEATIANARAVLALTE HHHHHCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHEEHHHH PLEELVWSFAPPSRPAPVRLADVPAVTAESKALAKALRGHGFVFVGPTTAYALMQACGLV HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHH NDHLAGCAARDAAVEPAAQAAGLTAPAG HHHHHHHHHHHHHCCHHHHHCCCCCCCC >Mature Secondary Structure TGLSDLAAGVDGRSRCPWGLSTPLYVEYHDTEWGRPVRDTVGLFERMTLEAFQSGLSWL CCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TILRKRPAFRAAFAGFDPAAVAAFGAGTVEELLLDAGIVRNRRKIEATIANARAVLALTE HHHHHCCHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHEEHHHH PLEELVWSFAPPSRPAPVRLADVPAVTAESKALAKALRGHGFVFVGPTTAYALMQACGLV HHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHH NDHLAGCAARDAAVEPAAQAAGLTAPAG HHHHHHHHHHHHHCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3536912; 3520491; 8041620; 9278503 [H]