| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317671
Identifier: 158317671
GI number: 158317671
Start: 7201699
End: 7202139
Strand: Reverse
Name: 158317671
Synonym: Franean1_5929
Alternate gene names: NA
Gene position: 7202139-7201699 (Counterclockwise)
Preceding gene: 158317674
Following gene: 158317667
Centisome position: 80.18
GC content: 69.61
Gene sequence:
>441_bases ATGACGAAGTACGCCGCCTACGCGAGCAACCTCGATCCGGCGCACATGAAGCAGCGCACGCCGCACTCCCCGGTGATCGG CACCGGGTGGATCAGGGGCTGGCGCCTGACCTTCGGCGGTGAGAACGTCGGCTGGGACGGAGCGCTGGCGACCATCGTCG AGGCGCCCGGCGCCCACGTGTACGTCCTGCTGTACGACCTCGACCGCTACGACCTGGAGCGGCTCGACATCTGGGAGGGC GCCGACACCGGCCTCTACACCCGCATCCGGGTGCGGGTGTCGACCCTGGACGGCGAGAGCCTGGCCTGGACGTACGTGCT GAACACCTACGAGGGCGGGCTGCCGTCGCGCAACTACCTCGACATGATCGCGGACGCGGCCGAGAAGGCCGGTGCCCCCT CCGAGTACGTCACCGAGCTCCGTGGACGCCCGATCGCCTGA
Upstream 100 bases:
>100_bases TGACGTCGGTCCATCCCCGTGACGCCGGTGGCCGCACCCGGCGTGGAAGCCACCCCCGCGCTCTCGCACCGGGCGGGGGA GATCGGAAGAGACCCCGACG
Downstream 100 bases:
>100_bases TCCGGGCCTGCCCGGCCTGCCCGGCCGGGCAGCACCGGACGACCTGGCCTAGGCCAGGTCGTCCGGGCCCACCGGGTCGG CCGAGCGGTCGAGCAGCTCA
Product: AIG2 family protein
Products: NA
Alternate protein names: AIG2-Like Family Protein
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTKYAAYASNLDPAHMKQRTPHSPVIGTGWIRGWRLTFGGENVGWDGALATIVEAPGAHVYVLLYDLDRYDLERLDIWEG ADTGLYTRIRVRVSTLDGESLAWTYVLNTYEGGLPSRNYLDMIADAAEKAGAPSEYVTELRGRPIA
Sequences:
>Translated_146_residues MTKYAAYASNLDPAHMKQRTPHSPVIGTGWIRGWRLTFGGENVGWDGALATIVEAPGAHVYVLLYDLDRYDLERLDIWEG ADTGLYTRIRVRVSTLDGESLAWTYVLNTYEGGLPSRNYLDMIADAAEKAGAPSEYVTELRGRPIA >Mature_145_residues TKYAAYASNLDPAHMKQRTPHSPVIGTGWIRGWRLTFGGENVGWDGALATIVEAPGAHVYVLLYDLDRYDLERLDIWEGA DTGLYTRIRVRVSTLDGESLAWTYVLNTYEGGLPSRNYLDMIADAAEKAGAPSEYVTELRGRPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13129018, Length=143, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI221512794, Length=156, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358157, Length=155, Percent_Identity=32.258064516129, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16222; Mature: 16091
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYAAYASNLDPAHMKQRTPHSPVIGTGWIRGWRLTFGGENVGWDGALATIVEAPGAHV CCCCCCCCCCCCHHHHHCCCCCCCEEECCCEEEEEEEECCCCCCCCHHHEEEEECCCCEE YVLLYDLDRYDLERLDIWEGADTGLYTRIRVRVSTLDGESLAWTYVLNTYEGGLPSRNYL EEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHH DMIADAAEKAGAPSEYVTELRGRPIA HHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure TKYAAYASNLDPAHMKQRTPHSPVIGTGWIRGWRLTFGGENVGWDGALATIVEAPGAHV CCCCCCCCCCCHHHHHCCCCCCCEEECCCEEEEEEEECCCCCCCCHHHEEEEECCCCEE YVLLYDLDRYDLERLDIWEGADTGLYTRIRVRVSTLDGESLAWTYVLNTYEGGLPSRNYL EEEEEECCCCCCCEEEECCCCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCHHH DMIADAAEKAGAPSEYVTELRGRPIA HHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA