| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pgm [C]
Identifier: 158317665
GI number: 158317665
Start: 7193241
End: 7195034
Strand: Reverse
Name: pgm [C]
Synonym: Franean1_5923
Alternate gene names: 158317665
Gene position: 7195034-7193241 (Counterclockwise)
Preceding gene: 158317667
Following gene: 158317663
Centisome position: 80.1
GC content: 76.64
Gene sequence:
>1794_bases GTGACGACCGCCCGTGACGACTCGACACCGAACCAGGCCGGACGGGCCTCGGGCCGGAAGGAACCGGGCCGTCGGGCGGG TGGGGCGTGCCGGCATTCTGGTGGAGCCATGACCGCCCCCGTCTGCGGGCTGCCCGAGCCGCTGCCGGCACGGGTCGCGG CCTGGCTTGCTGCGGACCCGGACCCCGGCGACCGGGCCGAGCTCGCCCGGCTGGTGGCCGCGGGCGACACCCGCGAGCTC ACCGAGCGTTTCACCGGACCGCTCGCCTTCGGCACCGCGGGGCTGCGCGGGCCGCTGCGGGCCGGGCCGGCCGGGATGAA CACCGCCGTGGTGCGGCGGACCACCGCCGGCCTCGGCTCCTGGCTACGGCGCCGCGTGACCGGGCCGCCGGTGGTGGTGA TCGGATACGACGCCCGCCGGCGCAGCGACCACTTCGCCCTCGACGCGGCCCGGGTGCTGGCCGGGCAGGGCGTCCGGGCG CTGGTCCTCCCAGAGTCGGGGCCCACCCCGGTGCTGGCGTTCGCCGTCCGCCACCTGGACGCGGCGGCCGGAATAATGAT CACGGCGAGTCACAATCCGGCGTCCGACAACGGCTACAAGGTCTATCTCGGCGGTTCCGTGGGTGAGGCGGGGCGGGGCG CCCAGCTCGTCGCCCCGGCTGACACCGAGATCGAGCACGAGATCGCCGCGGTCGGCCCGGCCGCTGCGATCCCGCTCGCC GACGGCTGGACCCGTCTCGACGCCTCGGTCGTCACCGCATACGTCGAGGGCGCGGTGCGCGCGGTCGACACCGCCGCGCC GGTGGACGGGCCGCCACTGCGGATCGCCTATACGCCGCTGCACGGCGTCGGCGCCGACGTCCTGGCCGCGGTGTTCGCCC GCGCCGGCCTGCCCGTCCCGGTGCCCGTTGCCGCCCAGCGAGCCCCGGATCCCGACTTCCCCACGGCGCCGTTCCCGAAC CCGGAGGAGCCCGGGGTGCTCGACGCCGTGCTGGCCCTGGGCGAGCGGGTGGGCGCCGACCTGGTGCTCGCGAACGACCC GGACGCCGACCGGTGCGCCGCGGCGGTCGGCGGCCGGGTGCTGACCGGGGATGAGATCGGGCTGCTGCTGGCCGACCACG TCCTGCGGGCGCGGCCCGGACCGGTCGCGACGACCGTGGTCAGCTCCTCGGCCCTGGCGGAGCTCGCCCGCGACCACGGC GTGCCCTGTGCCCAGACCCTGACCGGCTTCAAATGGATCATGCGTGCCGATCCCGGCCTCGTGTTCGGCTACGAGGAGGC CCTCGGCTACGCCGTGGCCCCCGACCTGGTGCGGGACAAGGACGGCATCACCGCCGCGCTGGCCCTCGCGCGGGCCGCCC AGCGCGAGAAACGCGCCGGGCGCACCCTGCTGGACGTCCTCGACGACCTGCACCGCCGCATCGGCGTGTTCGCCACCGGC CAGGTGTCCGTCCGCCTCGACGATCTCGCGGCCGTCGCCGCGGCGATGCGCCGGCTGCGGACGTCCCCGCCCGACCGCGT CGCCGGCCGTCCCGTGACCGCCGTCCGGGACCTGCTCACCGGCGCGGTGGACGGTCTCCCGCCCGCGGACGTCCTGATCT TCGACCTGGACGGCGGAGCGCGGCTCGTAGCCCGGCCGAGCGGCACCGAACCGAAGCTCAAGATCTATCTGCAGGCCGTC GCGGACCGTGCGGCCGTGGCGGCGATCGGCCCGGCCGCCGCGCGCCGCCGTGCCCAGACCCAGTTGGACGCGCTGCGCGA CGCCGCCGCCGACCTGCTGGGCCGCGACCACTAG
Upstream 100 bases:
>100_bases CAGTGGCCCGCCTAACAGCGGACCGCCTGCCCGTGCCCCGCTCCGCGGGAGACCGGATTCCTCCCCGGCCTGAAGGCCAG GGCATCCTCCAGGAGCACTG
Downstream 100 bases:
>100_bases TGCAGGCCGGCCACGAGCGCAGGTGCCGGCAGTGGGCATCGTGGCGTGGCTCGACGCTACCGCCGCGGCGGCCCGGGAGA CGATGATGGGGGCGTGATCC
Product: phosphoglucomutase/phosphomannomutase alpha/beta/subunit
Products: NA
Alternate protein names: PMM [H]
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MTTARDDSTPNQAGRASGRKEPGRRAGGACRHSGGAMTAPVCGLPEPLPARVAAWLAADPDPGDRAELARLVAAGDTREL TERFTGPLAFGTAGLRGPLRAGPAGMNTAVVRRTTAGLGSWLRRRVTGPPVVVIGYDARRRSDHFALDAARVLAGQGVRA LVLPESGPTPVLAFAVRHLDAAAGIMITASHNPASDNGYKVYLGGSVGEAGRGAQLVAPADTEIEHEIAAVGPAAAIPLA DGWTRLDASVVTAYVEGAVRAVDTAAPVDGPPLRIAYTPLHGVGADVLAAVFARAGLPVPVPVAAQRAPDPDFPTAPFPN PEEPGVLDAVLALGERVGADLVLANDPDADRCAAAVGGRVLTGDEIGLLLADHVLRARPGPVATTVVSSSALAELARDHG VPCAQTLTGFKWIMRADPGLVFGYEEALGYAVAPDLVRDKDGITAALALARAAQREKRAGRTLLDVLDDLHRRIGVFATG QVSVRLDDLAAVAAAMRRLRTSPPDRVAGRPVTAVRDLLTGAVDGLPPADVLIFDLDGGARLVARPSGTEPKLKIYLQAV ADRAAVAAIGPAAARRRAQTQLDALRDAAADLLGRDH
Sequences:
>Translated_597_residues MTTARDDSTPNQAGRASGRKEPGRRAGGACRHSGGAMTAPVCGLPEPLPARVAAWLAADPDPGDRAELARLVAAGDTREL TERFTGPLAFGTAGLRGPLRAGPAGMNTAVVRRTTAGLGSWLRRRVTGPPVVVIGYDARRRSDHFALDAARVLAGQGVRA LVLPESGPTPVLAFAVRHLDAAAGIMITASHNPASDNGYKVYLGGSVGEAGRGAQLVAPADTEIEHEIAAVGPAAAIPLA DGWTRLDASVVTAYVEGAVRAVDTAAPVDGPPLRIAYTPLHGVGADVLAAVFARAGLPVPVPVAAQRAPDPDFPTAPFPN PEEPGVLDAVLALGERVGADLVLANDPDADRCAAAVGGRVLTGDEIGLLLADHVLRARPGPVATTVVSSSALAELARDHG VPCAQTLTGFKWIMRADPGLVFGYEEALGYAVAPDLVRDKDGITAALALARAAQREKRAGRTLLDVLDDLHRRIGVFATG QVSVRLDDLAAVAAAMRRLRTSPPDRVAGRPVTAVRDLLTGAVDGLPPADVLIFDLDGGARLVARPSGTEPKLKIYLQAV ADRAAVAAIGPAAARRRAQTQLDALRDAAADLLGRDH >Mature_596_residues TTARDDSTPNQAGRASGRKEPGRRAGGACRHSGGAMTAPVCGLPEPLPARVAAWLAADPDPGDRAELARLVAAGDTRELT ERFTGPLAFGTAGLRGPLRAGPAGMNTAVVRRTTAGLGSWLRRRVTGPPVVVIGYDARRRSDHFALDAARVLAGQGVRAL VLPESGPTPVLAFAVRHLDAAAGIMITASHNPASDNGYKVYLGGSVGEAGRGAQLVAPADTEIEHEIAAVGPAAAIPLAD GWTRLDASVVTAYVEGAVRAVDTAAPVDGPPLRIAYTPLHGVGADVLAAVFARAGLPVPVPVAAQRAPDPDFPTAPFPNP EEPGVLDAVLALGERVGADLVLANDPDADRCAAAVGGRVLTGDEIGLLLADHVLRARPGPVATTVVSSSALAELARDHGV PCAQTLTGFKWIMRADPGLVFGYEEALGYAVAPDLVRDKDGITAALALARAAQREKRAGRTLLDVLDDLHRRIGVFATGQ VSVRLDDLAAVAAAMRRLRTSPPDRVAGRPVTAVRDLLTGAVDGLPPADVLIFDLDGGARLVARPSGTEPKLKIYLQAVA DRAAVAAIGPAAARRRAQTQLDALRDAAADLLGRDH
Specific function: This Enzyme Participates In Both The Breakdown And Synthesis Of Glucose. [C]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=572, Percent_Identity=31.8181818181818, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI31377548, Length=572, Percent_Identity=30.9440559440559, Blast_Score=241, Evalue=2e-63, Organism=Escherichia coli, GI1786904, Length=523, Percent_Identity=26.1950286806883, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788361, Length=300, Percent_Identity=29.6666666666667, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789566, Length=411, Percent_Identity=27.2506082725061, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71993870, Length=564, Percent_Identity=32.8014184397163, Blast_Score=255, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71993878, Length=330, Percent_Identity=35.7575757575758, Blast_Score=189, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6323934, Length=603, Percent_Identity=32.0066334991708, Blast_Score=264, Evalue=3e-71, Organism=Drosophila melanogaster, GI20129809, Length=591, Percent_Identity=31.6412859560068, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24651977, Length=546, Percent_Identity=31.8681318681319, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24653722, Length=578, Percent_Identity=29.4117647058824, Blast_Score=184, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.8 [H]
Molecular weight: Translated: 61540; Mature: 61408
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARDDSTPNQAGRASGRKEPGRRAGGACRHSGGAMTAPVCGLPEPLPARVAAWLAADP CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DPGDRAELARLVAAGDTRELTERFTGPLAFGTAGLRGPLRAGPAGMNTAVVRRTTAGLGS CCCCHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH WLRRRVTGPPVVVIGYDARRRSDHFALDAARVLAGQGVRALVLPESGPTPVLAFAVRHLD HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH AAAGIMITASHNPASDNGYKVYLGGSVGEAGRGAQLVAPADTEIEHEIAAVGPAAAIPLA HHCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHCCCCC DGWTRLDASVVTAYVEGAVRAVDTAAPVDGPPLRIAYTPLHGVGADVLAAVFARAGLPVP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCC VPVAAQRAPDPDFPTAPFPNPEEPGVLDAVLALGERVGADLVLANDPDADRCAAAVGGRV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCEE LTGDEIGLLLADHVLRARPGPVATTVVSSSALAELARDHGVPCAQTLTGFKWIMRADPGL EECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCE VFGYEEALGYAVAPDLVRDKDGITAALALARAAQREKRAGRTLLDVLDDLHRRIGVFATG EEEHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECC QVSVRLDDLAAVAAAMRRLRTSPPDRVAGRPVTAVRDLLTGAVDGLPPADVLIFDLDGGA EEEEEHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC RLVARPSGTEPKLKIYLQAVADRAAVAAIGPAAARRRAQTQLDALRDAAADLLGRDH EEEECCCCCCCHHEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTARDDSTPNQAGRASGRKEPGRRAGGACRHSGGAMTAPVCGLPEPLPARVAAWLAADP CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC DPGDRAELARLVAAGDTRELTERFTGPLAFGTAGLRGPLRAGPAGMNTAVVRRTTAGLGS CCCCHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH WLRRRVTGPPVVVIGYDARRRSDHFALDAARVLAGQGVRALVLPESGPTPVLAFAVRHLD HHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH AAAGIMITASHNPASDNGYKVYLGGSVGEAGRGAQLVAPADTEIEHEIAAVGPAAAIPLA HHCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHCCCCC DGWTRLDASVVTAYVEGAVRAVDTAAPVDGPPLRIAYTPLHGVGADVLAAVFARAGLPVP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCC VPVAAQRAPDPDFPTAPFPNPEEPGVLDAVLALGERVGADLVLANDPDADRCAAAVGGRV CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCEE LTGDEIGLLLADHVLRARPGPVATTVVSSSALAELARDHGVPCAQTLTGFKWIMRADPGL EECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCE VFGYEEALGYAVAPDLVRDKDGITAALALARAAQREKRAGRTLLDVLDDLHRRIGVFATG EEEHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCEEECC QVSVRLDDLAAVAAAMRRLRTSPPDRVAGRPVTAVRDLLTGAVDGLPPADVLIFDLDGGA EEEEEHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCC RLVARPSGTEPKLKIYLQAVADRAAVAAIGPAAARRRAQTQLDALRDAAADLLGRDH EEEECCCCCCCHHEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]