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The map label for this gene is rfbU [H]

Identifier: 158317622

GI number: 158317622

Start: 7135435

End: 7136565

Strand: Reverse

Name: rfbU [H]

Synonym: Franean1_5878

Alternate gene names: 158317622

Gene position: 7136565-7135435 (Counterclockwise)

Preceding gene: 158317623

Following gene: 158317621

Centisome position: 79.45

GC content: 72.94

Gene sequence:

>1131_bases
GTGGGACCCCGGGTGCTCGTTGATGCGACCTCGGTTCCGGCCGACCGCGGTGGTGTCGGGCGGTATGTCGACGGGCTCGT
CGCTGCTCTGGGCGCGGCCGGCGCCGACATGGCGCTGGTGTGCCAGCGATCGGACGAGGAACGTTACAGCCGGATGGCGC
CGCGGGCGACCGTCCTGTCGGGCCCGGCGGCCATCGCGCACCGGCCGGCTCGGCTGGCGTGGGAGCAGACAGGTCTTCCG
CTCGTCGCCGAACAGGTCAATGCGGACGTCATCCACTCGCCGCACTACACGATGCCACTGCGCGCGCAGCGGCCGGTATG
CGTGACGATCCATGACGTCACCTTCTTCACCGAGCCGGAGATGCACACGGCGGTGAAGGGCACGTTCTTCCGGTCGGCGA
TGCGGACGGCGGTGCGCCGGGCGAGCCGCATCATCGTCCCGTCGAAGGCCACGCGCGACGAGCTCGTCCGCGTCCTCGAG
GGCGAGTCGACGACGACCGACGTCGCCTATCACGGGGTGGACACGACCACGTTCCACCCGCCGACGGAGGAGGACCGGCG
CCGGGTGCGGCTGCGCCTCGGCCTCGGTGACACCCGTTACGTGGCCTTCCTCGGAATGCTCGAGCCGCGCAAGAACGTCC
CGAACCTGATTCGCGGCTGGGCGGAGGCGGTGCACTGGCGGGACGAGCCCCCGGCGCTCGTGCTGGCCGGTGGTTCCGGC
TGGGATGACGACGTCGACGCGGCCGTCGCCTCGGTGCCGAGCCATCTGCGGGTGATCCGGCCCGGCTACCTGCGCTTCTC
CGACCTCCCGGGCTACCTGGGCGGTTCGGAGCTGGTCGCCTATCCGTCGCACGGTGAGGGCTTCGGCCTACCGGTGCTGG
AGGCGATGGCCTGCGGCGCCCCCGTGCTGACGACCCCGCGCCTCTCGCTGCCCGAGGTGGGCGGCGACGCGGTCGCCTAC
ACCCAGCCCGACCCGGACTCGATCGCCCGCGAGATGAGCGCGCTGCTCGACGACGCCGAGCGTCGCGCCCAGCTCGCCGC
GGCCGGGCTCGCCCGGTCCCACGAGTTCACCTGGGCGGCCTCCGCGGAGGCCCACCTGGCGAGCTACGCCCGCGCGGTGG
CCGACGCCTGA

Upstream 100 bases:

>100_bases
CCTGCCGTGTCCGTCGCCGACGACGGGCGGGCGTAGTGTTGCCCCCGTTGAGAAGCAAGCGGCCACACTGAATCAGGCGG
CACGTCTCGGAAGGAGCGCC

Downstream 100 bases:

>100_bases
ACCACCCCGGTCCGACGCCTGACCACCCGGCCTACCGGGCCGGTGCGGCGGCCGGCGGCTGACGCGCTACGGTTCCCCGG
TGGACAAGGCGGAGATCCGG

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MGPRVLVDATSVPADRGGVGRYVDGLVAALGAAGADMALVCQRSDEERYSRMAPRATVLSGPAAIAHRPARLAWEQTGLP
LVAEQVNADVIHSPHYTMPLRAQRPVCVTIHDVTFFTEPEMHTAVKGTFFRSAMRTAVRRASRIIVPSKATRDELVRVLE
GESTTTDVAYHGVDTTTFHPPTEEDRRRVRLRLGLGDTRYVAFLGMLEPRKNVPNLIRGWAEAVHWRDEPPALVLAGGSG
WDDDVDAAVASVPSHLRVIRPGYLRFSDLPGYLGGSELVAYPSHGEGFGLPVLEAMACGAPVLTTPRLSLPEVGGDAVAY
TQPDPDSIAREMSALLDDAERRAQLAAAGLARSHEFTWAASAEAHLASYARAVADA

Sequences:

>Translated_376_residues
MGPRVLVDATSVPADRGGVGRYVDGLVAALGAAGADMALVCQRSDEERYSRMAPRATVLSGPAAIAHRPARLAWEQTGLP
LVAEQVNADVIHSPHYTMPLRAQRPVCVTIHDVTFFTEPEMHTAVKGTFFRSAMRTAVRRASRIIVPSKATRDELVRVLE
GESTTTDVAYHGVDTTTFHPPTEEDRRRVRLRLGLGDTRYVAFLGMLEPRKNVPNLIRGWAEAVHWRDEPPALVLAGGSG
WDDDVDAAVASVPSHLRVIRPGYLRFSDLPGYLGGSELVAYPSHGEGFGLPVLEAMACGAPVLTTPRLSLPEVGGDAVAY
TQPDPDSIAREMSALLDDAERRAQLAAAGLARSHEFTWAASAEAHLASYARAVADA
>Mature_375_residues
GPRVLVDATSVPADRGGVGRYVDGLVAALGAAGADMALVCQRSDEERYSRMAPRATVLSGPAAIAHRPARLAWEQTGLPL
VAEQVNADVIHSPHYTMPLRAQRPVCVTIHDVTFFTEPEMHTAVKGTFFRSAMRTAVRRASRIIVPSKATRDELVRVLEG
ESTTTDVAYHGVDTTTFHPPTEEDRRRVRLRLGLGDTRYVAFLGMLEPRKNVPNLIRGWAEAVHWRDEPPALVLAGGSGW
DDDVDAAVASVPSHLRVIRPGYLRFSDLPGYLGGSELVAYPSHGEGFGLPVLEAMACGAPVLTTPRLSLPEVGGDAVAYT
QPDPDSIAREMSALLDDAERRAQLAAAGLARSHEFTWAASAEAHLASYARAVADA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40481; Mature: 40350

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRVLVDATSVPADRGGVGRYVDGLVAALGAAGADMALVCQRSDEERYSRMAPRATVLS
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCEEEC
GPAAIAHRPARLAWEQTGLPLVAEQVNADVIHSPHYTMPLRAQRPVCVTIHDVTFFTEPE
CCHHHHCCCHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEECCC
MHTAVKGTFFRSAMRTAVRRASRIIVPSKATRDELVRVLEGESTTTDVAYHGVDTTTFHP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCC
PTEEDRRRVRLRLGLGDTRYVAFLGMLEPRKNVPNLIRGWAEAVHWRDEPPALVLAGGSG
CCHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCC
WDDDVDAAVASVPSHLRVIRPGYLRFSDLPGYLGGSELVAYPSHGEGFGLPVLEAMACGA
CCHHHHHHHHHCCHHHEEECCCCEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCC
PVLTTPRLSLPEVGGDAVAYTQPDPDSIAREMSALLDDAERRAQLAAAGLARSHEFTWAA
CCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SAEAHLASYARAVADA
CCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GPRVLVDATSVPADRGGVGRYVDGLVAALGAAGADMALVCQRSDEERYSRMAPRATVLS
CCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCEEEC
GPAAIAHRPARLAWEQTGLPLVAEQVNADVIHSPHYTMPLRAQRPVCVTIHDVTFFTEPE
CCHHHHCCCHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCCCCEEEEEEEEEEEECCC
MHTAVKGTFFRSAMRTAVRRASRIIVPSKATRDELVRVLEGESTTTDVAYHGVDTTTFHP
HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCC
PTEEDRRRVRLRLGLGDTRYVAFLGMLEPRKNVPNLIRGWAEAVHWRDEPPALVLAGGSG
CCHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCC
WDDDVDAAVASVPSHLRVIRPGYLRFSDLPGYLGGSELVAYPSHGEGFGLPVLEAMACGA
CCHHHHHHHHHCCHHHEEECCCCEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCC
PVLTTPRLSLPEVGGDAVAYTQPDPDSIAREMSALLDDAERRAQLAAAGLARSHEFTWAA
CCEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
SAEAHLASYARAVADA
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]