| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is wbbL [H]
Identifier: 158317621
GI number: 158317621
Start: 7134444
End: 7135355
Strand: Reverse
Name: wbbL [H]
Synonym: Franean1_5877
Alternate gene names: 158317621
Gene position: 7135355-7134444 (Counterclockwise)
Preceding gene: 158317622
Following gene: 158317620
Centisome position: 79.44
GC content: 72.92
Gene sequence:
>912_bases GTGGACAAGGCGGAGATCCGGGTCATCGTCGTCACCTTCCGTTCCGGGGAGATCATCGGAACCTTCCTGGACTCGCTGAC GAAGTCGACCACCCGCCCCTATGAGGTCGTCGTGGTCGACAACTCGCCGCAGGTGGATGTCGGCACCCGCGCCGCCGGTG AGCGGCCCGAGGTCACCCTGCTGCGCCCCGGCCGCAACCTCGGCTACGGCACCGCGGCGAACCGCGGGGCGGCCGGAGCC TCCGCTCCCTGGCTGCTTGTCGCCAACGCCGACATCGCCTTCGCGCCCGGCAGCCTCGACGAGCTGATCGCCGCCGCCGA CCGCTGGCCCGGTGGCGGCGCCTTCGGGCCCGGTATCACCAACCCGGATGGTGCCCTCTACCCCTCCGCCCGCGACCTGC CCTCCCTCGGACGCGGCATCGGCCACGCCCTGTTCGGCTGGTGCTGGCCGACGAACCCGTGGACGGCGTCCTACCGCCGC GAGCGCGGGGCCCCGCGGGAGATGACGGCCGGCTGGCTTTCCGGTTCCTGCCAGCTGCTGCGCCGGGAGGTCTTCGAGGG CGTCGGCGGTTTCGACGAGTCGTACTTCATGTTCATGGAGGACGTCGACCTGGGCCGCCGCATCGGGCTGGCCGACCAGC AGCTCGTCTACGTGCCGTCGGCGGTCGTCGAGCACCTCGGTGGGCACTCGACGAAGCGGTCGTCGCGGAAGATGGTGGTC GCCCACCACCGGAGCATGATCCGCTACCTGTGCCGGCAGTACGACGGGCCCGGCTACCTGCCGCTGCGCGCGGCGCTCAC CGTCGGCCTCGGCGCGCGGCTGGCGCTGGCGCTGGCGTTCGCGCGCGACAGCGCCGGCGCGCGCGCGACCCGGTCCGCCG AGCTGCTTACCTCCGCCCGCAAGCCACGCTGA
Upstream 100 bases:
>100_bases CGCGCGGTGGCCGACGCCTGAACCACCCCGGTCCGACGCCTGACCACCCGGCCTACCGGGCCGGTGCGGCGGCCGGCGGC TGACGCGCTACGGTTCCCCG
Downstream 100 bases:
>100_bases GGCCACGCCGGCCACTGCGGGACATGAACGCCGACCCGACGATGCGTGTCCAGCCTGTGGCCTCTCGTTGAGCATGGGGG TCACCCGGCCGGGCACACGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase [H]
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MDKAEIRVIVVTFRSGEIIGTFLDSLTKSTTRPYEVVVVDNSPQVDVGTRAAGERPEVTLLRPGRNLGYGTAANRGAAGA SAPWLLVANADIAFAPGSLDELIAAADRWPGGGAFGPGITNPDGALYPSARDLPSLGRGIGHALFGWCWPTNPWTASYRR ERGAPREMTAGWLSGSCQLLRREVFEGVGGFDESYFMFMEDVDLGRRIGLADQQLVYVPSAVVEHLGGHSTKRSSRKMVV AHHRSMIRYLCRQYDGPGYLPLRAALTVGLGARLALALAFARDSAGARATRSAELLTSARKPR
Sequences:
>Translated_303_residues MDKAEIRVIVVTFRSGEIIGTFLDSLTKSTTRPYEVVVVDNSPQVDVGTRAAGERPEVTLLRPGRNLGYGTAANRGAAGA SAPWLLVANADIAFAPGSLDELIAAADRWPGGGAFGPGITNPDGALYPSARDLPSLGRGIGHALFGWCWPTNPWTASYRR ERGAPREMTAGWLSGSCQLLRREVFEGVGGFDESYFMFMEDVDLGRRIGLADQQLVYVPSAVVEHLGGHSTKRSSRKMVV AHHRSMIRYLCRQYDGPGYLPLRAALTVGLGARLALALAFARDSAGARATRSAELLTSARKPR >Mature_303_residues MDKAEIRVIVVTFRSGEIIGTFLDSLTKSTTRPYEVVVVDNSPQVDVGTRAAGERPEVTLLRPGRNLGYGTAANRGAAGA SAPWLLVANADIAFAPGSLDELIAAADRWPGGGAFGPGITNPDGALYPSARDLPSLGRGIGHALFGWCWPTNPWTASYRR ERGAPREMTAGWLSGSCQLLRREVFEGVGGFDESYFMFMEDVDLGRRIGLADQQLVYVPSAVVEHLGGHSTKRSSRKMVV AHHRSMIRYLCRQYDGPGYLPLRAALTVGLGARLALALAFARDSAGARATRSAELLTSARKPR
Specific function: Involved in the biosynthesis of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component the mycobacterial cell wall. Catalyzes the transfer of the rhamnosyl moiety from dTDP-rhamnosyl (dTDP-Rha) onto the undecaprenyl-pyrophosphoryl
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 32614; Mature: 32614
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKAEIRVIVVTFRSGEIIGTFLDSLTKSTTRPYEVVVVDNSPQVDVGTRAAGERPEVTL CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEE LRPGRNLGYGTAANRGAAGASAPWLLVANADIAFAPGSLDELIAAADRWPGGGAFGPGIT ECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCCC NPDGALYPSARDLPSLGRGIGHALFGWCWPTNPWTASYRRERGAPREMTAGWLSGSCQLL CCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH RREVFEGVGGFDESYFMFMEDVDLGRRIGLADQQLVYVPSAVVEHLGGHSTKRSSRKMVV HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCHH AHHRSMIRYLCRQYDGPGYLPLRAALTVGLGARLALALAFARDSAGARATRSAELLTSAR HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC KPR CCC >Mature Secondary Structure MDKAEIRVIVVTFRSGEIIGTFLDSLTKSTTRPYEVVVVDNSPQVDVGTRAAGERPEVTL CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEE LRPGRNLGYGTAANRGAAGASAPWLLVANADIAFAPGSLDELIAAADRWPGGGAFGPGIT ECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCHHHHHHHHCCCCCCCCCCCCCC NPDGALYPSARDLPSLGRGIGHALFGWCWPTNPWTASYRRERGAPREMTAGWLSGSCQLL CCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH RREVFEGVGGFDESYFMFMEDVDLGRRIGLADQQLVYVPSAVVEHLGGHSTKRSSRKMVV HHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCHH AHHRSMIRYLCRQYDGPGYLPLRAALTVGLGARLALALAFARDSAGARATRSAELLTSAR HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC KPR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]