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The map label for this gene is rfbU [H]

Identifier: 158317623

GI number: 158317623

Start: 7136630

End: 7137817

Strand: Reverse

Name: rfbU [H]

Synonym: Franean1_5879

Alternate gene names: 158317623

Gene position: 7137817-7136630 (Counterclockwise)

Preceding gene: 158317624

Following gene: 158317622

Centisome position: 79.47

GC content: 75.34

Gene sequence:

>1188_bases
ATGCGGGTCGGTTTCCTGGTCGAGCAGATTCTGGCGCCGATCCCCGGGGGGACCGGAAGGTACTCCGCGGAGCTCGCCGC
CGCCCTGGCCCGGACGGCGGATCCCGGGGACGGCGTCATCGGGTGGTGTGCCTTCCGGCGTGACACCTCCGCGGCGGCCC
TGCCGGGCGTCCTCGGGCCGCTGCGCCTGGGCCTGCCGCGGCGGGCGCTCGCCGCCGCCTGGGCGCGCGGCGCGGGCCCG
GGCCCGCCCGGGGTGGACGTCGTCCACGCGCCGACGCTGCTCGTGCCCCCACCCGTCCGGCGGGACCGCGTCACCCGTGC
CGCCCGTGCCCGGCCGCGGCTGGTGGTCACCGTGCACGACGCCGTCCCGTGGACCCATCCCGGGACCCTGACGCCGCACG
GGGTCCGCTGGCACCGGGAGATGGGGGAGCGGGTCGCCCGCCACGCCGACGCGGTGATCGTGCCGACCCGGGCCGTCGCG
GCTGACATCCGGGAGCATCTGCCGATTGACGCGCAGCGGCTGCACGTGATCGGTGAGGGGGTCGCCGAGGCGGTGCTGCG
GGTGCCGCCGGACGCCGACCGCCGGGCCGCCCGGCTGGGCCTTCCCGAACGGGGGTATTTGCTCACCCTGGCGACGATGG
AGCCGCGCAAGGGCCTGGACACCCTGCTTGCCGCCCTGCGCCATCCGGACGCCCCCGACCTTCCGCTGGTGCACGTCGGG
GCTGCCGGATGGGGTGATCTCGGCCCCGCCGCGACCGGGCCGGGAGGCTTCGCCGATCTTGCCGCCTCCGGGCGGTTTCT
TGGTCTCGGCCGGATCAGTGACGAAGATCTCGCCGTCGTGCTCTCGCGGGCGACGGTGCTGGTCGCGCCCAGCCGTTCCG
AGGGCTTCGGCCTGCCGGTCATCGAGGCGATGGCACACGGGGTGCCGGTGGTCGTCTCCGACGCGCCGGCTCTTGTCGAG
GTCGCCGGCGACGCGGCACTGGTGGCCCGGATCGGTGATCCGGCCGGCTTCGCCGAGGCGCTCGCGCGTATCGTCCAGAA
TCCCCGGCTACACAGTCGTTTGTCGCGTTCCGGACGGGTCCGCGCGGCGGGATATACCTGGAATGGGGCGGCGCGATCGT
GCTGGGAGCTCTACCGTCGAATCAGCGGCTCCCCTGCCGTGTCCGTCGCCGACGACGGGCGGGCGTAG

Upstream 100 bases:

>100_bases
GCTGCATCGTCATGGTCGTCGCCGGCGTGGCCGCAGCCCGCCGCGACCACTGACCCGACCCCGCCCCGGCACCGGGTGCG
GGGCGGGGGAGACTGGCGGG

Downstream 100 bases:

>100_bases
TGTTGCCCCCGTTGAGAAGCAAGCGGCCACACTGAATCAGGCGGCACGTCTCGGAAGGAGCGCCGTGGGACCCCGGGTGC
TCGTTGATGCGACCTCGGTT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRVGFLVEQILAPIPGGTGRYSAELAAALARTADPGDGVIGWCAFRRDTSAAALPGVLGPLRLGLPRRALAAAWARGAGP
GPPGVDVVHAPTLLVPPPVRRDRVTRAARARPRLVVTVHDAVPWTHPGTLTPHGVRWHREMGERVARHADAVIVPTRAVA
ADIREHLPIDAQRLHVIGEGVAEAVLRVPPDADRRAARLGLPERGYLLTLATMEPRKGLDTLLAALRHPDAPDLPLVHVG
AAGWGDLGPAATGPGGFADLAASGRFLGLGRISDEDLAVVLSRATVLVAPSRSEGFGLPVIEAMAHGVPVVVSDAPALVE
VAGDAALVARIGDPAGFAEALARIVQNPRLHSRLSRSGRVRAAGYTWNGAARSCWELYRRISGSPAVSVADDGRA

Sequences:

>Translated_395_residues
MRVGFLVEQILAPIPGGTGRYSAELAAALARTADPGDGVIGWCAFRRDTSAAALPGVLGPLRLGLPRRALAAAWARGAGP
GPPGVDVVHAPTLLVPPPVRRDRVTRAARARPRLVVTVHDAVPWTHPGTLTPHGVRWHREMGERVARHADAVIVPTRAVA
ADIREHLPIDAQRLHVIGEGVAEAVLRVPPDADRRAARLGLPERGYLLTLATMEPRKGLDTLLAALRHPDAPDLPLVHVG
AAGWGDLGPAATGPGGFADLAASGRFLGLGRISDEDLAVVLSRATVLVAPSRSEGFGLPVIEAMAHGVPVVVSDAPALVE
VAGDAALVARIGDPAGFAEALARIVQNPRLHSRLSRSGRVRAAGYTWNGAARSCWELYRRISGSPAVSVADDGRA
>Mature_395_residues
MRVGFLVEQILAPIPGGTGRYSAELAAALARTADPGDGVIGWCAFRRDTSAAALPGVLGPLRLGLPRRALAAAWARGAGP
GPPGVDVVHAPTLLVPPPVRRDRVTRAARARPRLVVTVHDAVPWTHPGTLTPHGVRWHREMGERVARHADAVIVPTRAVA
ADIREHLPIDAQRLHVIGEGVAEAVLRVPPDADRRAARLGLPERGYLLTLATMEPRKGLDTLLAALRHPDAPDLPLVHVG
AAGWGDLGPAATGPGGFADLAASGRFLGLGRISDEDLAVVLSRATVLVAPSRSEGFGLPVIEAMAHGVPVVVSDAPALVE
VAGDAALVARIGDPAGFAEALARIVQNPRLHSRLSRSGRVRAAGYTWNGAARSCWELYRRISGSPAVSVADDGRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41301; Mature: 41301

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVGFLVEQILAPIPGGTGRYSAELAAALARTADPGDGVIGWCAFRRDTSAAALPGVLGP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCHHHH
LRLGLPRRALAAAWARGAGPGPPGVDVVHAPTLLVPPPVRRDRVTRAARARPRLVVTVHD
HHHCCCHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHCCCEEEEEEEC
AVPWTHPGTLTPHGVRWHREMGERVARHADAVIVPTRAVAADIREHLPIDAQRLHVIGEG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHH
VAEAVLRVPPDADRRAARLGLPERGYLLTLATMEPRKGLDTLLAALRHPDAPDLPLVHVG
HHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEC
AAGWGDLGPAATGPGGFADLAASGRFLGLGRISDEDLAVVLSRATVLVAPSRSEGFGLPV
CCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCHHHHHEECCEEEEECCCCCCCCCHH
IEAMAHGVPVVVSDAPALVEVAGDAALVARIGDPAGFAEALARIVQNPRLHSRLSRSGRV
HHHHHCCCCEEEECCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCE
RAAGYTWNGAARSCWELYRRISGSPAVSVADDGRA
EEECEECCCHHHHHHHHHHHHCCCCCEEECCCCCC
>Mature Secondary Structure
MRVGFLVEQILAPIPGGTGRYSAELAAALARTADPGDGVIGWCAFRRDTSAAALPGVLGP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCHHHH
LRLGLPRRALAAAWARGAGPGPPGVDVVHAPTLLVPPPVRRDRVTRAARARPRLVVTVHD
HHHCCCHHHHHHHHHCCCCCCCCCCCEEECCEEECCCCCCHHHHHHHHHCCCEEEEEEEC
AVPWTHPGTLTPHGVRWHREMGERVARHADAVIVPTRAVAADIREHLPIDAQRLHVIGEG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCHHHHHHHHHH
VAEAVLRVPPDADRRAARLGLPERGYLLTLATMEPRKGLDTLLAALRHPDAPDLPLVHVG
HHHHHHCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEC
AAGWGDLGPAATGPGGFADLAASGRFLGLGRISDEDLAVVLSRATVLVAPSRSEGFGLPV
CCCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCHHHHHEECCEEEEECCCCCCCCCHH
IEAMAHGVPVVVSDAPALVEVAGDAALVARIGDPAGFAEALARIVQNPRLHSRLSRSGRV
HHHHHCCCCEEEECCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHCCCE
RAAGYTWNGAARSCWELYRRISGSPAVSVADDGRA
EEECEECCCHHHHHHHHHHHHCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]