| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317560
Identifier: 158317560
GI number: 158317560
Start: 7058877
End: 7059590
Strand: Reverse
Name: 158317560
Synonym: Franean1_5816
Alternate gene names: NA
Gene position: 7059590-7058877 (Counterclockwise)
Preceding gene: 158317561
Following gene: 158317554
Centisome position: 78.6
GC content: 72.97
Gene sequence:
>714_bases ATGAGACGGGCGTGGACGTCAGCCGGGCGGCGAGCGGTGGTCGAGGAGGCCGAGGTGGCGGTGGATCGGGCGGGCACGCC ACTGGTCTGGTACGTCAGTTATGGGTCGAACCTGCGGTCGTCGCGGCTGGCCTACTACCTGGCGGGTGGGACGATGCCGG GCACGACCCACGTCTACCCGGGTTGCCGCGACCGTCGTCCGCCGCGTGCCACCGCGCCGCTCCTGCTGCCGGGATCGGTG TACTTCGCCCTGGAGTCGAAGGTCTGGGGTGGTGGGATGGCGTTCTACGACCCGGCGGTGCCCGGTCTGGCAGCGGCCCG CGCGTACCTGCTCAGCCGCCAGCAGTTCGTCGACATCGCGGCGCAGGAGATGCACCGGGAACCCGGCGGCGACCTCGATC TGACCGCCCTGCTCGGCGCCGGCCGGGCCGTTCTCGGGCCCGGCCGGTACGAGACGGTGCTGCTCGTCGGCCACTGGGGT CCGGTGCCGTTGCTGACGTTCACCGCCCCGTGGGCACTGGCTGACGTCGCTCTCACCGCTCCTTCCGGGGCCTACCTGGA CACGCTGGCGGCCGGGTTGCGCGAGGCCAACGGCTGGCCGCCGGCGCGGATCGCCGCCTACCTGGCCGGGCTGCCCGGCG CCCACGGTGTCTGGCAGCCCGACGAGATCGCCGGACGTCTCACCACCGCGGACGTGACCGAACCCGCTGGATGA
Upstream 100 bases:
>100_bases ATCGTTCAGGCGGCTGAGGGGTGGTCCGAACCCGGGAGTGCCTCTCCGCAGGGGCGGTGATCCGGGGTGAGACGGGGGTG AGAACTGTCAACGGTCCAGG
Downstream 100 bases:
>100_bases TCCTTTCTCGCCAGGGCGTGATATCTGTCAGGAAGACCGCGAGCCCGCGTGCAGCGGCCCGATGTTCTCCAGGTGGAGAC GGTCGCCGGACAACGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MRRAWTSAGRRAVVEEAEVAVDRAGTPLVWYVSYGSNLRSSRLAYYLAGGTMPGTTHVYPGCRDRRPPRATAPLLLPGSV YFALESKVWGGGMAFYDPAVPGLAAARAYLLSRQQFVDIAAQEMHREPGGDLDLTALLGAGRAVLGPGRYETVLLVGHWG PVPLLTFTAPWALADVALTAPSGAYLDTLAAGLREANGWPPARIAAYLAGLPGAHGVWQPDEIAGRLTTADVTEPAG
Sequences:
>Translated_237_residues MRRAWTSAGRRAVVEEAEVAVDRAGTPLVWYVSYGSNLRSSRLAYYLAGGTMPGTTHVYPGCRDRRPPRATAPLLLPGSV YFALESKVWGGGMAFYDPAVPGLAAARAYLLSRQQFVDIAAQEMHREPGGDLDLTALLGAGRAVLGPGRYETVLLVGHWG PVPLLTFTAPWALADVALTAPSGAYLDTLAAGLREANGWPPARIAAYLAGLPGAHGVWQPDEIAGRLTTADVTEPAG >Mature_237_residues MRRAWTSAGRRAVVEEAEVAVDRAGTPLVWYVSYGSNLRSSRLAYYLAGGTMPGTTHVYPGCRDRRPPRATAPLLLPGSV YFALESKVWGGGMAFYDPAVPGLAAARAYLLSRQQFVDIAAQEMHREPGGDLDLTALLGAGRAVLGPGRYETVLLVGHWG PVPLLTFTAPWALADVALTAPSGAYLDTLAAGLREANGWPPARIAAYLAGLPGAHGVWQPDEIAGRLTTADVTEPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25065; Mature: 25065
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAWTSAGRRAVVEEAEVAVDRAGTPLVWYVSYGSNLRSSRLAYYLAGGTMPGTTHVYP CCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEECC GCRDRRPPRATAPLLLPGSVYFALESKVWGGGMAFYDPAVPGLAAARAYLLSRQQFVDIA CCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH AQEMHREPGGDLDLTALLGAGRAVLGPGRYETVLLVGHWGPVPLLTFTAPWALADVALTA HHHHHCCCCCCEEHHHHHHCCCEEECCCCEEEEEEEECCCCCCEEEEECCHHHHEEEEEC PSGAYLDTLAAGLREANGWPPARIAAYLAGLPGAHGVWQPDEIAGRLTTADVTEPAG CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCCCC >Mature Secondary Structure MRRAWTSAGRRAVVEEAEVAVDRAGTPLVWYVSYGSNLRSSRLAYYLAGGTMPGTTHVYP CCCCHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCEECC GCRDRRPPRATAPLLLPGSVYFALESKVWGGGMAFYDPAVPGLAAARAYLLSRQQFVDIA CCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH AQEMHREPGGDLDLTALLGAGRAVLGPGRYETVLLVGHWGPVPLLTFTAPWALADVALTA HHHHHCCCCCCEEHHHHHHCCCEEECCCCEEEEEEEECCCCCCEEEEECCHHHHEEEEEC PSGAYLDTLAAGLREANGWPPARIAAYLAGLPGAHGVWQPDEIAGRLTTADVTEPAG CCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA