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The map label for this gene is yxkH [H]

Identifier: 158317541

GI number: 158317541

Start: 7039352

End: 7040221

Strand: Reverse

Name: yxkH [H]

Synonym: Franean1_5797

Alternate gene names: 158317541

Gene position: 7040221-7039352 (Counterclockwise)

Preceding gene: 158317542

Following gene: 158317540

Centisome position: 78.38

GC content: 70.57

Gene sequence:

>870_bases
ATGACCGGGATGTCGACGGCCACGGCGGCTTCGCCGGACGGAACGTGGCCCACAAGCTCTCCGGGCGACGGCTCGCCGTC
GGCGCCGTGCCGGTCCGCGCTCCCCGTGCTGATGTACCACAGCATCGGTGACTCGGTGAGCGCCGACTTCCGCAGGTGGG
AGGTGCCCGCGGGGGTCTTCGCCGAGCAGCTCGGCAGCCTTGTGGAGCACGGCTACACCGTCACCAGCCTGTCCGACGCG
CTGGCGAACCCGCGGGAGCGCCAGGTCGCGGTGACCTTCGACGACGGCTTCGAGGATTTCGTCACCAGGGCGCTGCCCGT
TCTCGCCGAGTTCGGTGCGGCGGCGACCCTGTACGTACCGACGGCCTACGTCGGTCAGCGGGCGCGCTGGCTGGAGGCGT
ACGCCGAGCGTGAGCTGGCCCTGCTCGACTGGCCCGCGCTGGCCGCGCTGGCCGACCGGGGGATCGAGATCGGCGCCCAC
GGCCACCGGCACGTGGAGCTGGACGTCGTGCCGCCCGCGATCGCGCGTTACGACGTCACGGCGAGCATGCGCACGATCGC
GGAGGAGACCGGTCACCGTCCGGACAGTTTCTGCTATCCGTTCGGTTACCATTCACCCGGTGTCCGGCAAATCGTCGAAA
GCGCCGGATTCGGTTCGGCGTGCGAGGTCGGATACAGAATCCATCGCCGGAGCCGTTCGCGTTTCCAGGTCAGCCGCCTG
ATCGTCGGCCGGTCAGTCGGCGCGGCCGACATTCTGCGGCTCGTGACGGAGGGGCATCGCGACGCGGCTCTCGCCGCGCG
GCGCAGGCTCCGGGCCGGATGGCGTGCCTACCGTTCGATCCGGTGGCGCCTGGGTGTGGAAACTGCGTGA

Upstream 100 bases:

>100_bases
CGAAGTACTGTCGTTCCACGTACTGCCGACTGAGCTTCTTCGACGATACGGCGGGTGGAATGTCCGAACTCACGGTAGTC
GCTTCGGGGCGTGACAACCG

Downstream 100 bases:

>100_bases
GCGGGCCGCCCAGAACGGCGGTCATCGTCTGCTGTCATCTTGTCGAGCGATGGGACCTGCTGACCCGGGCGCTTGATTCG
CTCGCGGCTCAGGAACACCG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTGMSTATAASPDGTWPTSSPGDGSPSAPCRSALPVLMYHSIGDSVSADFRRWEVPAGVFAEQLGSLVEHGYTVTSLSDA
LANPRERQVAVTFDDGFEDFVTRALPVLAEFGAAATLYVPTAYVGQRARWLEAYAERELALLDWPALAALADRGIEIGAH
GHRHVELDVVPPAIARYDVTASMRTIAEETGHRPDSFCYPFGYHSPGVRQIVESAGFGSACEVGYRIHRRSRSRFQVSRL
IVGRSVGAADILRLVTEGHRDAALAARRRLRAGWRAYRSIRWRLGVETA

Sequences:

>Translated_289_residues
MTGMSTATAASPDGTWPTSSPGDGSPSAPCRSALPVLMYHSIGDSVSADFRRWEVPAGVFAEQLGSLVEHGYTVTSLSDA
LANPRERQVAVTFDDGFEDFVTRALPVLAEFGAAATLYVPTAYVGQRARWLEAYAERELALLDWPALAALADRGIEIGAH
GHRHVELDVVPPAIARYDVTASMRTIAEETGHRPDSFCYPFGYHSPGVRQIVESAGFGSACEVGYRIHRRSRSRFQVSRL
IVGRSVGAADILRLVTEGHRDAALAARRRLRAGWRAYRSIRWRLGVETA
>Mature_288_residues
TGMSTATAASPDGTWPTSSPGDGSPSAPCRSALPVLMYHSIGDSVSADFRRWEVPAGVFAEQLGSLVEHGYTVTSLSDAL
ANPRERQVAVTFDDGFEDFVTRALPVLAEFGAAATLYVPTAYVGQRARWLEAYAERELALLDWPALAALADRGIEIGAHG
HRHVELDVVPPAIARYDVTASMRTIAEETGHRPDSFCYPFGYHSPGVRQIVESAGFGSACEVGYRIHRRSRSRFQVSRLI
VGRSVGAADILRLVTEGHRDAALAARRRLRAGWRAYRSIRWRLGVETA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 31497; Mature: 31366

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGMSTATAASPDGTWPTSSPGDGSPSAPCRSALPVLMYHSIGDSVSADFRRWEVPAGVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
AEQLGSLVEHGYTVTSLSDALANPRERQVAVTFDDGFEDFVTRALPVLAEFGAAATLYVP
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEC
TAYVGQRARWLEAYAERELALLDWPALAALADRGIEIGAHGHRHVELDVVPPAIARYDVT
HHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCEEECCCCCEEEEEEECCCHHHHHHHH
ASMRTIAEETGHRPDSFCYPFGYHSPGVRQIVESAGFGSACEVGYRIHRRSRSRFQVSRL
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IVGRSVGAADILRLVTEGHRDAALAARRRLRAGWRAYRSIRWRLGVETA
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TGMSTATAASPDGTWPTSSPGDGSPSAPCRSALPVLMYHSIGDSVSADFRRWEVPAGVF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHH
AEQLGSLVEHGYTVTSLSDALANPRERQVAVTFDDGFEDFVTRALPVLAEFGAAATLYVP
HHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEC
TAYVGQRARWLEAYAERELALLDWPALAALADRGIEIGAHGHRHVELDVVPPAIARYDVT
HHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCEEECCCCCEEEEEEECCCHHHHHHHH
ASMRTIAEETGHRPDSFCYPFGYHSPGVRQIVESAGFGSACEVGYRIHRRSRSRFQVSRL
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IVGRSVGAADILRLVTEGHRDAALAARRRLRAGWRAYRSIRWRLGVETA
HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]