| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is mec [H]
Identifier: 158317403
GI number: 158317403
Start: 6866526
End: 6866972
Strand: Reverse
Name: mec [H]
Synonym: Franean1_5654
Alternate gene names: 158317403
Gene position: 6866972-6866526 (Counterclockwise)
Preceding gene: 158317404
Following gene: 158317402
Centisome position: 76.45
GC content: 67.11
Gene sequence:
>447_bases ATGGACGCCCGATCCGGCCCGTTCGCGTCGTACGGTTGTCGCGTGCTGCGCATCGACCGAACCCACTACGAGGCGATCGT CGCCCATGCCCGCCGCGACCATCCCGACGAGGCGTGCGGCGTCATCGCCGGGCCCGAGGGCTCGGATCGGCCGGAGCGTC ACATCCCGATGGTCAACGCCGCACGCTCACCCACCTTCTACGAGTTCGACCCGGCCGAGCAGATCAAGGTGTGGAACGAG ATGTTCGACCGCGACGAGGATCCGGTCGTGATCTACCACTCCCACACCGCCACGGAGGCGTACCCGTCGCGCACCGACAT CTCCATCGCGGGGTACCCCGAGGCGCACTACGTCCTCGCCTCGACGCGGGATCCAGAGACGATCGAGTTCCGCTCCTTCC GGATCGCGGACGGTGAGGTCACCGAGGAACCCGTGGAAATCCTCTGA
Upstream 100 bases:
>100_bases AACCGGGCCCGGGGCGGATCGGTGCATCCGGTCCCGAAGTGGGGCGGTTCCCCGGCGCCGTAACCTGGTGCGAGCCGGTC GTGGTCAGGTCTGTGTTCAC
Downstream 100 bases:
>100_bases CGCCCATGTGACGTTCTCATAGAGCGGCGGCGACGGACGCGCGTGGTGGGATGCCTGTGAGCGAAGGGCATCCGGTCGCG CGAGCCCGTGACCTGCCGGG
Product: Mov34/MPN/PAD-1 family protein
Products: NA
Alternate protein names: Metallocarboxypeptidase Mec [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDARSGPFASYGCRVLRIDRTHYEAIVAHARRDHPDEACGVIAGPEGSDRPERHIPMVNAARSPTFYEFDPAEQIKVWNE MFDRDEDPVVIYHSHTATEAYPSRTDISIAGYPEAHYVLASTRDPETIEFRSFRIADGEVTEEPVEIL
Sequences:
>Translated_148_residues MDARSGPFASYGCRVLRIDRTHYEAIVAHARRDHPDEACGVIAGPEGSDRPERHIPMVNAARSPTFYEFDPAEQIKVWNE MFDRDEDPVVIYHSHTATEAYPSRTDISIAGYPEAHYVLASTRDPETIEFRSFRIADGEVTEEPVEIL >Mature_148_residues MDARSGPFASYGCRVLRIDRTHYEAIVAHARRDHPDEACGVIAGPEGSDRPERHIPMVNAARSPTFYEFDPAEQIKVWNE MFDRDEDPVVIYHSHTATEAYPSRTDISIAGYPEAHYVLASTRDPETIEFRSFRIADGEVTEEPVEIL
Specific function: Protease that hydrolyzes the covalent CysO-cysteine adduct synthesized by CysM to release L-cysteine and regenerate CysO [H]
COG id: COG1310
COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MPN (JAB/Mov34) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000555 [H]
Pfam domain/function: PF01398 Mov34 [H]
EC number: NA
Molecular weight: Translated: 16778; Mature: 16778
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARSGPFASYGCRVLRIDRTHYEAIVAHARRDHPDEACGVIAGPEGSDRPERHIPMVNA CCCCCCCCHHHCEEEEEECCHHHHHHHHHHHCCCCCHHCEEEECCCCCCCCCCCCCEEEC ARSPTFYEFDPAEQIKVWNEMFDRDEDPVVIYHSHTATEAYPSRTDISIAGYPEAHYVLA CCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE STRDPETIEFRSFRIADGEVTEEPVEIL ECCCCCEEEEEEEEEECCCCCCCCHHCC >Mature Secondary Structure MDARSGPFASYGCRVLRIDRTHYEAIVAHARRDHPDEACGVIAGPEGSDRPERHIPMVNA CCCCCCCCHHHCEEEEEECCHHHHHHHHHHHCCCCCHHCEEEECCCCCCCCCCCCCEEEC ARSPTFYEFDPAEQIKVWNEMFDRDEDPVVIYHSHTATEAYPSRTDISIAGYPEAHYVLA CCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE STRDPETIEFRSFRIADGEVTEEPVEIL ECCCCCEEEEEEEEEECCCCCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]