| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317404
Identifier: 158317404
GI number: 158317404
Start: 6867128
End: 6867661
Strand: Reverse
Name: 158317404
Synonym: Franean1_5655
Alternate gene names: NA
Gene position: 6867661-6867128 (Counterclockwise)
Preceding gene: 158317405
Following gene: 158317403
Centisome position: 76.46
GC content: 75.09
Gene sequence:
>534_bases GTGAACGGGTTCCGGCGCACCAGGGCCGGGATCGAGCTGCGGCTGCCCCGGCTCGAGTCGTCCCTGCTCACCGAGCTGTT GGGCCAGGTCGACGCGTTGCTGGAGGCGCCGCCGGTCGACGATCCGCTGGAGGCGCTTGTCGGGCTGCGCGACACCGCCC CGCCGCCCCCGGAGGATCCCGCGGTCGCGCGGCTGCTGCCCGACCCCTACCCGGACGACCCGCTGGCCTCCGGGGACTTC CGGCGCCGGCGCACCGACGAGGCCCTGGCCCGTAAGCGCGACGCGGCCCGGCGCGTGCTGGCGGCCGTGCCGGCGCCCGG TGCCGTCCTGGTGCTCGACGAGGACGCGGCGCAGGACTGGCTGACCGTCCTCAACGACCTGCGGCTGGTGCTCGGCACGC GGCTCGGTCTCACTGACGACGAGTCGACCGCCGAGCTGGAGAATCTCACGCCCGAGGATCCGCGCCGGCCGGTCGCCGCG GTCTACGCGTTCCTGACCGAGCTGCTCGACGAGCTCACCCGGGCGTTGCTCTAG
Upstream 100 bases:
>100_bases CGGAGCGGCTGCACACCTACGGCCTGTGGGCCACCATCGCCCAGGACTGAACGTCGCGGGCTGAACGTGATCGGGAGCGG ATGATCGGGAGCGGAGGCGT
Downstream 100 bases:
>100_bases GCCGAGCCAGGCCGGTCCGGGTCAGGGCCCGAGGCCGGTCCCGGGCCCTGACCCGAACCGGGCCCGGGGCGGATCGGTGC ATCCGGTCCCGAAGTGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNGFRRTRAGIELRLPRLESSLLTELLGQVDALLEAPPVDDPLEALVGLRDTAPPPPEDPAVARLLPDPYPDDPLASGDF RRRRTDEALARKRDAARRVLAAVPAPGAVLVLDEDAAQDWLTVLNDLRLVLGTRLGLTDDESTAELENLTPEDPRRPVAA VYAFLTELLDELTRALL
Sequences:
>Translated_177_residues MNGFRRTRAGIELRLPRLESSLLTELLGQVDALLEAPPVDDPLEALVGLRDTAPPPPEDPAVARLLPDPYPDDPLASGDF RRRRTDEALARKRDAARRVLAAVPAPGAVLVLDEDAAQDWLTVLNDLRLVLGTRLGLTDDESTAELENLTPEDPRRPVAA VYAFLTELLDELTRALL >Mature_177_residues MNGFRRTRAGIELRLPRLESSLLTELLGQVDALLEAPPVDDPLEALVGLRDTAPPPPEDPAVARLLPDPYPDDPLASGDF RRRRTDEALARKRDAARRVLAAVPAPGAVLVLDEDAAQDWLTVLNDLRLVLGTRLGLTDDESTAELENLTPEDPRRPVAA VYAFLTELLDELTRALL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19398; Mature: 19398
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGFRRTRAGIELRLPRLESSLLTELLGQVDALLEAPPVDDPLEALVGLRDTAPPPPEDP CCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC AVARLLPDPYPDDPLASGDFRRRRTDEALARKRDAARRVLAAVPAPGAVLVLDEDAAQDW HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH LTVLNDLRLVLGTRLGLTDDESTAELENLTPEDPRRPVAAVYAFLTELLDELTRALL HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNGFRRTRAGIELRLPRLESSLLTELLGQVDALLEAPPVDDPLEALVGLRDTAPPPPEDP CCCHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC AVARLLPDPYPDDPLASGDFRRRRTDEALARKRDAARRVLAAVPAPGAVLVLDEDAAQDW HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH LTVLNDLRLVLGTRLGLTDDESTAELENLTPEDPRRPVAAVYAFLTELLDELTRALL HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA