| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cysO [H]
Identifier: 158317402
GI number: 158317402
Start: 6865823
End: 6866251
Strand: Reverse
Name: cysO [H]
Synonym: Franean1_5653
Alternate gene names: 158317402
Gene position: 6866251-6865823 (Counterclockwise)
Preceding gene: 158317403
Following gene: 158317401
Centisome position: 76.44
GC content: 68.76
Gene sequence:
>429_bases ATGGCAGTCCAGGTCCGTGTGCCGACGATCCTGCGCAGCTACACGGGAGGCGCCAAGCTGGTCGAGGGCACGGGCGACAC GCTCGCGGCGCTCTTCCACGACCTCGACTCCCGGCACCCCGGGCTGCGCGGGCGGCTGATCTCCGGCGAGGGTGACGGCG AGCTCCACCGCTTCGTCAACATCTACGTCAACGACGAGGACGTCCGCTTCCTGGGCAGCCTCGACGCCAAGCTCAGCGAC GGCGACAATGTGACTATTCTCCCCGCCGTCGCCGGTGGCTCCGCCACCGTACCGGCGACTTTGGGTGAGGTGACTATTCT CCCCGCCGTCGCCGGTGGCTCCGCCACCGTTGACTTTGCTGCCGACGACCTAGCCGGCGGCTGCGCTCGGGTGCCGATCT CGTCCGGCATGGCTACCCGGCTCTTCTGA
Upstream 100 bases:
>100_bases GGCCTGCAGCACCGATGACGCAGTACCGATGCAGTACCACCGCCCACGCCGGGCGGCGCGCCGCGGCGGACCCGCCGGCG GCACCAGAGGAAGGAGCACC
Downstream 100 bases:
>100_bases TCAGGGCGGCAGGTCCCTACTCATGCGTTACGACTCCCTGGTGGACTCGGTAGGCCGAACCCCGCTGGTCGGACTGCCTC GGTTGTCTCCCTCTGCGGAG
Product: sulfur transfer protein ThiS
Products: NA
Alternate protein names: 9.5 kDa culture filtrate antigen cfp10A [H]
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MAVQVRVPTILRSYTGGAKLVEGTGDTLAALFHDLDSRHPGLRGRLISGEGDGELHRFVNIYVNDEDVRFLGSLDAKLSD GDNVTILPAVAGGSATVPATLGEVTILPAVAGGSATVDFAADDLAGGCARVPISSGMATRLF
Sequences:
>Translated_142_residues MAVQVRVPTILRSYTGGAKLVEGTGDTLAALFHDLDSRHPGLRGRLISGEGDGELHRFVNIYVNDEDVRFLGSLDAKLSD GDNVTILPAVAGGSATVPATLGEVTILPAVAGGSATVDFAADDLAGGCARVPISSGMATRLF >Mature_141_residues AVQVRVPTILRSYTGGAKLVEGTGDTLAALFHDLDSRHPGLRGRLISGEGDGELHRFVNIYVNDEDVRFLGSLDAKLSDG DNVTILPAVAGGSATVPATLGEVTILPAVAGGSATVDFAADDLAGGCARVPISSGMATRLF
Specific function: In its thiocarboxylated form (CysO-COSH), is the sulfur donor in the CysM-dependent cysteine biosynthetic pathway [H]
COG id: COG1977
COG function: function code H; Molybdopterin converting factor, small subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfur carrier protein CysO family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR016155 - InterPro: IPR003749 [H]
Pfam domain/function: PF02597 ThiS [H]
EC number: NA
Molecular weight: Translated: 14564; Mature: 14432
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQVRVPTILRSYTGGAKLVEGTGDTLAALFHDLDSRHPGLRGRLISGEGDGELHRFVN CEEEEECHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEE IYVNDEDVRFLGSLDAKLSDGDNVTILPAVAGGSATVPATLGEVTILPAVAGGSATVDFA EEECCCCEEEEECCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEC ADDLAGGCARVPISSGMATRLF CCCCCCCEEECCCCCCCEECCC >Mature Secondary Structure AVQVRVPTILRSYTGGAKLVEGTGDTLAALFHDLDSRHPGLRGRLISGEGDGELHRFVN EEEEECHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEE IYVNDEDVRFLGSLDAKLSDGDNVTILPAVAGGSATVPATLGEVTILPAVAGGSATVDFA EEECCCCEEEEECCCCEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEC ADDLAGGCARVPISSGMATRLF CCCCCCCEEECCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]