| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317359
Identifier: 158317359
GI number: 158317359
Start: 6807012
End: 6808853
Strand: Reverse
Name: 158317359
Synonym: Franean1_5610
Alternate gene names: NA
Gene position: 6808853-6807012 (Counterclockwise)
Preceding gene: 158317360
Following gene: 158317357
Centisome position: 75.81
GC content: 74.59
Gene sequence:
>1842_bases GTGCTGCTGCTGGTACCCATCCTGGTGAGCGTCGGGCTCATCCTGAACGGAATCCGCCTGCGCGGCCGGCTGCGCCGGCT GGACACCGTCGCCGCGTCGGGCCGGCCGGTCGACCCCGCCCACGTCTTCCTCGTGGCCGAGGGGGTGCGGCTCTCCGACG CGGCCCGGCGCGCTGCGAGCAACCACGCCCGCCGCGAGCGGCTGCTGGTGCTCGACCTCGTCCCCGCCGACCTCACCGTG GAACGCGCGCTCGACGTGGCCCGGATGGTCGACACCCGGACCTACCGGGCCGACCGTTCGGCGCCCGGCCGGGGCGCGTT CCAGGCCCTGCTGGTGCACGCCGACCTGCTGGAACGGGTCGGAATCACCCAACGGGAGGGGTTCAGCCCGGTCGAACTGG TCGACATCACGACCCGCCTGAAGCGGCACGCCCCGACCGCCACCGACCTGGCCGTCGTTCCCGGGTTGCAGGCCGCGCGT GACGACGCCGCGATGCGGGTGCGCGTCCAGCAGCGGGCCTACGCGTGCACCCCGGCGAGCCTGTACATGCCGTACGCGCC GCACATCGGAACCTTCATCGGCGCCCAGGTCAGCCAGCCGGTCGCGCTCGTCGCGACGGCGCTGTTCTGGTTCCAGCCGT TCTTCGTCTGCGCGGGACGGGTCCCGCTCGCCCCCCGCGACCTGATCCGCAGCCCGATCGTCCGCATCCTCGGCCTTGTG ATCTTCGTTGTGCACTCCGCGCGGGCCGGGCGCCGGGCGAAGGCCGCCGGGCTGCCCGCGGACCCAGCGAAGGCGGAGGC GCGCCGCCGCCGGCAGGAGACAGCCGCCTGGTACGCCGCCCGCGCCCGCCATGTCGCGCGGCTGCGCGAGGCCACCAGCG CCGAGTGCCCCTGGTGCGGGTCGGTCGAGCTCAGCGTCCGGGTGCGCTCGCGGGACCTGGAGATGGGCAAGCCGGGGCGC TTCCGCCTCAACGGCTGCGAGGCCTGCGGCCACGTCTTCCTCAACCCGATGATCACCCCGGACGGGCAGGACTACTACGA GCGCGACTGGCGGGACGGCTTCGCCGCCGAGACCGCGGAACACGCCCGTGCCCGCGAGGCCGCGGCCGACCAGGCCCGGG CCGAGCTGCTGCGTCCCTACACCACCCCGCGGGCCTGGCTGGACGTCGGAACCGGCTACGGCCACTTCTGCAACGTCGCC CGGGCCCACTGGCCGGCCACCGTGTTCGGCGGTCTCGACCTCTCCGACGCGGTGGACGACGCCTACCTGCGTGGCTGGGT GGACGCCGCCCACCGGGGCGAGCTGAGCCAGATCGCGGACGACCTCGCCGGCCGCTACGACGTGATCAGCATGTTCGGCT ATCTCGAGCGGACCCGCTACCCGTCGGAGGAGCTGGACGGCGCAGTCAAGGCGCTCGCCCCCGGTGGATACCTGATGATC GAGCTGCCGAACGCGGACTGCCCGGCGGCGCGGCGGCTGCGGGCGTACTGGGCCGGCTGGGACGTGCCGCGCCGGCTGCA CTTCATTCCGGCAGACAACCTGCTCGCCGCGCTGGAGGACCGCGGGCTGCGCCCCATCGCCGTCCAGTTCGGGCCGGCGC TGCGCCCCGGTGACCTCACCCGGGCGCTGGGCCTGCTCATCCAGCGGGTGGCGCCGCGGCGCCGGCCGTGGCTGGACCCG GCCCGGAGCGGGCCGGGCCCGCGGCTGCTGCGCGTGCCGTTGCTGCTGGCCTCGATCGGCCCGTTCCTGCTGACCGCCCT ACTGGACCGGGCCAGCAGGTCCTGGCAGGCCAAGGGGGAGCGTTCCAACACCTACCGCGTGCTGGCCCGCAAGGAGAGCT GA
Upstream 100 bases:
>100_bases GTAGGCCCGGCCCCGGCGGCCCGCCCGTCCGCGGGCGCGCTGACGGGGCCGGGCCTGGGGCTGGGGCTGGGGCTGTTCGA CCGGCGGGGGCGTGAGAGTC
Downstream 100 bases:
>100_bases AGCCGGCCGCGGGACTCTCCCGGCCATGGCGGTCGGGGAGGCCCGCGGCCGCCGGGTCAGGGGGTCTGCCGGTCGGCGAG CGGCAGGTAGATCCGGGCAC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Methyltransferase; Transferase; LOW QUALITY PROTEIN Methyltransferase Type
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MLLLVPILVSVGLILNGIRLRGRLRRLDTVAASGRPVDPAHVFLVAEGVRLSDAARRAASNHARRERLLVLDLVPADLTV ERALDVARMVDTRTYRADRSAPGRGAFQALLVHADLLERVGITQREGFSPVELVDITTRLKRHAPTATDLAVVPGLQAAR DDAAMRVRVQQRAYACTPASLYMPYAPHIGTFIGAQVSQPVALVATALFWFQPFFVCAGRVPLAPRDLIRSPIVRILGLV IFVVHSARAGRRAKAAGLPADPAKAEARRRRQETAAWYAARARHVARLREATSAECPWCGSVELSVRVRSRDLEMGKPGR FRLNGCEACGHVFLNPMITPDGQDYYERDWRDGFAAETAEHARAREAAADQARAELLRPYTTPRAWLDVGTGYGHFCNVA RAHWPATVFGGLDLSDAVDDAYLRGWVDAAHRGELSQIADDLAGRYDVISMFGYLERTRYPSEELDGAVKALAPGGYLMI ELPNADCPAARRLRAYWAGWDVPRRLHFIPADNLLAALEDRGLRPIAVQFGPALRPGDLTRALGLLIQRVAPRRRPWLDP ARSGPGPRLLRVPLLLASIGPFLLTALLDRASRSWQAKGERSNTYRVLARKES
Sequences:
>Translated_613_residues MLLLVPILVSVGLILNGIRLRGRLRRLDTVAASGRPVDPAHVFLVAEGVRLSDAARRAASNHARRERLLVLDLVPADLTV ERALDVARMVDTRTYRADRSAPGRGAFQALLVHADLLERVGITQREGFSPVELVDITTRLKRHAPTATDLAVVPGLQAAR DDAAMRVRVQQRAYACTPASLYMPYAPHIGTFIGAQVSQPVALVATALFWFQPFFVCAGRVPLAPRDLIRSPIVRILGLV IFVVHSARAGRRAKAAGLPADPAKAEARRRRQETAAWYAARARHVARLREATSAECPWCGSVELSVRVRSRDLEMGKPGR FRLNGCEACGHVFLNPMITPDGQDYYERDWRDGFAAETAEHARAREAAADQARAELLRPYTTPRAWLDVGTGYGHFCNVA RAHWPATVFGGLDLSDAVDDAYLRGWVDAAHRGELSQIADDLAGRYDVISMFGYLERTRYPSEELDGAVKALAPGGYLMI ELPNADCPAARRLRAYWAGWDVPRRLHFIPADNLLAALEDRGLRPIAVQFGPALRPGDLTRALGLLIQRVAPRRRPWLDP ARSGPGPRLLRVPLLLASIGPFLLTALLDRASRSWQAKGERSNTYRVLARKES >Mature_613_residues MLLLVPILVSVGLILNGIRLRGRLRRLDTVAASGRPVDPAHVFLVAEGVRLSDAARRAASNHARRERLLVLDLVPADLTV ERALDVARMVDTRTYRADRSAPGRGAFQALLVHADLLERVGITQREGFSPVELVDITTRLKRHAPTATDLAVVPGLQAAR DDAAMRVRVQQRAYACTPASLYMPYAPHIGTFIGAQVSQPVALVATALFWFQPFFVCAGRVPLAPRDLIRSPIVRILGLV IFVVHSARAGRRAKAAGLPADPAKAEARRRRQETAAWYAARARHVARLREATSAECPWCGSVELSVRVRSRDLEMGKPGR FRLNGCEACGHVFLNPMITPDGQDYYERDWRDGFAAETAEHARAREAAADQARAELLRPYTTPRAWLDVGTGYGHFCNVA RAHWPATVFGGLDLSDAVDDAYLRGWVDAAHRGELSQIADDLAGRYDVISMFGYLERTRYPSEELDGAVKALAPGGYLMI ELPNADCPAARRLRAYWAGWDVPRRLHFIPADNLLAALEDRGLRPIAVQFGPALRPGDLTRALGLLIQRVAPRRRPWLDP ARSGPGPRLLRVPLLLASIGPFLLTALLDRASRSWQAKGERSNTYRVLARKES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67631; Mature: 67631
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLVPILVSVGLILNGIRLRGRLRRLDTVAASGRPVDPAHVFLVAEGVRLSDAARRAAS CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH NHARRERLLVLDLVPADLTVERALDVARMVDTRTYRADRSAPGRGAFQALLVHADLLERV HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GITQREGFSPVELVDITTRLKRHAPTATDLAVVPGLQAARDDAAMRVRVQQRAYACTPAS CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCHH LYMPYAPHIGTFIGAQVSQPVALVATALFWFQPFFVCAGRVPLAPRDLIRSPIVRILGLV HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IFVVHSARAGRRAKAAGLPADPAKAEARRRRQETAAWYAARARHVARLREATSAECPWCG HHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SVELSVRVRSRDLEMGKPGRFRLNGCEACGHVFLNPMITPDGQDYYERDWRDGFAAETAE CEEEEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEECCCCCHHHHHHHCCCHHHHHHH HARAREAAADQARAELLRPYTTPRAWLDVGTGYGHFCNVARAHWPATVFGGLDLSDAVDD HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHHH AYLRGWVDAAHRGELSQIADDLAGRYDVISMFGYLERTRYPSEELDGAVKALAPGGYLMI HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCEEEE ELPNADCPAARRLRAYWAGWDVPRRLHFIPADNLLAALEDRGLRPIAVQFGPALRPGDLT EECCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHH RALGLLIQRVAPRRRPWLDPARSGPGPRLLRVPLLLASIGPFLLTALLDRASRSWQAKGE HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RSNTYRVLARKES CCCCEEEEEECCC >Mature Secondary Structure MLLLVPILVSVGLILNGIRLRGRLRRLDTVAASGRPVDPAHVFLVAEGVRLSDAARRAAS CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH NHARRERLLVLDLVPADLTVERALDVARMVDTRTYRADRSAPGRGAFQALLVHADLLERV HHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC GITQREGFSPVELVDITTRLKRHAPTATDLAVVPGLQAARDDAAMRVRVQQRAYACTPAS CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCHH LYMPYAPHIGTFIGAQVSQPVALVATALFWFQPFFVCAGRVPLAPRDLIRSPIVRILGLV HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IFVVHSARAGRRAKAAGLPADPAKAEARRRRQETAAWYAARARHVARLREATSAECPWCG HHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SVELSVRVRSRDLEMGKPGRFRLNGCEACGHVFLNPMITPDGQDYYERDWRDGFAAETAE CEEEEEEEECCCCCCCCCCCEEECHHHHHHHHHCCCEECCCCCHHHHHHHCCCHHHHHHH HARAREAAADQARAELLRPYTTPRAWLDVGTGYGHFCNVARAHWPATVFGGLDLSDAVDD HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCEECCCCHHHHHHH AYLRGWVDAAHRGELSQIADDLAGRYDVISMFGYLERTRYPSEELDGAVKALAPGGYLMI HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCCCEEEE ELPNADCPAARRLRAYWAGWDVPRRLHFIPADNLLAALEDRGLRPIAVQFGPALRPGDLT EECCCCCHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHH RALGLLIQRVAPRRRPWLDPARSGPGPRLLRVPLLLASIGPFLLTALLDRASRSWQAKGE HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RSNTYRVLARKES CCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA