| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317357
Identifier: 158317357
GI number: 158317357
Start: 6802712
End: 6803653
Strand: Reverse
Name: 158317357
Synonym: Franean1_5607
Alternate gene names: NA
Gene position: 6803653-6802712 (Counterclockwise)
Preceding gene: 158317359
Following gene: 158317355
Centisome position: 75.75
GC content: 74.1
Gene sequence:
>942_bases ATGGCGACACACCGTAGGTCCGGGCGGTCCGAGGGCCGCCGACTCAGGGGCGCACGCGGCGACCGCGCCACCGCGCAGAC CGTCGCGATCGGGATGGCCGCGGTCGGCGCGACACTGGTGGTCGGCGCCGCCGGAGCACTGCACGTGACCGGCTCGGTGG AGGATCCGGACATGTCGACGACGGCGCAGGCAGGCGACGGGGCCGTTCCCACCACTTCGGCGCGGCCCGACGTGGCCACG CCGCACCGCATCACCGACTCCACCGGCAACCCCGATCCCGCGGCGGCCGACGGTCGCGCGGCCGCGGCCCCGGCCCCGGG CGCGGAGCAGTCCCGCGGCGCGATCCCCGGCATCGGCGACCTCATGATGTCGCGGATCCCGTCGTCGACCCGGCAGGTCA TCGTCGTGACCGGCGCAGACCAGTCCTCAACCGTGAACCGCGTCGTGCTCTGGCAGCGCGCGGACGCCGACGCCCCCTGG ACAGCCGTCGGCGCGGAGATCCCCGGCCGCAACGGAGCCAACGGCTGGACCCACGACCACGTCGAGGGCGATCTGCGTAG CCCCGTGGGCGCGTTCAGCCTCACCGCCGCCGGGGGCCGCTACGCCGACCCGGGCACCGCGCTTCCCTACGAGTACCGCC CGTCCTTCTATCAGGCCGGCGGCTACGAGGGCGACCCGATGGGGGAGGCCTTCAACTACGTGGTCGCGATCGACTACAAC CGGTTGCCGGGGCATCCGCCGTCCGACCCGACCCGGCCGCTGGGCGCCGCGGCCGGCGGCGACATCTGGCTGCACGTGGA CCACAACACACCCACCCGCGGCTGCGTCAGCCTCCCGCAGGCCTCGATGGAGACCGTCCTGCACTGGCTGGCCCCGAGCA GCCATCCCATGATCATCATGGGTGACCGGGCAAGCCTGGAGGCGTCCGCCGGCCAGCAGTGA
Upstream 100 bases:
>100_bases TTGCCGCACAGCACTGCCCTTGCGCATGTGATGGTGGTAAGCGACGCGGGAGGCGCGGAGGTGGCTGGAGAGGCGCGGCT TCGGCCTGGAAGTCGGAGGA
Downstream 100 bases:
>100_bases CCCCGGCAGCCTGGGCCCTTGTCCTTCGAAGTGAGCCCCCGACCCCCGAAGTTCGGGGTCCCGAAGCCAAACCAGCCCCT TGCCGGGCCGGCTGGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family Protein; Basic Proline-Rich Protein
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MATHRRSGRSEGRRLRGARGDRATAQTVAIGMAAVGATLVVGAAGALHVTGSVEDPDMSTTAQAGDGAVPTTSARPDVAT PHRITDSTGNPDPAAADGRAAAAPAPGAEQSRGAIPGIGDLMMSRIPSSTRQVIVVTGADQSSTVNRVVLWQRADADAPW TAVGAEIPGRNGANGWTHDHVEGDLRSPVGAFSLTAAGGRYADPGTALPYEYRPSFYQAGGYEGDPMGEAFNYVVAIDYN RLPGHPPSDPTRPLGAAAGGDIWLHVDHNTPTRGCVSLPQASMETVLHWLAPSSHPMIIMGDRASLEASAGQQ
Sequences:
>Translated_313_residues MATHRRSGRSEGRRLRGARGDRATAQTVAIGMAAVGATLVVGAAGALHVTGSVEDPDMSTTAQAGDGAVPTTSARPDVAT PHRITDSTGNPDPAAADGRAAAAPAPGAEQSRGAIPGIGDLMMSRIPSSTRQVIVVTGADQSSTVNRVVLWQRADADAPW TAVGAEIPGRNGANGWTHDHVEGDLRSPVGAFSLTAAGGRYADPGTALPYEYRPSFYQAGGYEGDPMGEAFNYVVAIDYN RLPGHPPSDPTRPLGAAAGGDIWLHVDHNTPTRGCVSLPQASMETVLHWLAPSSHPMIIMGDRASLEASAGQQ >Mature_312_residues ATHRRSGRSEGRRLRGARGDRATAQTVAIGMAAVGATLVVGAAGALHVTGSVEDPDMSTTAQAGDGAVPTTSARPDVATP HRITDSTGNPDPAAADGRAAAAPAPGAEQSRGAIPGIGDLMMSRIPSSTRQVIVVTGADQSSTVNRVVLWQRADADAPWT AVGAEIPGRNGANGWTHDHVEGDLRSPVGAFSLTAAGGRYADPGTALPYEYRPSFYQAGGYEGDPMGEAFNYVVAIDYNR LPGHPPSDPTRPLGAAAGGDIWLHVDHNTPTRGCVSLPQASMETVLHWLAPSSHPMIIMGDRASLEASAGQQ
Specific function: Unknown
COG id: COG3786
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32265; Mature: 32134
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHRRSGRSEGRRLRGARGDRATAQTVAIGMAAVGATLVVGAAGALHVTGSVEDPDMST CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC TAQAGDGAVPTTSARPDVATPHRITDSTGNPDPAAADGRAAAAPAPGAEQSRGAIPGIGD CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH LMMSRIPSSTRQVIVVTGADQSSTVNRVVLWQRADADAPWTAVGAEIPGRNGANGWTHDH HHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC VEGDLRSPVGAFSLTAAGGRYADPGTALPYEYRPSFYQAGGYEGDPMGEAFNYVVAIDYN CCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECC RLPGHPPSDPTRPLGAAAGGDIWLHVDHNTPTRGCVSLPQASMETVLHWLAPSSHPMIIM CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHCCCCCCEEEE GDRASLEASAGQQ CCCCCCCCCCCCC >Mature Secondary Structure ATHRRSGRSEGRRLRGARGDRATAQTVAIGMAAVGATLVVGAAGALHVTGSVEDPDMST CCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC TAQAGDGAVPTTSARPDVATPHRITDSTGNPDPAAADGRAAAAPAPGAEQSRGAIPGIGD CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHH LMMSRIPSSTRQVIVVTGADQSSTVNRVVLWQRADADAPWTAVGAEIPGRNGANGWTHDH HHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCC VEGDLRSPVGAFSLTAAGGRYADPGTALPYEYRPSFYQAGGYEGDPMGEAFNYVVAIDYN CCCHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEEECC RLPGHPPSDPTRPLGAAAGGDIWLHVDHNTPTRGCVSLPQASMETVLHWLAPSSHPMIIM CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCHHHHHHHHHHHCCCCCCEEEE GDRASLEASAGQQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA