Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is yojK [H]

Identifier: 158317360

GI number: 158317360

Start: 6808950

End: 6810140

Strand: Reverse

Name: yojK [H]

Synonym: Franean1_5611

Alternate gene names: 158317360

Gene position: 6810140-6808950 (Counterclockwise)

Preceding gene: 158317361

Following gene: 158317359

Centisome position: 75.82

GC content: 73.97

Gene sequence:

>1191_bases
ATGGGCCGTGTTCTCTTCGCCGTGCCGCCGCTGACCGGGCACGTGAACCCGGCGGTGGGCATCGCCGGCGAGCTGGCGGC
CCGCGGGCAGGAGGTGGCCCTGGTCGGCCACGCGAGCGTCGTCGGGCCGCTCGTCCCGCCGTCCGTCCCGCTCATCGCGC
TGCCAGGGGAGATATCGGCCGACCAGCGGGCCGAGCTGGAGGCACGGTCCCGGCCGCTGCGCGGGCCCGCGTCACTGAAG
TTCCTGTGGGACGAGTTCCTGCTGCCGCTGGGCGCCTCGATGGCGCGGGACGTCGGTGCCGTCGTCGAACGGTGGCGCCC
GGATGTGATCGTCGCCGACCAGCAGGCGGTCGGGGTCGCCATGGTCGCCCGTCGGCGCGGCATCCGGTGGGCCACGCTCG
CCACCACGTCGGCGGAGCTCGACGACCCCTACGCCGTGCTCGCCGGGGTCGGGAACTGGGTGTCGGAGCGGCTGCGGGAC
TTCCAGGTCGCGAACGGCGTCCCGGCGGAGGAGGCGGCGCGCGGTGACCTGCGCTTCTCTGAGGACCTCACTGTGGTCTG
CTCGGTGCCCTCGTTGCTGCGTACTGCCAGTCATCCGTCCCATCACGTGTTCGTCGGCTGCGCCGCCGGACTGCGCCGGT
CGGCCCCGGAGTTCCCCTGGGAGTGGCTCGACCGGGACCGCCGCACCGTGCTCGTCTCGCTCGGCACGGTGACCCGGGAG
GCCGGCGGGCGTTTCCTGCGCGCGGCCGCGGAGGCGCTGGTGGGGATGTCCGACCGGGTGCAGGCCGTGATCGTCGCGCC
TCCCGGCCCGCTGGACGACCTCGCCGGCCAGGTTCCCGACGACCTGCTGGTCCGTCCGTTCGTGCCGCAGGTGGACCTGA
TGGCCGGACTGGACGCGATAGTGTGCCACGCGGGCAACAACACGGTGTGTGAGGCTTTGTCGCGGGGAGTGCCGCTGGTG
GTCGCGCCGGTTCGTGACGACCAGCCGATCATCGGCGAGCAGGTGGTGCGGGCCGGTGCCGGTGTGCGGGTGCGCTTCGG
GCGCTCGACCCCGGTGACGCTGGCCACCGCGATCGGCACCGTGCTCGACGAGCCGTCCCACCGGGTCGCGGCGCGGCGGC
TGCAGGGCGAGTTCAGCGCGGCGGGCGGTGTCGTGGCCGCCGCCGACCACATTGAGAAGCTGCTGCCGTAG

Upstream 100 bases:

>100_bases
CCGGTTCGCCGGCCGAGGCCTGATCGTCACCGGTGCGGCTCGCGAAGGGTGCGGCTGACTCACCGCCGGAAGGGAGACGA
ATGGAATTTCGGGGGCTTTG

Downstream 100 bases:

>100_bases
GCCCGGCCCCGGCGGCCCGCCCGTCCGCGGGCGCGCTGACGGGGCCGGGCCTGGGGCTGGGGCTGGGGCTGTTCGACCGG
CGGGGGCGTGAGAGTCGTGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLK
FLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRD
FQVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE
AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLV
VAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP

Sequences:

>Translated_396_residues
MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLK
FLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRD
FQVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE
AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLV
VAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP
>Mature_395_residues
GRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISADQRAELEARSRPLRGPASLKF
LWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVAMVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDF
QVANGVPAEEAARGDLRFSEDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTREA
GGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAIVCHAGNNTVCEALSRGVPLVV
APVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGTVLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glycosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002213
- InterPro:   IPR006326 [H]

Pfam domain/function: PF00201 UDPGT [H]

EC number: NA

Molecular weight: Translated: 41799; Mature: 41668

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISA
CCCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCC
DQRAELEARSRPLRGPASLKFLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVA
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH
MVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDFQVANGVPAEEAARGDLRFS
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEC
EDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE
CCCEEEECCHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCCEEEEEEECHHHHH
AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAI
HCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCCCCCCHHHHHCCCEE
VCHAGNNTVCEALSRGVPLVVAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGT
EEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
VLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP
HHCCCHHHHHHHHHCCCHHHCCCEEHHHHHHHHHCC
>Mature Secondary Structure 
GRVLFAVPPLTGHVNPAVGIAGELAARGQEVALVGHASVVGPLVPPSVPLIALPGEISA
CCEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCCC
DQRAELEARSRPLRGPASLKFLWDEFLLPLGASMARDVGAVVERWRPDVIVADQQAVGVA
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH
MVARRRGIRWATLATTSAELDDPYAVLAGVGNWVSERLRDFQVANGVPAEEAARGDLRFS
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEC
EDLTVVCSVPSLLRTASHPSHHVFVGCAAGLRRSAPEFPWEWLDRDRRTVLVSLGTVTRE
CCCEEEECCHHHHHHCCCCCCEEEEEEHHHHHCCCCCCCHHHHCCCCEEEEEEECHHHHH
AGGRFLRAAAEALVGMSDRVQAVIVAPPGPLDDLAGQVPDDLLVRPFVPQVDLMAGLDAI
HCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHCCCCHHHCCCCCCCCHHHHHCCCEE
VCHAGNNTVCEALSRGVPLVVAPVRDDQPIIGEQVVRAGAGVRVRFGRSTPVTLATAIGT
EEECCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
VLDEPSHRVAARRLQGEFSAAGGVVAAADHIEKLLP
HHCCCHHHHHHHHHCCCHHHCCCEEHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]