| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158317200
Identifier: 158317200
GI number: 158317200
Start: 6591672
End: 6592340
Strand: Direct
Name: 158317200
Synonym: Franean1_5447
Alternate gene names: NA
Gene position: 6591672-6592340 (Clockwise)
Preceding gene: 158317199
Following gene: 158317202
Centisome position: 73.39
GC content: 75.34
Gene sequence:
>669_bases GTGCGACGGCCGTCAGGTGTGGTGCACCGCAGGTGGACGATCGGTCTCGTGCTGGTCGTGGCCGTCCTTCCCGCGTCGTG CGGCGATTCGGCCGGCACGACGGCGGGCTCCCCCGCGATCTCACCCGGCACCAGGGTCTCGCCCGGGGCCGCGGTCTCGC CCGGCGGGTCGGTCGGATCAGGCGAATCCGGCGCGGCTGCCGGAGCCGATCCGCGGGACGGCGCGGAGCCGTCCGCCGCG GTCGCGCGATGCACGGCGGCGGGACTCGCCGCGTCGCTGGACGCGGCGCCCGCGGAGGGCACAGGCCAGCAACAGCTTCA CGTGATCTTCGCCAACCGTTCCGCGGCCGACTGTGCCCTGTACGGGCACCCCGGCGCGCAGCTGCGGTCGGCGACCGGAG ACACCTGGGACCTCGTGCGGTCCACCCTCGTCAATCCCACGCGGGTCGTCCTGGCGCCCGGCGAGCGGGCACACGCGACG CTGGCCTACCTGCCGACAGACCCCGGCGACGGCACCGGCAACCCTGTCTTCACTCCGGTCACCCTCGTCCTGACCCCGCC GGACGAGCGGGACTCGCTGTCGGTCCCGTGGACGCGCGGACCCGTCCTGCGGCAGGACGGCGCCACGCACCCCGGCACGT ACATCTCCGCGCTCGAGCCGGGCGCCTGA
Upstream 100 bases:
>100_bases GGCACGGCGCACGGTGTCGGCGTCGCGACCCTGGATCGACGCCGTCTGTCCGCGCGTGAGACGGTGCCGGCGCGGGGCCC TCGATCCTCATGGAGGACGT
Downstream 100 bases:
>100_bases AGCCTTCCCAGGTGGACGCCGCTGCCCCTCGGGCACGCGGCCCGCGTTTTTCACGTTTCAAGGCTTGATTTCAAGGCTTG GTTGTCATCTGGTGTTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MRRPSGVVHRRWTIGLVLVVAVLPASCGDSAGTTAGSPAISPGTRVSPGAAVSPGGSVGSGESGAAAGADPRDGAEPSAA VARCTAAGLAASLDAAPAEGTGQQQLHVIFANRSAADCALYGHPGAQLRSATGDTWDLVRSTLVNPTRVVLAPGERAHAT LAYLPTDPGDGTGNPVFTPVTLVLTPPDERDSLSVPWTRGPVLRQDGATHPGTYISALEPGA
Sequences:
>Translated_222_residues MRRPSGVVHRRWTIGLVLVVAVLPASCGDSAGTTAGSPAISPGTRVSPGAAVSPGGSVGSGESGAAAGADPRDGAEPSAA VARCTAAGLAASLDAAPAEGTGQQQLHVIFANRSAADCALYGHPGAQLRSATGDTWDLVRSTLVNPTRVVLAPGERAHAT LAYLPTDPGDGTGNPVFTPVTLVLTPPDERDSLSVPWTRGPVLRQDGATHPGTYISALEPGA >Mature_222_residues MRRPSGVVHRRWTIGLVLVVAVLPASCGDSAGTTAGSPAISPGTRVSPGAAVSPGGSVGSGESGAAAGADPRDGAEPSAA VARCTAAGLAASLDAAPAEGTGQQQLHVIFANRSAADCALYGHPGAQLRSATGDTWDLVRSTLVNPTRVVLAPGERAHAT LAYLPTDPGDGTGNPVFTPVTLVLTPPDERDSLSVPWTRGPVLRQDGATHPGTYISALEPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22151; Mature: 22151
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPSGVVHRRWTIGLVLVVAVLPASCGDSAGTTAGSPAISPGTRVSPGAAVSPGGSVGS CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC GESGAAAGADPRDGAEPSAAVARCTAAGLAASLDAAPAEGTGQQQLHVIFANRSAADCAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEE YGHPGAQLRSATGDTWDLVRSTLVNPTRVVLAPGERAHATLAYLPTDPGDGTGNPVFTPV ECCCCHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECEE TLVLTPPDERDSLSVPWTRGPVLRQDGATHPGTYISALEPGA EEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC >Mature Secondary Structure MRRPSGVVHRRWTIGLVLVVAVLPASCGDSAGTTAGSPAISPGTRVSPGAAVSPGGSVGS CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC GESGAAAGADPRDGAEPSAAVARCTAAGLAASLDAAPAEGTGQQQLHVIFANRSAADCAL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEE YGHPGAQLRSATGDTWDLVRSTLVNPTRVVLAPGERAHATLAYLPTDPGDGTGNPVFTPV ECCCCHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECEE TLVLTPPDERDSLSVPWTRGPVLRQDGATHPGTYISALEPGA EEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA