| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317199
Identifier: 158317199
GI number: 158317199
Start: 6590896
End: 6591543
Strand: Direct
Name: 158317199
Synonym: Franean1_5446
Alternate gene names: NA
Gene position: 6590896-6591543 (Clockwise)
Preceding gene: 158317198
Following gene: 158317200
Centisome position: 73.38
GC content: 72.07
Gene sequence:
>648_bases ATGGCTCGCGCACTGATCATGGATGACCTGGCCGGTTTCGTCATCGCGCACGCCGGGATGCGCCGGGAGTTCGGCCGGCT GGCCCGGGTCGCCCGCGCCCCGCGGGGCGCCGAGCACGCCGCGCTGATCGAGGAGCAGATCGCGCTGACCACCGACGTCC TGCACAGCCACCATGCCGGCGAGGACCGGGACCTCTGGCCGCTGCTGCGCCTGCGCGCGCCGGAGGCGGCCGGCGAGCTC GACGCTCTCGCCGCCGAGCACGAGTCGGTCGATCCGCTGCTGGCCGCGGCCGCCGAGACCGCCGTCGCGCTCACCGAGCG GGCTCAGGTTCTCGAGGCGCTGCACGACCTGATCAACGCGCACCTGGACCACGAGGACACGGTCGTCCTCCCGCTGATGC TCGACCATCTGACCCTGGCCGAGATGGAGGAGATCGGCCGGCAGGCACTCGCCGAGATCGGCCGGCGGCGCGCGCCCGCG GTCTTCGGGTGGTATTCGAGCGGCGCGCACAAGGAGCTGCGTACGGCCGCCCTCGCGACCGTTCCGCCCATCCCGCGCTT TCTGTTCAACCGCTTCTGGTGGCCGTCCTACCAGCGTCGCTTCGAGCTCCTCTACGGCGCCGACGAGCACGCTCTGTTGA GCGTCTGA
Upstream 100 bases:
>100_bases CCTACTGGGCGGCAAGAGCACACCAAGCGCTTGCCAAGTGCCCGTCAAGCGGCAACCGCCACGCTGAGTCCCATCCGAAG GAAAACGGGAGGGAACCTCG
Downstream 100 bases:
>100_bases TCCGGCCCGGCCCGGCCCGGACCGGCCGGGCACGGCGCACGGTGTCGGCGTCGCGACCCTGGATCGACGCCGTCTGTCCG CGCGTGAGACGGTGCCGGCG
Product: hemerythrin HHE cation binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MARALIMDDLAGFVIAHAGMRREFGRLARVARAPRGAEHAALIEEQIALTTDVLHSHHAGEDRDLWPLLRLRAPEAAGEL DALAAEHESVDPLLAAAAETAVALTERAQVLEALHDLINAHLDHEDTVVLPLMLDHLTLAEMEEIGRQALAEIGRRRAPA VFGWYSSGAHKELRTAALATVPPIPRFLFNRFWWPSYQRRFELLYGADEHALLSV
Sequences:
>Translated_215_residues MARALIMDDLAGFVIAHAGMRREFGRLARVARAPRGAEHAALIEEQIALTTDVLHSHHAGEDRDLWPLLRLRAPEAAGEL DALAAEHESVDPLLAAAAETAVALTERAQVLEALHDLINAHLDHEDTVVLPLMLDHLTLAEMEEIGRQALAEIGRRRAPA VFGWYSSGAHKELRTAALATVPPIPRFLFNRFWWPSYQRRFELLYGADEHALLSV >Mature_214_residues ARALIMDDLAGFVIAHAGMRREFGRLARVARAPRGAEHAALIEEQIALTTDVLHSHHAGEDRDLWPLLRLRAPEAAGELD ALAAEHESVDPLLAAAAETAVALTERAQVLEALHDLINAHLDHEDTVVLPLMLDHLTLAEMEEIGRQALAEIGRRRAPAV FGWYSSGAHKELRTAALATVPPIPRFLFNRFWWPSYQRRFELLYGADEHALLSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23860; Mature: 23728
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARALIMDDLAGFVIAHAGMRREFGRLARVARAPRGAEHAALIEEQIALTTDVLHSHHAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC EDRDLWPLLRLRAPEAAGELDALAAEHESVDPLLAAAAETAVALTERAQVLEALHDLINA CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDHEDTVVLPLMLDHLTLAEMEEIGRQALAEIGRRRAPAVFGWYSSGAHKELRTAALAT HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH VPPIPRFLFNRFWWPSYQRRFELLYGADEHALLSV CCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure ARALIMDDLAGFVIAHAGMRREFGRLARVARAPRGAEHAALIEEQIALTTDVLHSHHAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC EDRDLWPLLRLRAPEAAGELDALAAEHESVDPLLAAAAETAVALTERAQVLEALHDLINA CCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLDHEDTVVLPLMLDHLTLAEMEEIGRQALAEIGRRRAPAVFGWYSSGAHKELRTAALAT HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH VPPIPRFLFNRFWWPSYQRRFELLYGADEHALLSV CCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA