| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is ywqK [H]
Identifier: 158317188
GI number: 158317188
Start: 6573988
End: 6574338
Strand: Reverse
Name: ywqK [H]
Synonym: Franean1_5435
Alternate gene names: 158317188
Gene position: 6574338-6573988 (Counterclockwise)
Preceding gene: 158317189
Following gene: 158317187
Centisome position: 73.19
GC content: 55.84
Gene sequence:
>351_bases GTGACTGAATCCGATCCGGTTCGTTCGGTGAATATTGATGACATCGAATACACGGACGATCTTTTCGTCATCTATGAAGG TGAGCCTTTCACTGGTGAGGTGGTCGACTACTACGCAGACGGCCAGCTCCGCAAGATTGAAACCTATGGAAACGGCATCC CAAGAGGGCCGGAGCGTACGTTCTATCCTGATGGGTCGATCAAGTCTGAGTACTGGAACGTCGACGGCGGCTGGCACGGC ATCGGCCGTACCTGGTTCCCGAACGGCCAGCCGGAATCTGAGACACAGTACGATCATGCCGAAGTCCTCGAGCGGAAGCG CTGGTCTGAGGACGGAACCGAGTTGAGCTGA
Upstream 100 bases:
>100_bases TGATGGCTCCTTGTTGCCCAAACTGTACTGCTATTCTCGGAGGCGACGGTGGCGTAGAGTCCATCCCCGGAAAGCTTCCG GTCGACGAATGGAGAAGGCA
Downstream 100 bases:
>100_bases TCTACGCCCGGCTCGGTCGCGTGAGTTGGTGTTCGATAATGCAAGGGGTGCGGTGAGGCAGGCCGAGGACGCTGAGGCGT TGCAGGCTGAGCGGTGTCGG
Product: MORN repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTESDPVRSVNIDDIEYTDDLFVIYEGEPFTGEVVDYYADGQLRKIETYGNGIPRGPERTFYPDGSIKSEYWNVDGGWHG IGRTWFPNGQPESETQYDHAEVLERKRWSEDGTELS
Sequences:
>Translated_116_residues MTESDPVRSVNIDDIEYTDDLFVIYEGEPFTGEVVDYYADGQLRKIETYGNGIPRGPERTFYPDGSIKSEYWNVDGGWHG IGRTWFPNGQPESETQYDHAEVLERKRWSEDGTELS >Mature_115_residues TESDPVRSVNIDDIEYTDDLFVIYEGEPFTGEVVDYYADGQLRKIETYGNGIPRGPERTFYPDGSIKSEYWNVDGGWHGI GRTWFPNGQPESETQYDHAEVLERKRWSEDGTELS
Specific function: Unknown
COG id: COG2849
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011652 [H]
Pfam domain/function: PF07661 MORN_2 [H]
EC number: NA
Molecular weight: Translated: 13375; Mature: 13244
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESDPVRSVNIDDIEYTDDLFVIYEGEPFTGEVVDYYADGQLRKIETYGNGIPRGPERT CCCCCCCEECCCCCCEECCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCC FYPDGSIKSEYWNVDGGWHGIGRTWFPNGQPESETQYDHAEVLERKRWSEDGTELS CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TESDPVRSVNIDDIEYTDDLFVIYEGEPFTGEVVDYYADGQLRKIETYGNGIPRGPERT CCCCCCEECCCCCCEECCCEEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCC FYPDGSIKSEYWNVDGGWHGIGRTWFPNGQPESETQYDHAEVLERKRWSEDGTELS CCCCCCCCCEEEECCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]