| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317187
Identifier: 158317187
GI number: 158317187
Start: 6572396
End: 6573445
Strand: Reverse
Name: 158317187
Synonym: Franean1_5434
Alternate gene names: NA
Gene position: 6573445-6572396 (Counterclockwise)
Preceding gene: 158317188
Following gene: 158317186
Centisome position: 73.18
GC content: 67.14
Gene sequence:
>1050_bases ATGCTCGACGGCGATCCCTCTCCTCGCGAACCGCGGAACGCAGATCAGCAAGGTTCAGTGAGGAACCAGGAACCGCAGGG GCTGGAGCCGCCAGGACGCGGTCTTGAGTCGACGCCCGAGTTCCAGTCCCACCTCGATGACCGCAAGGCCGCCATGGAGG AGAGGTCCTCCGGCGGAGCCGGCCCCGGCGCCGACCCGCTGTCCCGGTCCGAGGAAGGCGTCGAGTCCGAGCCGGCAGTC CGGACGGAGCAGGGCAATGAGTTCCGGCCAGCGGTCCAGCCCGAAGCTGGGCCGGACATCCGGAACGCAACTGATGCGCC CGATGCATCCACTGCGCCCGGTATGCGAGGGACACCTGAGGCGCCTGCGCCTGCCGCCCGAGTCGAGCAGCCGGACGGGC AGGACCCAGTAGACGTCCAGAACGACTCGGAGTCCCTGACCGCGCCCGATTCCAGCAGCGTGCGCGACCGTCCGCAACCG TCCCGCCAGGAGTCCGTTGACGAGGCGCCTTCGCCCACCATCGTCAACGACGGCACGGTCCACGAGAACGACCCCTCCGG CAGCCCGTTGTCTGTCGAAGCAGACCCCGACCCGACGACCAGCACCGATGGCGAGACTGCCGAGGATCTGCTGCCGGATC CCGGCACCGACGGCACCGACGGCACCGACGGCACCGACGGCCCGGAAAGCTCGGACGGCCGTGACGGCGACGCCGATCAT GAAAGCGATGATCGTGACATCCCCTGGGGAGGCGAGCCTGAGGTCACCGGCCCGGCAGACGGCGTTGATGGTGTGAAGGC AGATGCGGTTCCCCGTAAGCCATACAACGGCCTGACGGCCGGCGAATACTCCGGTGGCACCGCCTACAAGAACAGATCGG ATCCGAAGCTACCCGAGACCACTGAGGATGGCACGCCCATCAGGTACAAGGAGTACGACCGCGACCCGTACGACGGCGTA CAGAGAAATGATCGGCGATTCGTCGTCGGCGACGACGACGCGCATTACTACACCGACGACCACTACCAGAGCTGGGTGAG GTTCCGTTGA
Upstream 100 bases:
>100_bases CGAGGGCCCGAGCAGTGCGCCGGAGCAGCGCCAGCCCGCAGAACTGTCAGACCGGAGCCCGTCGCCGGCAGTCGAGCCCA GTTCCCAGGACAAGGCGGGC
Downstream 100 bases:
>100_bases GACAAGATCCACTGGAAGCGATCGGAAGCGGTCTGTTCGGTGGTGTTCACGCAGTGCCGGTCGACGGACTCGCGGCGACC GGTCGACTGGTTGCCGAGCT
Product: guanine-specific ribonuclease N1 and T1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MLDGDPSPREPRNADQQGSVRNQEPQGLEPPGRGLESTPEFQSHLDDRKAAMEERSSGGAGPGADPLSRSEEGVESEPAV RTEQGNEFRPAVQPEAGPDIRNATDAPDASTAPGMRGTPEAPAPAARVEQPDGQDPVDVQNDSESLTAPDSSSVRDRPQP SRQESVDEAPSPTIVNDGTVHENDPSGSPLSVEADPDPTTSTDGETAEDLLPDPGTDGTDGTDGTDGPESSDGRDGDADH ESDDRDIPWGGEPEVTGPADGVDGVKADAVPRKPYNGLTAGEYSGGTAYKNRSDPKLPETTEDGTPIRYKEYDRDPYDGV QRNDRRFVVGDDDAHYYTDDHYQSWVRFR
Sequences:
>Translated_349_residues MLDGDPSPREPRNADQQGSVRNQEPQGLEPPGRGLESTPEFQSHLDDRKAAMEERSSGGAGPGADPLSRSEEGVESEPAV RTEQGNEFRPAVQPEAGPDIRNATDAPDASTAPGMRGTPEAPAPAARVEQPDGQDPVDVQNDSESLTAPDSSSVRDRPQP SRQESVDEAPSPTIVNDGTVHENDPSGSPLSVEADPDPTTSTDGETAEDLLPDPGTDGTDGTDGTDGPESSDGRDGDADH ESDDRDIPWGGEPEVTGPADGVDGVKADAVPRKPYNGLTAGEYSGGTAYKNRSDPKLPETTEDGTPIRYKEYDRDPYDGV QRNDRRFVVGDDDAHYYTDDHYQSWVRFR >Mature_349_residues MLDGDPSPREPRNADQQGSVRNQEPQGLEPPGRGLESTPEFQSHLDDRKAAMEERSSGGAGPGADPLSRSEEGVESEPAV RTEQGNEFRPAVQPEAGPDIRNATDAPDASTAPGMRGTPEAPAPAARVEQPDGQDPVDVQNDSESLTAPDSSSVRDRPQP SRQESVDEAPSPTIVNDGTVHENDPSGSPLSVEADPDPTTSTDGETAEDLLPDPGTDGTDGTDGTDGPESSDGRDGDADH ESDDRDIPWGGEPEVTGPADGVDGVKADAVPRKPYNGLTAGEYSGGTAYKNRSDPKLPETTEDGTPIRYKEYDRDPYDGV QRNDRRFVVGDDDAHYYTDDHYQSWVRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37274; Mature: 37274
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDGDPSPREPRNADQQGSVRNQEPQGLEPPGRGLESTPEFQSHLDDRKAAMEERSSGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GPGADPLSRSEEGVESEPAVRTEQGNEFRPAVQPEAGPDIRNATDAPDASTAPGMRGTPE CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPAARVEQPDGQDPVDVQNDSESLTAPDSSSVRDRPQPSRQESVDEAPSPTIVNDGTV CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCC HENDPSGSPLSVEADPDPTTSTDGETAEDLLPDPGTDGTDGTDGTDGPESSDGRDGDADH CCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESDDRDIPWGGEPEVTGPADGVDGVKADAVPRKPYNGLTAGEYSGGTAYKNRSDPKLPET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEDGTPIRYKEYDRDPYDGVQRNDRRFVVGDDDAHYYTDDHYQSWVRFR CCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCC >Mature Secondary Structure MLDGDPSPREPRNADQQGSVRNQEPQGLEPPGRGLESTPEFQSHLDDRKAAMEERSSGGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GPGADPLSRSEEGVESEPAVRTEQGNEFRPAVQPEAGPDIRNATDAPDASTAPGMRGTPE CCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APAPAARVEQPDGQDPVDVQNDSESLTAPDSSSVRDRPQPSRQESVDEAPSPTIVNDGTV CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCC HENDPSGSPLSVEADPDPTTSTDGETAEDLLPDPGTDGTDGTDGTDGPESSDGRDGDADH CCCCCCCCCEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESDDRDIPWGGEPEVTGPADGVDGVKADAVPRKPYNGLTAGEYSGGTAYKNRSDPKLPET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TEDGTPIRYKEYDRDPYDGVQRNDRRFVVGDDDAHYYTDDHYQSWVRFR CCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCCCCEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA