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The map label for this gene is intQ [C]

Identifier: 158317149

GI number: 158317149

Start: 6508769

End: 6509977

Strand: Reverse

Name: intQ [C]

Synonym: Franean1_5395

Alternate gene names: 158317149

Gene position: 6509977-6508769 (Counterclockwise)

Preceding gene: 158317152

Following gene: 158317148

Centisome position: 72.48

GC content: 68.98

Gene sequence:

>1209_bases
GTGCGGTCCGCACCGCTGCTTGATCCTAAAACGAGTATTTCGGCAGTCTCGGGCTCTGCTGACGGCGCGGCCTACGTGCT
GATGCCGGACGGTACGACGAAGCGGCGGCCGGTCTACGGCAAGTCGGAGGAGATCGTCCGCGGCAAGCTCACCGAACTTC
AGGCCAACTCCGACCAGGGAATCCCGGCGGACGCCACTGGGTGGACGGTCGAGCGGTACCTGACGGCCTGGCTTGCTCAG
ACCGTGAAGCCGAACCGCCAGCCGAACACGTACGTGACCTATGAGAAGGCGGTCCGGATCTACCTCGTGCCGGGTCTCGG
GAAGAAGCGGCTGAACAGGCTGACGGGCGCGGACGTCCGGCAGTTCATCCGGCGGACGGAGAGTACCTGCCGGTGCTGCG
CGCGGGGTGTGGACAAGGCCCGGCCGGAGGGGGAGCGGCGTTGCTGCGATCGGCTGCCGTCGAAGCGTCAGGTTCAGGTC
GTGCATGCCGTGCTGCGTAACGCGCTTCAGGCGGCCGTCCGGGAGGAGTTGATCCGGCGGAACGTCGCGAAGCTGGTGCA
GGTCTCGACTCCGCGCTACGGCGTCGACCGCGGCCTGACGGTCGAGCAGGCGCATCAGCTCCTCGACGCGGCGGCCGGCG
GCCGGTTGTACGCGCTGCTGGTCCTGGCGCTGTTCCTCGGGATGCGGCGCGGGGAGCTGCTCGGTCTGCAGTGGTCGGAC
ATCGACTCTGAGCGGGAGACGCTGACGGTGCGTCACACGCTGCTGCGGGTCGGCGGGGAGCTGAGGCTGTGCCCGCCGAA
GACGGAGGACTCCGAACGCACGCTGCCGCTCCTCGGTCTGGTCGCGGATGCGCTCGCCGAGCATCGCAAGCTCCAGGACG
CGGAACGCGACGCGGCCGGCGACGCCTGGGTGCAGACCGGTCACGTGTTCACGACGAAGATCGGGACTCCGATCGAGCCG
GACAACCTGCGCCGGTTCTGGATGCCGCTGCGCCGTGCGGTCGGTCTCGACGGGGTGGTGTTCCACGGGTTGCGGCACAC
CTGCGTGACGTTGCTCCTGGACCTTGGTGTGCCGCCGCACATCGTCCGCGACATCGCGGGCCACTCGGCGATCGAGGTCA
CGATGACGATCTACGCGCACGCCTCGATGGGGGAGAAGCGCCGCGCGCTGGGCAAGCTCGACGGCCACCTGACCGAACCC
CGACCCTGA

Upstream 100 bases:

>100_bases
CCGGCGTGTACCGCGCGCCGCTCGACTTCTGCCGTAGCGTGCTCCAGCTGGTTCCCCCGACCGTACTGCCGGCGAGGCTT
CCGAGATCTCGGACCTCGCG

Downstream 100 bases:

>100_bases
CGGTCGTTGCTGCACCCGTTGCTACACGTGGGGGGTCTCGGGGTCTCGGCCCCCCGGCGGACATGACGAGGGGATCGCAA
AGGCGCAGCATGTGAGCCTG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRSAPLLDPKTSISAVSGSADGAAYVLMPDGTTKRRPVYGKSEEIVRGKLTELQANSDQGIPADATGWTVERYLTAWLAQ
TVKPNRQPNTYVTYEKAVRIYLVPGLGKKRLNRLTGADVRQFIRRTESTCRCCARGVDKARPEGERRCCDRLPSKRQVQV
VHAVLRNALQAAVREELIRRNVAKLVQVSTPRYGVDRGLTVEQAHQLLDAAAGGRLYALLVLALFLGMRRGELLGLQWSD
IDSERETLTVRHTLLRVGGELRLCPPKTEDSERTLPLLGLVADALAEHRKLQDAERDAAGDAWVQTGHVFTTKIGTPIEP
DNLRRFWMPLRRAVGLDGVVFHGLRHTCVTLLLDLGVPPHIVRDIAGHSAIEVTMTIYAHASMGEKRRALGKLDGHLTEP
RP

Sequences:

>Translated_402_residues
MRSAPLLDPKTSISAVSGSADGAAYVLMPDGTTKRRPVYGKSEEIVRGKLTELQANSDQGIPADATGWTVERYLTAWLAQ
TVKPNRQPNTYVTYEKAVRIYLVPGLGKKRLNRLTGADVRQFIRRTESTCRCCARGVDKARPEGERRCCDRLPSKRQVQV
VHAVLRNALQAAVREELIRRNVAKLVQVSTPRYGVDRGLTVEQAHQLLDAAAGGRLYALLVLALFLGMRRGELLGLQWSD
IDSERETLTVRHTLLRVGGELRLCPPKTEDSERTLPLLGLVADALAEHRKLQDAERDAAGDAWVQTGHVFTTKIGTPIEP
DNLRRFWMPLRRAVGLDGVVFHGLRHTCVTLLLDLGVPPHIVRDIAGHSAIEVTMTIYAHASMGEKRRALGKLDGHLTEP
RP
>Mature_402_residues
MRSAPLLDPKTSISAVSGSADGAAYVLMPDGTTKRRPVYGKSEEIVRGKLTELQANSDQGIPADATGWTVERYLTAWLAQ
TVKPNRQPNTYVTYEKAVRIYLVPGLGKKRLNRLTGADVRQFIRRTESTCRCCARGVDKARPEGERRCCDRLPSKRQVQV
VHAVLRNALQAAVREELIRRNVAKLVQVSTPRYGVDRGLTVEQAHQLLDAAAGGRLYALLVLALFLGMRRGELLGLQWSD
IDSERETLTVRHTLLRVGGELRLCPPKTEDSERTLPLLGLVADALAEHRKLQDAERDAAGDAWVQTGHVFTTKIGTPIEP
DNLRRFWMPLRRAVGLDGVVFHGLRHTCVTLLLDLGVPPHIVRDIAGHSAIEVTMTIYAHASMGEKRRALGKLDGHLTEP
RP

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44550; Mature: 44550

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAPLLDPKTSISAVSGSADGAAYVLMPDGTTKRRPVYGKSEEIVRGKLTELQANSDQG
CCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
IPADATGWTVERYLTAWLAQTVKPNRQPNTYVTYEKAVRIYLVPGLGKKRLNRLTGADVR
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCEEEEEECCCCHHHHHHHCCHHHH
QFIRRTESTCRCCARGVDKARPEGERRCCDRLPSKRQVQVVHAVLRNALQAAVREELIRR
HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NVAKLVQVSTPRYGVDRGLTVEQAHQLLDAAAGGRLYALLVLALFLGMRRGELLGLQWSD
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCC
IDSERETLTVRHTLLRVGGELRLCPPKTEDSERTLPLLGLVADALAEHRKLQDAERDAAG
CCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DAWVQTGHVFTTKIGTPIEPDNLRRFWMPLRRAVGLDGVVFHGLRHTCVTLLLDLGVPPH
CHHEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
IVRDIAGHSAIEVTMTIYAHASMGEKRRALGKLDGHLTEPRP
HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRSAPLLDPKTSISAVSGSADGAAYVLMPDGTTKRRPVYGKSEEIVRGKLTELQANSDQG
CCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
IPADATGWTVERYLTAWLAQTVKPNRQPNTYVTYEKAVRIYLVPGLGKKRLNRLTGADVR
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHCEEEEEECCCCHHHHHHHCCHHHH
QFIRRTESTCRCCARGVDKARPEGERRCCDRLPSKRQVQVVHAVLRNALQAAVREELIRR
HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NVAKLVQVSTPRYGVDRGLTVEQAHQLLDAAAGGRLYALLVLALFLGMRRGELLGLQWSD
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCC
IDSERETLTVRHTLLRVGGELRLCPPKTEDSERTLPLLGLVADALAEHRKLQDAERDAAG
CCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
DAWVQTGHVFTTKIGTPIEPDNLRRFWMPLRRAVGLDGVVFHGLRHTCVTLLLDLGVPPH
CHHEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHH
IVRDIAGHSAIEVTMTIYAHASMGEKRRALGKLDGHLTEPRP
HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]