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The map label for this gene is 158317093

Identifier: 158317093

GI number: 158317093

Start: 6433394

End: 6434551

Strand: Direct

Name: 158317093

Synonym: Franean1_5337

Alternate gene names: NA

Gene position: 6433394-6434551 (Clockwise)

Preceding gene: 158317089

Following gene: 158317101

Centisome position: 71.63

GC content: 69.26

Gene sequence:

>1158_bases
GTGAACAACGGGGGCAACACGGACAGCAGCACCACCAGCGGCGACGGCGACGGCTGGGACTTCTTCGTCTCCTACACTCA
GCCCGACCGGGCATGGGCGGAGTGGATTGCCTGGACCCTGGAGGAAGCCGGCTGGCGGGTGCTGATCCAGGCGTGGGACT
TCACCCCAGGGTCGAACTGGGTCACCGGCATGGACGAAGGCGTCGCCGCCGCGGCGCGGACGATCGCCGTGCTCTCCCAC
GCCTACACCCACTCGGTCTACGGCGCCGCCGAATGGCGCGCCGCCTGGGCGGCCGATCCGACCGGGGGACAACGCAAGCT
CCTGCCCGTACGGATCGGTGACTGCCCCCGACCGGGCCTGCTCGGCCAGATCGGCTCCGTAGACCTCTTCGGCCTGCCGC
AGGACCGGGCACGCACAACGCTGCTGGACGCGGCACAGCGTGTGGTCTCCGGCGGACGAGCAAAACCAGACACGGCTCCG
CTGTTCCCCCCGGCCGGACGGGCAGTGCCCACGCGGCCGTCGTTCCCCGGTAGCCGGCCAGATGTCTGGAATCTCCCGCC
GCGGCTGGCCCACTTCGTCGGGCGCACCACCCTCATCGACCAGATCGAACACGAGCTAGCCCGCGCGGGATCGGTCGCGG
TCTGTGCCCTGCACGGCCTCGGCGGGATCGGAAAGACCGCCCTCGCCCTCGAATACGCCCACCGGCATACGACCGGCTTC
AACCTGGCCTGGTGGATACCCGCCGAAGATCCACGGCTCATCCCCGGACACGTCTCCGCCCTCGGCGTCGAACTCGGCCT
ACCCGACGGCGCGGACTGGCATGACGTACTTGGTGTGCTGCGGCGCAAGCAACTGCGCTGGCTCCTCATCCTCGACAACA
TCGAAGACCGGACTGTGATCGGCCCGTTCCGGCCAACAGATCACCTCGGCCGGCTGCTCGTCACCACACAGCGCGCCGGA
CTCGACGGCTACGGCACTCAAATCGCCGTACCCGAACTCCCCCGGCATGACGCGGTGGACCTGCTCACCCGTCGGATACC
GAGCATCGAAGTGGGGACGGCCGGACAGATCACCGATCTCCTCGGGAACCTGCCCCTCGCGGTGGAACAAGCCGCCAGCG
CCCCGTTACATCCGCGCTGGCACCGTCCAGCCCGCTGA

Upstream 100 bases:

>100_bases
CGCGCCTCGGCCACAGTCCCGACGCAGGCCAGACCCTGACCCTGGGCACCGCCGTACCAGCACGGTCTGACACGGCCTGT
CCCGGTGGCACACTGTCCGG

Downstream 100 bases:

>100_bases
CCTGGATGTTCAGGTTCGATCCCTGTTGGGACCGACACGCAGATACGGACCCTGGCAGGACATCTGTTCCGCATTCAAGG
AATCTGTGGCCGCGGTCAGT

Product: TIR protein

Products: NA

Alternate protein names: NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; TPR Repeat-Containing Protein; WD40 Repeat Subgroup; WD-40 Repeat-Containing Protein; Tetratricopeptide Repeat Family; XRE Family Transcriptional Regulator; NTPase-Like Protein; Peptidase; Ll-Interleukin Receptor; Chaperone Protein DNAK; SARP Family Transcriptional Regulator; Transmembrane Receptor Activity; Tetratricopeptide TPR4 Domain-Containing Protein; Pentapeptide Repeat Protein

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNNGGNTDSSTTSGDGDGWDFFVSYTQPDRAWAEWIAWTLEEAGWRVLIQAWDFTPGSNWVTGMDEGVAAAARTIAVLSH
AYTHSVYGAAEWRAAWAADPTGGQRKLLPVRIGDCPRPGLLGQIGSVDLFGLPQDRARTTLLDAAQRVVSGGRAKPDTAP
LFPPAGRAVPTRPSFPGSRPDVWNLPPRLAHFVGRTTLIDQIEHELARAGSVAVCALHGLGGIGKTALALEYAHRHTTGF
NLAWWIPAEDPRLIPGHVSALGVELGLPDGADWHDVLGVLRRKQLRWLLILDNIEDRTVIGPFRPTDHLGRLLVTTQRAG
LDGYGTQIAVPELPRHDAVDLLTRRIPSIEVGTAGQITDLLGNLPLAVEQAASAPLHPRWHRPAR

Sequences:

>Translated_385_residues
MNNGGNTDSSTTSGDGDGWDFFVSYTQPDRAWAEWIAWTLEEAGWRVLIQAWDFTPGSNWVTGMDEGVAAAARTIAVLSH
AYTHSVYGAAEWRAAWAADPTGGQRKLLPVRIGDCPRPGLLGQIGSVDLFGLPQDRARTTLLDAAQRVVSGGRAKPDTAP
LFPPAGRAVPTRPSFPGSRPDVWNLPPRLAHFVGRTTLIDQIEHELARAGSVAVCALHGLGGIGKTALALEYAHRHTTGF
NLAWWIPAEDPRLIPGHVSALGVELGLPDGADWHDVLGVLRRKQLRWLLILDNIEDRTVIGPFRPTDHLGRLLVTTQRAG
LDGYGTQIAVPELPRHDAVDLLTRRIPSIEVGTAGQITDLLGNLPLAVEQAASAPLHPRWHRPAR
>Mature_385_residues
MNNGGNTDSSTTSGDGDGWDFFVSYTQPDRAWAEWIAWTLEEAGWRVLIQAWDFTPGSNWVTGMDEGVAAAARTIAVLSH
AYTHSVYGAAEWRAAWAADPTGGQRKLLPVRIGDCPRPGLLGQIGSVDLFGLPQDRARTTLLDAAQRVVSGGRAKPDTAP
LFPPAGRAVPTRPSFPGSRPDVWNLPPRLAHFVGRTTLIDQIEHELARAGSVAVCALHGLGGIGKTALALEYAHRHTTGF
NLAWWIPAEDPRLIPGHVSALGVELGLPDGADWHDVLGVLRRKQLRWLLILDNIEDRTVIGPFRPTDHLGRLLVTTQRAG
LDGYGTQIAVPELPRHDAVDLLTRRIPSIEVGTAGQITDLLGNLPLAVEQAASAPLHPRWHRPAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41720; Mature: 41720

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNGGNTDSSTTSGDGDGWDFFVSYTQPDRAWAEWIAWTLEEAGWRVLIQAWDFTPGSNW
CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC
VTGMDEGVAAAARTIAVLSHAYTHSVYGAAEWRAAWAADPTGGQRKLLPVRIGDCPRPGL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCCEEEEEEEECCCCCCCC
LGQIGSVDLFGLPQDRARTTLLDAAQRVVSGGRAKPDTAPLFPPAGRAVPTRPSFPGSRP
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVWNLPPRLAHFVGRTTLIDQIEHELARAGSVAVCALHGLGGIGKTALALEYAHRHTTGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
NLAWWIPAEDPRLIPGHVSALGVELGLPDGADWHDVLGVLRRKQLRWLLILDNIEDRTVI
EEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEE
GPFRPTDHLGRLLVTTQRAGLDGYGTQIAVPELPRHDAVDLLTRRIPSIEVGTAGQITDL
CCCCCHHHHCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCHHHHH
LGNLPLAVEQAASAPLHPRWHRPAR
HCCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNNGGNTDSSTTSGDGDGWDFFVSYTQPDRAWAEWIAWTLEEAGWRVLIQAWDFTPGSNW
CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC
VTGMDEGVAAAARTIAVLSHAYTHSVYGAAEWRAAWAADPTGGQRKLLPVRIGDCPRPGL
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEECCCCCCCCEEEEEEEECCCCCCCC
LGQIGSVDLFGLPQDRARTTLLDAAQRVVSGGRAKPDTAPLFPPAGRAVPTRPSFPGSRP
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVWNLPPRLAHFVGRTTLIDQIEHELARAGSVAVCALHGLGGIGKTALALEYAHRHTTGF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
NLAWWIPAEDPRLIPGHVSALGVELGLPDGADWHDVLGVLRRKQLRWLLILDNIEDRTVI
EEEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCEEE
GPFRPTDHLGRLLVTTQRAGLDGYGTQIAVPELPRHDAVDLLTRRIPSIEVGTAGQITDL
CCCCCHHHHCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEECCCCCHHHHH
LGNLPLAVEQAASAPLHPRWHRPAR
HCCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA