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The map label for this gene is glxA [H]

Identifier: 158317101

GI number: 158317101

Start: 6444684

End: 6445640

Strand: Direct

Name: glxA [H]

Synonym: Franean1_5345

Alternate gene names: 158317101

Gene position: 6444684-6445640 (Clockwise)

Preceding gene: 158317093

Following gene: 158317106

Centisome position: 71.75

GC content: 72.2

Gene sequence:

>957_bases
ATGCATCGGATCGTCGTCGTCGCCGTCCCGCCGGTCACCACCCTTGATCTGTCCATCCCGGCGGCAGTGTTCCCGGCCGC
GGTGGTCCACAGCCAGCCGGCCTACGAGGTCGTGATCTGCACGGCCGAGCCCGGGATCGTACCTGGGTACACCGGGCCCA
GCGTTGTGGTGGACCGGGGCCTCGACGTGATCGACAGCGCCGACACCGTGATCGTCACGGGAACCGGAGCTCGCGCCCAC
GCCGACCAACGGGTCCTGGACGCGCTACAGCGGGCCGCTGACGACGGCCGGCGCATCGCCTCGATCTGCACGGGCGCCTT
CGTGCTGGCCCAGGCCGGGCTGCTCAACGGTCGCCCGGCCACCACGTACTGGCAGTACTCCCAGGAGATGCGCCGCCGCT
TCCCGGCCGTCGACCTGCGGCCCGACGTCCTGTACGTCGACGACGGGACCGTGCTGACCTCCGCCGGCCTGGCCGCCGGT
CTCGACCTGTGCATCCACATGATCCGGCGCGACCACGGGGCGGTGGTCGCCAACGCCGTCGCCCGAGCCGCGGTCATCGC
GCCGATCCGTCCCGGCGGCCAGGCCCAGTTCATCGAGACACCGCTGCCACCGGAGAACGGGACCTCGCTGGCCCAGACCC
GCGCCTGGGCGGCGGAGCACCTCGCCGAGCCGCTGACACTTGGCCGCCTCGCCGCCCACGCCCACACCAGTACCCGCACG
CTCACCCGCCGCTTCCGGGAGGAGACCGGTCTGAGCCCACTGCAATGGTTGCTGCACCAGCGAATCGACCGGGCTCGGGA
ACTCCTCGAGGCGACGGATCTGCCGATCACCGCCGTCGCCCGGCAAAGCGGCCTGGGAACCCCCGAGTCGCTGCGCCTCC
ACCTCCTGCGCCGCAACGGGCTCACCCCCCGCGCCTACCGCGACACGTTCACCCGCGTCGGACCAACCCCGACCTGA

Upstream 100 bases:

>100_bases
CTCGGCGGGCCCGCGCGGTTCGCGGGTACCTGTCTCACCCTGCCGCCCGCCGGAAACATACGGTAGTGGCCTGAATGCCA
CATATCCCAAGGATCAGGCC

Downstream 100 bases:

>100_bases
CCCGCCGCGTAACGGCCAGTCACAACAACGGCTCGGTAACCGACAGTCGGACACTCCCTCGTGTTCATTCCCGCCGTGCG
GCTGCTCGCCACCGGGAGCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MHRIVVVAVPPVTTLDLSIPAAVFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRGLDVIDSADTVIVTGTGARAH
ADQRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPATTYWQYSQEMRRRFPAVDLRPDVLYVDDGTVLTSAGLAAG
LDLCIHMIRRDHGAVVANAVARAAVIAPIRPGGQAQFIETPLPPENGTSLAQTRAWAAEHLAEPLTLGRLAAHAHTSTRT
LTRRFREETGLSPLQWLLHQRIDRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNGLTPRAYRDTFTRVGPTPT

Sequences:

>Translated_318_residues
MHRIVVVAVPPVTTLDLSIPAAVFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRGLDVIDSADTVIVTGTGARAH
ADQRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPATTYWQYSQEMRRRFPAVDLRPDVLYVDDGTVLTSAGLAAG
LDLCIHMIRRDHGAVVANAVARAAVIAPIRPGGQAQFIETPLPPENGTSLAQTRAWAAEHLAEPLTLGRLAAHAHTSTRT
LTRRFREETGLSPLQWLLHQRIDRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNGLTPRAYRDTFTRVGPTPT
>Mature_318_residues
MHRIVVVAVPPVTTLDLSIPAAVFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRGLDVIDSADTVIVTGTGARAH
ADQRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPATTYWQYSQEMRRRFPAVDLRPDVLYVDDGTVLTSAGLAAG
LDLCIHMIRRDHGAVVANAVARAAVIAPIRPGGQAQFIETPLPPENGTSLAQTRAWAAEHLAEPLTLGRLAAHAHTSTRT
LTRRFREETGLSPLQWLLHQRIDRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNGLTPRAYRDTFTRVGPTPT

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 34197; Mature: 34197

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRIVVVAVPPVTTLDLSIPAAVFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRG
CCEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEECCC
LDVIDSADTVIVTGTGARAHADQRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
TTYWQYSQEMRRRFPAVDLRPDVLYVDDGTVLTSAGLAAGLDLCIHMIRRDHGAVVANAV
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARAAVIAPIRPGGQAQFIETPLPPENGTSLAQTRAWAAEHLAEPLTLGRLAAHAHTSTRT
HHHHEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LTRRFREETGLSPLQWLLHQRIDRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHCC
LTPRAYRDTFTRVGPTPT
CCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHRIVVVAVPPVTTLDLSIPAAVFPAAVVHSQPAYEVVICTAEPGIVPGYTGPSVVVDRG
CCEEEEEEECCCEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEECCC
LDVIDSADTVIVTGTGARAHADQRVLDALQRAADDGRRIASICTGAFVLAQAGLLNGRPA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCC
TTYWQYSQEMRRRFPAVDLRPDVLYVDDGTVLTSAGLAAGLDLCIHMIRRDHGAVVANAV
CHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARAAVIAPIRPGGQAQFIETPLPPENGTSLAQTRAWAAEHLAEPLTLGRLAAHAHTSTRT
HHHHEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LTRRFREETGLSPLQWLLHQRIDRARELLEATDLPITAVARQSGLGTPESLRLHLLRRNG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHCC
LTPRAYRDTFTRVGPTPT
CCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]