Click here to switch to the map view.

The map label for this gene is yfaO [C]

Identifier: 158317089

GI number: 158317089

Start: 6423208

End: 6423678

Strand: Direct

Name: yfaO [C]

Synonym: Franean1_5333

Alternate gene names: 158317089

Gene position: 6423208-6423678 (Clockwise)

Preceding gene: 158317088

Following gene: 158317093

Centisome position: 71.51

GC content: 64.97

Gene sequence:

>471_bases
TTGGCGCGAATCGACTACTTCAACGACCCGAACGCCCCCAAGGCGAACAGCGTCGTCCCCTCCGTGACCGCCGTCGTCAC
CGACGAGGCCGGACGCATCCTCATGGTTCACAAGACCGACAACGACCTGTGGGCCCTGCCCGGCGGCGGCATGGACCTCG
GCGAATCCATCACCGACGCCGCCGTCCGCGAGACCAAGGAAGAGACCGGCATCGATATCGAGGTCACCGGGTTGATCGGG
GTCTACACCAACCCCCGGCACGTCCTGGCCTACGACGACGGCGAGGTCCGCCAGCAGTTCTCGCTCTGCTTCACCACCCG
CAATCTCGGCGGAGAGCTACGCACCTCCAGCGAGACGAAGGAGGTCCAGTTCGTCGCACCCGAGGACCTGGACACGCTGA
ACATCCACCCGTCGATGCGACTCAGGATCGATCACTACCTGGAGAACCGCGCGACGCCCTACCTTGGCTGA

Upstream 100 bases:

>100_bases
CCCCGTCATGCACCTACGCGCCCAGTCCGGTGGCCTGTTCGACCACTACGCCGCCAGCTTCGAGCGCATCTGGGCCACCA
CCGAAGGAGCCTGAACCCTC

Downstream 100 bases:

>100_bases
GCCGCCGCAAGCCGCGCGGTGGTGCGCTCGACGGTGGTTTGGAGATCCGGCCGCGCCCGAGTGACCGACCGGTGCACGAC
CGACCCCTCGCCGTAGCGAG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MARIDYFNDPNAPKANSVVPSVTAVVTDEAGRILMVHKTDNDLWALPGGGMDLGESITDAAVRETKEETGIDIEVTGLIG
VYTNPRHVLAYDDGEVRQQFSLCFTTRNLGGELRTSSETKEVQFVAPEDLDTLNIHPSMRLRIDHYLENRATPYLG

Sequences:

>Translated_156_residues
MARIDYFNDPNAPKANSVVPSVTAVVTDEAGRILMVHKTDNDLWALPGGGMDLGESITDAAVRETKEETGIDIEVTGLIG
VYTNPRHVLAYDDGEVRQQFSLCFTTRNLGGELRTSSETKEVQFVAPEDLDTLNIHPSMRLRIDHYLENRATPYLG
>Mature_155_residues
ARIDYFNDPNAPKANSVVPSVTAVVTDEAGRILMVHKTDNDLWALPGGGMDLGESITDAAVRETKEETGIDIEVTGLIGV
YTNPRHVLAYDDGEVRQQFSLCFTTRNLGGELRTSSETKEVQFVAPEDLDTLNIHPSMRLRIDHYLENRATPYLG

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 17249; Mature: 17118

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIDYFNDPNAPKANSVVPSVTAVVTDEAGRILMVHKTDNDLWALPGGGMDLGESITDA
CCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHH
AVRETKEETGIDIEVTGLIGVYTNPRHVLAYDDGEVRQQFSLCFTTRNLGGELRTSSETK
HHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCHHHHHHHHHEEEECCCCCCEECCCCCC
EVQFVAPEDLDTLNIHPSMRLRIDHYLENRATPYLG
EEEEECCCCCCEEECCCCEEEEEEEHHHCCCCCCCC
>Mature Secondary Structure 
ARIDYFNDPNAPKANSVVPSVTAVVTDEAGRILMVHKTDNDLWALPGGGMDLGESITDA
CEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHH
AVRETKEETGIDIEVTGLIGVYTNPRHVLAYDDGEVRQQFSLCFTTRNLGGELRTSSETK
HHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCHHHHHHHHHEEEECCCCCCEECCCCCC
EVQFVAPEDLDTLNIHPSMRLRIDHYLENRATPYLG
EEEEECCCCCCEEECCCCEEEEEEEHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]