| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317076
Identifier: 158317076
GI number: 158317076
Start: 6408825
End: 6411098
Strand: Reverse
Name: 158317076
Synonym: Franean1_5320
Alternate gene names: NA
Gene position: 6411098-6408825 (Counterclockwise)
Preceding gene: 158317077
Following gene: 158317074
Centisome position: 71.38
GC content: 73.53
Gene sequence:
>2274_bases ATGGGGCCACCAGCCGAAGGGCGGTCCAGGCCGCTCGGTACCGTGCCGAGGGTGAGCAGGTCGAGTGATCCCGGCGCCGG CGCGGTCTCCGCGCCGGACGAGCCGTCCGACCGGATCGGCAAGGCCGCCGCGGACCAGATCGGCACGGTCGTCCCGGACC GCCTGGTCGTGACGCCTGAGCCGCTGCCCCGGCGGCTGTGGCGTCGCTGCCAGGAGGTCAGCACGGCCGGCCGGTACGTG GCGGTCCTGGCCTTGACCAGTGCGACGGTGGCCGTCCTGCTGCGGCACAACCTGTTCCCGTACCTGTCGGTCAACAACGA CGAGGTCATCTACCTCCTGCACGCCCGGACGCTGGCGGACGGCCACCTCTTTCCGTCTGCGCCTGATCCAGCCGCGTCGT ACGCACCCTGGCTCGCCGCCATCTCGGGTGATCACTTCGTTCTGAAGTACACGCCGTTCGTCCCGGGGTTGTTCGCGTTG GGCCTCATGCTGACGGGCAGCGTCTCGCCGGTGCTGGCGGTTATCGCGGCGGCGGCGGTGATCGTTACCTACCTGCTCGG TGTCGAGCTGGCGGGGGAGCGGAGGGTCGCGGCGCTGGCCGCGACGCTGCTGGCCCTCTCCCCGTTGGTGATCGTGCAGA GCGCGCTGGTGCTGAGCTACCTGCCGGTGCTCGTGCTGATGGAGCTGACGTTGCTCGGCCTGCTCCGAGGGCTGAGAGCC GGCGGGCTGAGAGCCGGCGGGCTGAGCGATGGCGGTCGGCGCTCCGCGCGGCACGGCGGGCGGGCGCTTGCCGGAGCGGG GCTCGCGGTCGGCGTGGCCGTGGCGGTGCGGCCGTATGACGTGGTCCTCCTGCTCGCCCCGGTGGCGGTCTGGGGCGTCG TGACGGCGCGCAGGTCCGGGCGGCTCGGGTGGGCCCTGCGCTGGACGGCTGCCGGGCTCGTGCTCCCGGCCGCGATCCTG CTGGCGTCCAATGCCGCGGCGACCGGCAGCCCGTTCAGGTTGCCGTTCGCGCTGCTCGAATCGGACGACAAGCTCGGGTT CGGCGTGCGCAGGCTGTACCCGTCGGACGGCGGGCACGACTTCGGGCTCGGTGACGGACTGGCGTCGGTCGGGGATCATC TCTGGCTGCTCGGTGGCTGGGCCTGCGGCGGGGTGGTTCTCGCCGTCGCCGCGATCGTGGCGGCCGCGCGGCGCCGGCTG AATGGCCCGGGGTACGCCCTCGGCGTCGGCATGGTGCTGTTCGTGGTCGGTTACATCGGCTTCTGGGGGGCGTGGAACGC GGCGGAGCTGTGGGGCGGCATCCGATACGTCGGGCCGTTCTACCTGATGCCTGTGCTGATCGGGCTCGTGCACCTCGGTG CGCGCGGGCTGGTCGACCTCGCCGGCTGGTCACGGCGGCGGGCGGCACGGACGGTGACCGGGGTGTGCGCCGCGGGTGTC GTCGGGCTGACGACGTTCGTCCTCGTCGGCGCGATCGACGCGAACGCGACGATGACGGACCACGACCGTGACCTGGCGGC GATGCTGCGGGCCCTGCCCGGGCGGTCCCTGGTACTGGTGGCCGCCAGCCCGCCCTACCTGGGCCATCCGAGCGGTGTCA CCACCAACGGGGCCGATCTCGACGGTGCCGACGGTGACGGGCCGTTGCTGTTCGCGGTCTCGCGGGGGGTGGCCGACCTG GAGGTCGTCGCCGACCACCCCGACCGCACGCCGTACCTGCTCCGCATGCCGCCGGCCTACAACCGGTCCCCGGGCTCGGT GACGCGCTCGCGGGTGGACGCGCTCACGGTGGCCACCGGTCGTACGGTCGGCGTCGAGGTCAGCGTGGACGCGCCGCCGC GAGGGACGCGCGCGGCCCAGCTGGTGTTCGAAGCCGGTGGGGTCCGGCTGACCTACCCGGTCTCAGCGAACGGGCCCGTG ACCGCGCGGCTCACCCTTGACGCGGACGGCCTCGACACCGACGACGTCACGGAAGTCGTGATCTACGGTGGCGGCGAGAC CAGGGGATCTCCGGCGGGCGCGGCCACCGGGCGCCCGGCCGGCCGGGCGAAGATCACGAAGGTGCCCGGGGTGGGGACGT CCGTGACGGTGTCGCTGCTGGCCATCCCGGCGTCCGGTGGCCGTGCGCGGACCGTCGACCGGCAGGTGATCCCCGTCCTC GTCGAGGATCCCAGCGGCGAGACGCCGGGCGATGTGGCAGTCCTCGCACCGAGCGCCCACGTGGACGAGACCGGCCAGGG CCCGCGGCCCGCCGTCCGCATCGCGCTGTCCTGA
Upstream 100 bases:
>100_bases TCGTCGGCGAGGTCCGCCTGCTGGGGCTGGGCGGGGCCTTCGGATAGTGGGGTCGCCGGCAATCGCGTAATGGGCGGGTC TGACCGACATGCGGTGACCG
Downstream 100 bases:
>100_bases TCCGCGGCGCGCCTGATCCGCGGCGCGCTGTTGTGAAAGTCAGGCCAGTCGGTGGATCGGTGGCGGGGCGTAGGTGCCGC TGAGTACCTCCTTGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 757; Mature: 756
Protein sequence:
>757_residues MGPPAEGRSRPLGTVPRVSRSSDPGAGAVSAPDEPSDRIGKAAADQIGTVVPDRLVVTPEPLPRRLWRRCQEVSTAGRYV AVLALTSATVAVLLRHNLFPYLSVNNDEVIYLLHARTLADGHLFPSAPDPAASYAPWLAAISGDHFVLKYTPFVPGLFAL GLMLTGSVSPVLAVIAAAAVIVTYLLGVELAGERRVAALAATLLALSPLVIVQSALVLSYLPVLVLMELTLLGLLRGLRA GGLRAGGLSDGGRRSARHGGRALAGAGLAVGVAVAVRPYDVVLLLAPVAVWGVVTARRSGRLGWALRWTAAGLVLPAAIL LASNAAATGSPFRLPFALLESDDKLGFGVRRLYPSDGGHDFGLGDGLASVGDHLWLLGGWACGGVVLAVAAIVAAARRRL NGPGYALGVGMVLFVVGYIGFWGAWNAAELWGGIRYVGPFYLMPVLIGLVHLGARGLVDLAGWSRRRAARTVTGVCAAGV VGLTTFVLVGAIDANATMTDHDRDLAAMLRALPGRSLVLVAASPPYLGHPSGVTTNGADLDGADGDGPLLFAVSRGVADL EVVADHPDRTPYLLRMPPAYNRSPGSVTRSRVDALTVATGRTVGVEVSVDAPPRGTRAAQLVFEAGGVRLTYPVSANGPV TARLTLDADGLDTDDVTEVVIYGGGETRGSPAGAATGRPAGRAKITKVPGVGTSVTVSLLAIPASGGRARTVDRQVIPVL VEDPSGETPGDVAVLAPSAHVDETGQGPRPAVRIALS
Sequences:
>Translated_757_residues MGPPAEGRSRPLGTVPRVSRSSDPGAGAVSAPDEPSDRIGKAAADQIGTVVPDRLVVTPEPLPRRLWRRCQEVSTAGRYV AVLALTSATVAVLLRHNLFPYLSVNNDEVIYLLHARTLADGHLFPSAPDPAASYAPWLAAISGDHFVLKYTPFVPGLFAL GLMLTGSVSPVLAVIAAAAVIVTYLLGVELAGERRVAALAATLLALSPLVIVQSALVLSYLPVLVLMELTLLGLLRGLRA GGLRAGGLSDGGRRSARHGGRALAGAGLAVGVAVAVRPYDVVLLLAPVAVWGVVTARRSGRLGWALRWTAAGLVLPAAIL LASNAAATGSPFRLPFALLESDDKLGFGVRRLYPSDGGHDFGLGDGLASVGDHLWLLGGWACGGVVLAVAAIVAAARRRL NGPGYALGVGMVLFVVGYIGFWGAWNAAELWGGIRYVGPFYLMPVLIGLVHLGARGLVDLAGWSRRRAARTVTGVCAAGV VGLTTFVLVGAIDANATMTDHDRDLAAMLRALPGRSLVLVAASPPYLGHPSGVTTNGADLDGADGDGPLLFAVSRGVADL EVVADHPDRTPYLLRMPPAYNRSPGSVTRSRVDALTVATGRTVGVEVSVDAPPRGTRAAQLVFEAGGVRLTYPVSANGPV TARLTLDADGLDTDDVTEVVIYGGGETRGSPAGAATGRPAGRAKITKVPGVGTSVTVSLLAIPASGGRARTVDRQVIPVL VEDPSGETPGDVAVLAPSAHVDETGQGPRPAVRIALS >Mature_756_residues GPPAEGRSRPLGTVPRVSRSSDPGAGAVSAPDEPSDRIGKAAADQIGTVVPDRLVVTPEPLPRRLWRRCQEVSTAGRYVA VLALTSATVAVLLRHNLFPYLSVNNDEVIYLLHARTLADGHLFPSAPDPAASYAPWLAAISGDHFVLKYTPFVPGLFALG LMLTGSVSPVLAVIAAAAVIVTYLLGVELAGERRVAALAATLLALSPLVIVQSALVLSYLPVLVLMELTLLGLLRGLRAG GLRAGGLSDGGRRSARHGGRALAGAGLAVGVAVAVRPYDVVLLLAPVAVWGVVTARRSGRLGWALRWTAAGLVLPAAILL ASNAAATGSPFRLPFALLESDDKLGFGVRRLYPSDGGHDFGLGDGLASVGDHLWLLGGWACGGVVLAVAAIVAAARRRLN GPGYALGVGMVLFVVGYIGFWGAWNAAELWGGIRYVGPFYLMPVLIGLVHLGARGLVDLAGWSRRRAARTVTGVCAAGVV GLTTFVLVGAIDANATMTDHDRDLAAMLRALPGRSLVLVAASPPYLGHPSGVTTNGADLDGADGDGPLLFAVSRGVADLE VVADHPDRTPYLLRMPPAYNRSPGSVTRSRVDALTVATGRTVGVEVSVDAPPRGTRAAQLVFEAGGVRLTYPVSANGPVT ARLTLDADGLDTDDVTEVVIYGGGETRGSPAGAATGRPAGRAKITKVPGVGTSVTVSLLAIPASGGRARTVDRQVIPVLV EDPSGETPGDVAVLAPSAHVDETGQGPRPAVRIALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77841; Mature: 77710
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPPAEGRSRPLGTVPRVSRSSDPGAGAVSAPDEPSDRIGKAAADQIGTVVPDRLVVTPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCC PLPRRLWRRCQEVSTAGRYVAVLALTSATVAVLLRHNLFPYLSVNNDEVIYLLHARTLAD HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEECC GHLFPSAPDPAASYAPWLAAISGDHFVLKYTPFVPGLFALGLMLTGSVSPVLAVIAAAAV CCCCCCCCCCCHHHCCHHEEECCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH IVTYLLGVELAGERRVAALAATLLALSPLVIVQSALVLSYLPVLVLMELTLLGLLRGLRA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGLRAGGLSDGGRRSARHGGRALAGAGLAVGVAVAVRPYDVVLLLAPVAVWGVVTARRSG CCCCCCCCCCCCCHHHHCCCCEECCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC RLGWALRWTAAGLVLPAAILLASNAAATGSPFRLPFALLESDDKLGFGVRRLYPSDGGHD CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHEECCCCCCCCCEEEECCCCCCCC FGLGDGLASVGDHLWLLGGWACGGVVLAVAAIVAAARRRLNGPGYALGVGMVLFVVGYIG CCCCCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FWGAWNAAELWGGIRYVGPFYLMPVLIGLVHLGARGLVDLAGWSRRRAARTVTGVCAAGV HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH VGLTTFVLVGAIDANATMTDHDRDLAAMLRALPGRSLVLVAASPPYLGHPSGVTTNGADL HHHHHHHHHEEECCCCEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC DGADGDGPLLFAVSRGVADLEVVADHPDRTPYLLRMPPAYNRSPGSVTRSRVDALTVATG CCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHEEEEECC RTVGVEVSVDAPPRGTRAAQLVFEAGGVRLTYPVSANGPVTARLTLDADGLDTDDVTEVV CEEEEEEEECCCCCCCHHHEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE IYGGGETRGSPAGAATGRPAGRAKITKVPGVGTSVTVSLLAIPASGGRARTVDRQVIPVL EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEECCCCEEEEE VEDPSGETPGDVAVLAPSAHVDETGQGPRPAVRIALS EECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure GPPAEGRSRPLGTVPRVSRSSDPGAGAVSAPDEPSDRIGKAAADQIGTVVPDRLVVTPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCC PLPRRLWRRCQEVSTAGRYVAVLALTSATVAVLLRHNLFPYLSVNNDEVIYLLHARTLAD HHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEEECC GHLFPSAPDPAASYAPWLAAISGDHFVLKYTPFVPGLFALGLMLTGSVSPVLAVIAAAAV CCCCCCCCCCCHHHCCHHEEECCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHH IVTYLLGVELAGERRVAALAATLLALSPLVIVQSALVLSYLPVLVLMELTLLGLLRGLRA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GGLRAGGLSDGGRRSARHGGRALAGAGLAVGVAVAVRPYDVVLLLAPVAVWGVVTARRSG CCCCCCCCCCCCCHHHHCCCCEECCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCC RLGWALRWTAAGLVLPAAILLASNAAATGSPFRLPFALLESDDKLGFGVRRLYPSDGGHD CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHEECCCCCCCCCEEEECCCCCCCC FGLGDGLASVGDHLWLLGGWACGGVVLAVAAIVAAARRRLNGPGYALGVGMVLFVVGYIG CCCCCCHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH FWGAWNAAELWGGIRYVGPFYLMPVLIGLVHLGARGLVDLAGWSRRRAARTVTGVCAAGV HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHH VGLTTFVLVGAIDANATMTDHDRDLAAMLRALPGRSLVLVAASPPYLGHPSGVTTNGADL HHHHHHHHHEEECCCCEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCC DGADGDGPLLFAVSRGVADLEVVADHPDRTPYLLRMPPAYNRSPGSVTRSRVDALTVATG CCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCHHHHHHHEEEEECC RTVGVEVSVDAPPRGTRAAQLVFEAGGVRLTYPVSANGPVTARLTLDADGLDTDDVTEVV CEEEEEEEECCCCCCCHHHEEEEECCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE IYGGGETRGSPAGAATGRPAGRAKITKVPGVGTSVTVSLLAIPASGGRARTVDRQVIPVL EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEECCCCEEEEE VEDPSGETPGDVAVLAPSAHVDETGQGPRPAVRIALS EECCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA