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The map label for this gene is ssb [H]

Identifier: 158317077

GI number: 158317077

Start: 6411152

End: 6412069

Strand: Reverse

Name: ssb [H]

Synonym: Franean1_5321

Alternate gene names: 158317077

Gene position: 6412069-6411152 (Counterclockwise)

Preceding gene: 158317079

Following gene: 158317076

Centisome position: 71.39

GC content: 72.98

Gene sequence:

>918_bases
GTGGTGGGCCGCCGTCCTCCGGGTCGTCTCCCTGTCCCCGAGATGTTCGCCAAGGAGCCTTCCATGCTCGACACCACGAT
CACACTGATCGGCAATCTCGTGGAGAATCCGGTGCTGCGGGTGACCGCCAGCGGTGTCTCCGTCTGCGGTTTCCGCGTCG
CCTCCACGCCGCGCCGGTACGACCGCTCCGAACAGCGCTGGGTGGACGGCAACACCCTCTACCTGCGCGTCTCCTGCTGG
CGTCAGCTCGCCGAGAACGTCTCGGTCAGCCTGTCGCGGGGCGACCGGGCGCTCGTCGTCGGGCGCCTGCGGCAGAACAA
CTTCGAGACGCAGGACGGCGATCGGCGGGTCACCTACGAGATCGACGCGGACGCGGTCGCGGCGGAACTCACCTGGCGTC
CGGTCGACGTCCGGCGGGTCGCGCGTGGGGCCGGCCCCGCTGACGAGGTTCCGCTGCCGGAGACAGGCGAGCACCCGGTT
GACCCCTTCGGCGCCGACTCCACCGACCTTGACGGCGGCGGTGCGGAGGAGAGCGTCGGCGCGGGGGCAACGGGAGCCGG
TGGCCTGGTTCCCGCGGAGGCGGTCCGGCAGTTGGCCGTCGAGACCTCCACCAACGGTGGGCCGGGGCTCACGCAGGCGG
GGTCGGACCTGGTCGATGCCGTCTCGCGCGACTCTGTCCCGGTCGACTTCGCGCCGGTCGGCGGCAGCGCGCAGGCCGCC
GGAGCGGCGCCCCTCGAGTGGTCCGAGACCGGCCCGACGCCGGCTTCGCTGTTCACGGAGGGCGGGCGTGGCGGTGAGCT
CACGACGCAGGCCTTCCGCACCCCGAGCACCTCCGCCTCCTCCGGGGGCGTCACCTTCGGCCTCGCTGACGTCGTCGGCG
AGGTCCGCCTGCTGGGGCTGGGCGGGGCCTTCGGATAG

Upstream 100 bases:

>100_bases
AGCTGACAAGAACAGGTTCCCATCACGTGGACGGCGGCGCAGAGTGATGGCGTGGGTGCGCGGCCGGCCAGCTCTCGCCG
CCTGGACCTCCGGGTCCGTT

Downstream 100 bases:

>100_bases
TGGGGTCGCCGGCAATCGCGTAATGGGCGGGTCTGACCGACATGCGGTGACCGATGGGGCCACCAGCCGAAGGGCGGTCC
AGGCCGCTCGGTACCGTGCC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MVGRRPPGRLPVPEMFAKEPSMLDTTITLIGNLVENPVLRVTASGVSVCGFRVASTPRRYDRSEQRWVDGNTLYLRVSCW
RQLAENVSVSLSRGDRALVVGRLRQNNFETQDGDRRVTYEIDADAVAAELTWRPVDVRRVARGAGPADEVPLPETGEHPV
DPFGADSTDLDGGGAEESVGAGATGAGGLVPAEAVRQLAVETSTNGGPGLTQAGSDLVDAVSRDSVPVDFAPVGGSAQAA
GAAPLEWSETGPTPASLFTEGGRGGELTTQAFRTPSTSASSGGVTFGLADVVGEVRLLGLGGAFG

Sequences:

>Translated_305_residues
MVGRRPPGRLPVPEMFAKEPSMLDTTITLIGNLVENPVLRVTASGVSVCGFRVASTPRRYDRSEQRWVDGNTLYLRVSCW
RQLAENVSVSLSRGDRALVVGRLRQNNFETQDGDRRVTYEIDADAVAAELTWRPVDVRRVARGAGPADEVPLPETGEHPV
DPFGADSTDLDGGGAEESVGAGATGAGGLVPAEAVRQLAVETSTNGGPGLTQAGSDLVDAVSRDSVPVDFAPVGGSAQAA
GAAPLEWSETGPTPASLFTEGGRGGELTTQAFRTPSTSASSGGVTFGLADVVGEVRLLGLGGAFG
>Mature_305_residues
MVGRRPPGRLPVPEMFAKEPSMLDTTITLIGNLVENPVLRVTASGVSVCGFRVASTPRRYDRSEQRWVDGNTLYLRVSCW
RQLAENVSVSLSRGDRALVVGRLRQNNFETQDGDRRVTYEIDADAVAAELTWRPVDVRRVARGAGPADEVPLPETGEHPV
DPFGADSTDLDGGGAEESVGAGATGAGGLVPAEAVRQLAVETSTNGGPGLTQAGSDLVDAVSRDSVPVDFAPVGGSAQAA
GAAPLEWSETGPTPASLFTEGGRGGELTTQAFRTPSTSASSGGVTFGLADVVGEVRLLGLGGAFG

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 31600; Mature: 31600

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRRPPGRLPVPEMFAKEPSMLDTTITLIGNLVENPVLRVTASGVSVCGFRVASTPRRY
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCHHC
DRSEQRWVDGNTLYLRVSCWRQLAENVSVSLSRGDRALVVGRLRQNNFETQDGDRRVTYE
CCCHHEEECCCEEEEEHHHHHHHHHCCEEEECCCCEEEEEEEHHCCCCCCCCCCEEEEEE
IDADAVAAELTWRPVDVRRVARGAGPADEVPLPETGEHPVDPFGADSTDLDGGGAEESVG
ECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGATGAGGLVPAEAVRQLAVETSTNGGPGLTQAGSDLVDAVSRDSVPVDFAPVGGSAQAA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCC
GAAPLEWSETGPTPASLFTEGGRGGELTTQAFRTPSTSASSGGVTFGLADVVGEVRLLGL
CCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHCCEEEEEC
GGAFG
CCCCC
>Mature Secondary Structure
MVGRRPPGRLPVPEMFAKEPSMLDTTITLIGNLVENPVLRVTASGVSVCGFRVASTPRRY
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCHHC
DRSEQRWVDGNTLYLRVSCWRQLAENVSVSLSRGDRALVVGRLRQNNFETQDGDRRVTYE
CCCHHEEECCCEEEEEHHHHHHHHHCCEEEECCCCEEEEEEEHHCCCCCCCCCCEEEEEE
IDADAVAAELTWRPVDVRRVARGAGPADEVPLPETGEHPVDPFGADSTDLDGGGAEESVG
ECCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGATGAGGLVPAEAVRQLAVETSTNGGPGLTQAGSDLVDAVSRDSVPVDFAPVGGSAQAA
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCC
GAAPLEWSETGPTPASLFTEGGRGGELTTQAFRTPSTSASSGGVTFGLADVVGEVRLLGL
CCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCEEEEHHHHHCCEEEEEC
GGAFG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]