Click here to switch to the map view.

The map label for this gene is yjjK [C]

Identifier: 158317074

GI number: 158317074

Start: 6405505

End: 6407187

Strand: Reverse

Name: yjjK [C]

Synonym: Franean1_5318

Alternate gene names: 158317074

Gene position: 6407187-6405505 (Counterclockwise)

Preceding gene: 158317076

Following gene: 158317071

Centisome position: 71.33

GC content: 69.93

Gene sequence:

>1683_bases
ATGGCGCAGTACGTCTTCCAGATGCGCAAGGCCCGCAAGGCCCACGGCGACAAGGTGATCCTCGACGACGTCACCCTGGC
GTTCCTGCCCGGCGCGAAGATCGGCGTCGTCGGGCCGAACGGTGCCGGGAAGTCGTCGCTACTCAAGATCATGGCCGGCC
TCGACCACCCGAGCAACGGCGACGCGATCCTGAGCCCCGGCTACACGGTCGGCATGCTCGCGCAGGAGCCGCGGCTCGAC
GAGGCCAAGGACGTCCGCGGCAACGTCGAGGACGGCGTCCGCGAGATCCGCGCGGTGCTTGCCCGGTACGAGGAGATCAA
CGAGAAGATGGCCGCGCCCGACGCGGACTTCGACACGCTCCTCGCCGACCAGGCGGCGCTGATCGACAAGATCGAGGCGG
CGAACGCCTGGGAGCTCGACAGCCAGATCGACCAGGCGATGGACGCCCTGCGCCTGCCGCCCGGCGACGCGGACGTCACC
GCGCTCTCCGGTGGTGAGCGCCGCCGGGTGGCGCTGTGCAAGCTGCTGCTCGAGGCGCCCGACCTGCTGCTGCTGGACGA
GCCGACCAACCACCTCGACGCGGAGAGCGTCGCCTGGCTGGAGCAGCACCTGGCCCGCTACGCCGGGGCGGTGCTGGCCG
TCACGCACGACCGGTACTTCCTCGACAACGTCGCCGGCTGGATCCTCGAGCTCGACCGCGGCCGCGCCCACCCCTACGAG
GGCAACTACTCCACCTACCTGGAGAACAAGGCGTCCCGGCTCAAGGTCGAGGGCCAGAAGGACGCCAAGCGCCGCCGGGC
GCTCGCCCAGGAGCTCGAGTGGGTCCGCTCGAACCCGAAGGCCCGCCAGGCCAAGAGCAAGTCCCGCCTCGCCCGTTACG
AGGAGCTGGCCGCCGAGGCGGACAAGGCCAGGCCGCGCGACTTCGAGGAGATCCAGATCCCGCCCGGCCCGCGGCTGGGC
AGCCTGGTGATCGAGACGAAGAAGCTCACCAAGGGCTTCGGTGAGCGGGTGCTCATCGACGACCTGTCGTTCAGCCTGCC
GCGCGGTGGCATCGTCGGCGTGATCGGCCCGAACGGCGTCGGCAAGACCACGCTGTTCACGATGCTTGTCGGCCAGGCGT
CGCCTGATTCCGGCGAGCTGCAGATCGGCGAGACGGTCGACATCGCCTACGTGGACCAGTCCCGCGGCGGTCTCGACGCG
AAGAAGAACGTGTGGGAGATCGTCTCCGACGGGCTGGACCACATCGTCGTCGGGAAGACCGACATCCCGAGCCGGGCGTA
CGTGTCGTCGTTCGGGTTCAAGGGGCCTGACCAGCAGAAGCCGGTCGGCGTGCTCTCCGGCGGAGAGCGCAACCGGCTGA
ACCTGGCGCTGACCCTCAAGCGCGGCGGCAACGTGCTGCTGCTCGACGAGCCCACGAACGACCTGGACGTCGAGACCCTG
CGGTCGCTGGAGGAGGCGCTGCTGGAGTTCCCGGGCTGCGCCGTGGTCGTCTCCCACGACCGGTGGTTCCTGGACCGGGT
CGCGACGCACATCCTGGCCTGGGAGGGCACCGAGGCCGACCCGGCCCGCTGGTTCTGGTACGAGGGCAACTTCGCCGACT
ACGAGACCAACAAGGTCGAGCGGCTCGGTGCGGACGCGGCCCGCCCGCACCGGGTGACGTACCGCAAGCTCACCCGCGAC
TAG

Upstream 100 bases:

>100_bases
CATCGGGCGGGACCGTCGGCGGCTCACGGTGGAATCGCCGGGGGCCCGCGATGGGATCACCGCCGTGGGGCTTCTGGGCG
CCATGCCCTAGGGTTGACGC

Downstream 100 bases:

>100_bases
CCGCCGCGAAACCGACCGTCGCGGGCCGGGAAGTCCTTCGACTTCCCGGCCCGCGACGCGTCGAGACCGGAGATCAGCCC
GGGCGGTTCTGTAGGGAGTT

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MAQYVFQMRKARKAHGDKVILDDVTLAFLPGAKIGVVGPNGAGKSSLLKIMAGLDHPSNGDAILSPGYTVGMLAQEPRLD
EAKDVRGNVEDGVREIRAVLARYEEINEKMAAPDADFDTLLADQAALIDKIEAANAWELDSQIDQAMDALRLPPGDADVT
ALSGGERRRVALCKLLLEAPDLLLLDEPTNHLDAESVAWLEQHLARYAGAVLAVTHDRYFLDNVAGWILELDRGRAHPYE
GNYSTYLENKASRLKVEGQKDAKRRRALAQELEWVRSNPKARQAKSKSRLARYEELAAEADKARPRDFEEIQIPPGPRLG
SLVIETKKLTKGFGERVLIDDLSFSLPRGGIVGVIGPNGVGKTTLFTMLVGQASPDSGELQIGETVDIAYVDQSRGGLDA
KKNVWEIVSDGLDHIVVGKTDIPSRAYVSSFGFKGPDQQKPVGVLSGGERNRLNLALTLKRGGNVLLLDEPTNDLDVETL
RSLEEALLEFPGCAVVVSHDRWFLDRVATHILAWEGTEADPARWFWYEGNFADYETNKVERLGADAARPHRVTYRKLTRD

Sequences:

>Translated_560_residues
MAQYVFQMRKARKAHGDKVILDDVTLAFLPGAKIGVVGPNGAGKSSLLKIMAGLDHPSNGDAILSPGYTVGMLAQEPRLD
EAKDVRGNVEDGVREIRAVLARYEEINEKMAAPDADFDTLLADQAALIDKIEAANAWELDSQIDQAMDALRLPPGDADVT
ALSGGERRRVALCKLLLEAPDLLLLDEPTNHLDAESVAWLEQHLARYAGAVLAVTHDRYFLDNVAGWILELDRGRAHPYE
GNYSTYLENKASRLKVEGQKDAKRRRALAQELEWVRSNPKARQAKSKSRLARYEELAAEADKARPRDFEEIQIPPGPRLG
SLVIETKKLTKGFGERVLIDDLSFSLPRGGIVGVIGPNGVGKTTLFTMLVGQASPDSGELQIGETVDIAYVDQSRGGLDA
KKNVWEIVSDGLDHIVVGKTDIPSRAYVSSFGFKGPDQQKPVGVLSGGERNRLNLALTLKRGGNVLLLDEPTNDLDVETL
RSLEEALLEFPGCAVVVSHDRWFLDRVATHILAWEGTEADPARWFWYEGNFADYETNKVERLGADAARPHRVTYRKLTRD
>Mature_559_residues
AQYVFQMRKARKAHGDKVILDDVTLAFLPGAKIGVVGPNGAGKSSLLKIMAGLDHPSNGDAILSPGYTVGMLAQEPRLDE
AKDVRGNVEDGVREIRAVLARYEEINEKMAAPDADFDTLLADQAALIDKIEAANAWELDSQIDQAMDALRLPPGDADVTA
LSGGERRRVALCKLLLEAPDLLLLDEPTNHLDAESVAWLEQHLARYAGAVLAVTHDRYFLDNVAGWILELDRGRAHPYEG
NYSTYLENKASRLKVEGQKDAKRRRALAQELEWVRSNPKARQAKSKSRLARYEELAAEADKARPRDFEEIQIPPGPRLGS
LVIETKKLTKGFGERVLIDDLSFSLPRGGIVGVIGPNGVGKTTLFTMLVGQASPDSGELQIGETVDIAYVDQSRGGLDAK
KNVWEIVSDGLDHIVVGKTDIPSRAYVSSFGFKGPDQQKPVGVLSGGERNRLNLALTLKRGGNVLLLDEPTNDLDVETLR
SLEEALLEFPGCAVVVSHDRWFLDRVATHILAWEGTEADPARWFWYEGNFADYETNKVERLGADAARPHRVTYRKLTRD

Specific function: Probably part of an ABC transporter complex. Probably responsible for energy coupling to the transport system [H]

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=518, Percent_Identity=29.7297297297297, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=29.014598540146, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=29.014598540146, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI27881506, Length=524, Percent_Identity=27.8625954198473, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI10947137, Length=524, Percent_Identity=27.8625954198473, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI171184400, Length=233, Percent_Identity=28.755364806867, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI2367384, Length=560, Percent_Identity=57.1428571428571, Blast_Score=637, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=513, Percent_Identity=35.8674463937622, Blast_Score=299, Evalue=4e-82,
Organism=Escherichia coli, GI1789751, Length=542, Percent_Identity=32.2878228782288, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=30.9124767225326, Blast_Score=230, Evalue=2e-61,
Organism=Escherichia coli, GI48994943, Length=500, Percent_Identity=24.8, Blast_Score=105, Evalue=8e-24,
Organism=Escherichia coli, GI87081782, Length=517, Percent_Identity=24.9516441005803, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87081709, Length=196, Percent_Identity=32.1428571428571, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787029, Length=253, Percent_Identity=28.0632411067194, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1790467, Length=238, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=28.9473684210526, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI87081834, Length=203, Percent_Identity=31.5270935960591, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=201, Percent_Identity=31.8407960199005, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1789891, Length=225, Percent_Identity=27.5555555555556, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789873, Length=231, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787164, Length=177, Percent_Identity=28.2485875706215, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1789586, Length=214, Percent_Identity=28.9719626168224, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=27.8947368421053, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=26.7605633802817, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=568, Percent_Identity=27.112676056338, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=31.0280373831776, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=26.9230769230769, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI212646699, Length=192, Percent_Identity=28.125, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=210, Percent_Identity=28.0952380952381, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=191, Percent_Identity=27.2251308900524, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=235, Percent_Identity=24.2553191489362, Blast_Score=67, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=539, Percent_Identity=29.8701298701299, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321121, Length=566, Percent_Identity=28.6219081272085, Blast_Score=182, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6323278, Length=389, Percent_Identity=26.7352185089974, Blast_Score=124, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6324314, Length=388, Percent_Identity=26.2886597938144, Blast_Score=116, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=27.0833333333333, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6320266, Length=535, Percent_Identity=23.1775700934579, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24641342, Length=549, Percent_Identity=28.5974499089253, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24666836, Length=511, Percent_Identity=30.5283757338552, Blast_Score=192, Evalue=6e-49,
Organism=Drosophila melanogaster, GI24642252, Length=540, Percent_Identity=27.037037037037, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI18859989, Length=540, Percent_Identity=27.037037037037, Blast_Score=173, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007406 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61655; Mature: 61524

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYVFQMRKARKAHGDKVILDDVTLAFLPGAKIGVVGPNGAGKSSLLKIMAGLDHPSNG
CHHHHHHHHHHHHHCCCEEEEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
DAILSPGYTVGMLAQEPRLDEAKDVRGNVEDGVREIRAVLARYEEINEKMAAPDADFDTL
CEEECCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LADQAALIDKIEAANAWELDSQIDQAMDALRLPPGDADVTALSGGERRRVALCKLLLEAP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC
DLLLLDEPTNHLDAESVAWLEQHLARYAGAVLAVTHDRYFLDNVAGWILELDRGRAHPYE
CEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCC
GNYSTYLENKASRLKVEGQKDAKRRRALAQELEWVRSNPKARQAKSKSRLARYEELAAEA
CCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DKARPRDFEEIQIPPGPRLGSLVIETKKLTKGFGERVLIDDLSFSLPRGGIVGVIGPNGV
HCCCCCCCCEEECCCCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKTTLFTMLVGQASPDSGELQIGETVDIAYVDQSRGGLDAKKNVWEIVSDGLDHIVVGKT
CHHHHHHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCC
DIPSRAYVSSFGFKGPDQQKPVGVLSGGERNRLNLALTLKRGGNVLLLDEPTNDLDVETL
CCCCHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHH
RSLEEALLEFPGCAVVVSHDRWFLDRVATHILAWEGTEADPARWFWYEGNFADYETNKVE
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCHHH
RLGADAARPHRVTYRKLTRD
HHCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
AQYVFQMRKARKAHGDKVILDDVTLAFLPGAKIGVVGPNGAGKSSLLKIMAGLDHPSNG
HHHHHHHHHHHHHCCCEEEEECEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
DAILSPGYTVGMLAQEPRLDEAKDVRGNVEDGVREIRAVLARYEEINEKMAAPDADFDTL
CEEECCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LADQAALIDKIEAANAWELDSQIDQAMDALRLPPGDADVTALSGGERRRVALCKLLLEAP
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCC
DLLLLDEPTNHLDAESVAWLEQHLARYAGAVLAVTHDRYFLDNVAGWILELDRGRAHPYE
CEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCC
GNYSTYLENKASRLKVEGQKDAKRRRALAQELEWVRSNPKARQAKSKSRLARYEELAAEA
CCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
DKARPRDFEEIQIPPGPRLGSLVIETKKLTKGFGERVLIDDLSFSLPRGGIVGVIGPNGV
HCCCCCCCCEEECCCCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKTTLFTMLVGQASPDSGELQIGETVDIAYVDQSRGGLDAKKNVWEIVSDGLDHIVVGKT
CHHHHHHHHHCCCCCCCCCEEECCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCC
DIPSRAYVSSFGFKGPDQQKPVGVLSGGERNRLNLALTLKRGGNVLLLDEPTNDLDVETL
CCCCHHHHHHCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHH
RSLEEALLEFPGCAVVVSHDRWFLDRVATHILAWEGTEADPARWFWYEGNFADYETNKVE
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCHHH
RLGADAARPHRVTYRKLTRD
HHCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]