| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317075
Identifier: 158317075
GI number: 158317075
Start: 6407382
End: 6408785
Strand: Direct
Name: 158317075
Synonym: Franean1_5319
Alternate gene names: NA
Gene position: 6407382-6408785 (Clockwise)
Preceding gene: 158317073
Following gene: 158317078
Centisome position: 71.34
GC content: 72.79
Gene sequence:
>1404_bases ATGCGAGCGGATGACCAGCGAGTCGGACTTGCCTGCGAGGCATTCTTCTTCGGGTACCCCCTCGTGTGCGCGGTCCGGCA GATCATCAGGATCGCCCACGACGGGCTCGGGCCGATCGAGCCGGCCGGCTTCAACGCCTTCGCCCACGAGACCGACCCGC CCGGTCCGCACTCACACTTCCTGCACGTCAGCCCGGACGTCCTGGTCTCGCTCGCCCAGGTCGACCTGAGCCCCGGGCCC CTGGTCCTGCACGTGCCGCCGACCCCCGGGCGCTACCTCGTCCTGGAGCTCTACGACGTGTGGCTGAACGTGTTCGCCTA TCTCGGCACCCGGGTCACCGGGGACGACGGTGGCGACATCCTGCTGCTCCCGCCCGGCACGGCGGACGCTTCCAGCACGG CGGACGCTTCCAGCACGGCGGACGCTTCCAGCGCGGCGGACGCTTCCGCGCACGACCGCGTGGTCGAGGCACCGTCGCGG GTCGTCAGCATCATCGCCCGGTTCGGCTACGGCGGGCCGGCGGACCTGCCCGCCGTCCGGGCCCTTCAGGACACGCTGAC CCTGCGCCCGCCCGACCCGGGCGCGCGGCGGCCGGAGGGGCCACCGGACGGCTCCAAGCGCGTCTGCGACGACCTGCGCT TCTGGGAGGAGCTGCGAACCTGGATGCACGCCTTCCCCCCACCGGCCGCGGAACGCGACTACGCCCGCCGGTTCGAGGCA CTCGGCCTGCTGACGGACCCGTCGCCCTACATCGACCCCGATCCGCGGCTCGCCTGGTCGCTGCGCAGCGGCCTGCGCAC GGGCCGGGACGAGCTGGAACGGCTCGCCGCCGCCGGCCGCCGGGCCCATCAGGGCTGGGCCGGCACCCTGCACGAGGCCG ACTACAACCTCGACCGGTTCGGCCCGGGCGTGCTGGACGACCGGCACTGGGAGATCCCGGACCGGGCGCAGGCCCGGATC GCCCGTGCGATGGCAGCGCGCCGGCCGCTCGGCATCGTCCACGCCTACGAGTCGACGTCGGCGTGCTGCTCGGTGGACGC CGACGGGCGCCACCTCACCGGAGCGCACAGCTACCTGTTCCGCCTCCCGCCACCGGCGGTCGACGCGTTCTGGACGGTCG CGATGTACGACGAGCCCGAGGGCTACCTCGTCGACAATCCCCTGCACCGGTACGCGATCGACAGCCGGGACGATCTCGTC CACGCCGCCGACGGAACCGTCCCGATACTGATCCAAAGTGACGCTCCGGCAACGGAGACCGCGACGGACGCCGGTGCGGT GATGCCGGCGAACTGGCTGCCGGCCGCCGCGGGTGACTTCCGGCTGGTGCTGCGGATGTACCTGCCCGGCAAGGAGGTAC TCAGCGGCACCTACGCCCCGCCACCGATCCACCGACTGGCCTGA
Upstream 100 bases:
>100_bases CCGATGTTCAACCGGGCACGAATCGGGTACTCCCCGGAGTTGGGCGAGCACCATCGGCCATCGGACCGGCGTCGATGGGC CGGGGCTCCCGGGAGGCCAC
Downstream 100 bases:
>100_bases CTTTCACAACAGCGCGCCGCGGATCAGGCGCGCCGCGGATCAGGACAGCGCGATGCGGACGGCGGGCCGCGGGCCCTGGC CGGTCTCGTCCACGTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA
Sequences:
>Translated_467_residues MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA >Mature_467_residues MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHFLHVSPDVLVSLAQVDLSPGP LVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDILLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSR VVSIIARFGYGGPADLPAVRALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRFGPGVLDDRHWEIPDRAQARI ARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLFRLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLV HAADGTVPILIQSDAPATETATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50628; Mature: 50628
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHF CCCCCCHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE LHVSPDVLVSLAQVDLSPGPLVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDI EEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCCE LLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSRVVSIIARFGYGGPADLPAVR EEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRF HCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHC GPGVLDDRHWEIPDRAQARIARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCHHHEEE RLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLVHAADGTVPILIQSDAPATET ECCCCCCCCEEEEEEEECCCCCEECCCHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC ATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHCC >Mature Secondary Structure MRADDQRVGLACEAFFFGYPLVCAVRQIIRIAHDGLGPIEPAGFNAFAHETDPPGPHSHF CCCCCCHHCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE LHVSPDVLVSLAQVDLSPGPLVLHVPPTPGRYLVLELYDVWLNVFAYLGTRVTGDDGGDI EEECHHHHHHHHHHCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCEEECCCCCCE LLLPPGTADASSTADASSTADASSAADASAHDRVVEAPSRVVSIIARFGYGGPADLPAVR EEECCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ALQDTLTLRPPDPGARRPEGPPDGSKRVCDDLRFWEELRTWMHAFPPPAAERDYARRFEA HHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LGLLTDPSPYIDPDPRLAWSLRSGLRTGRDELERLAAAGRRAHQGWAGTLHEADYNLDRF HCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHC GPGVLDDRHWEIPDRAQARIARAMAARRPLGIVHAYESTSACCSVDADGRHLTGAHSYLF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCEECCHHHEEE RLPPPAVDAFWTVAMYDEPEGYLVDNPLHRYAIDSRDDLVHAADGTVPILIQSDAPATET ECCCCCCCCEEEEEEEECCCCCEECCCHHHHCCCCCCCEEEECCCCEEEEEECCCCCCCC ATDAGAVMPANWLPAAAGDFRLVLRMYLPGKEVLSGTYAPPPIHRLA CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA