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The map label for this gene is glbO [H]

Identifier: 158317073

GI number: 158317073

Start: 6405012

End: 6405431

Strand: Direct

Name: glbO [H]

Synonym: Franean1_5317

Alternate gene names: 158317073

Gene position: 6405012-6405431 (Clockwise)

Preceding gene: 158317072

Following gene: 158317075

Centisome position: 71.31

GC content: 71.67

Gene sequence:

>420_bases
GTGGCGCAGAATGGACCCGTGAACCAACCGTCACCCGCGCGACCACGCGCAGACTTCTACGAGGCCGTCGGCGGCGAGGC
GACGTTCCGCGCGTTGGTGGCCAGGTTCTACGAGGGGGTGGCCAGCGACCCGGTGCTCCGGCCGCTCTACCCCGACGAGG
ATCTGGCGGCGGCCGAGGAGCGGCTGCGGCTGTTCCTCATCCAGTACTGGGGCGGGCCGACGACGTACAGCGAGCAGCGC
GGCCATCCCCGGCTGCGGATGCGGCACGTGCCGTTCGCGATCGGCCCGGCCGAGCGGGACGCCTGGCTGCGCATCATGGA
ATCCGCGGTCGACAGCCTCGGCCTCGCCCCGGAACACCGCGCCCAGCTCTGGGACTACCTGCTGATGGCCGCGAACTCCC
TACAGAACCGCCCGGGCTGA

Upstream 100 bases:

>100_bases
CCCGTCGAACCGCTCACCTCGGAAGACCCGGCCACGACCACCACCGGGCCGGACGTCCCGTCGATCGAGGCCGGGGCCGC
GGCCGGGGAGCGGGCGGCCA

Downstream 100 bases:

>100_bases
TCTCCGGTCTCGACGCGTCGCGGGCCGGGAAGTCGAAGGACTTCCCGGCCCGCGACGGTCGGTTTCGCGGCGGCTAGTCG
CGGGTGAGCTTGCGGTACGT

Product: globin

Products: NA

Alternate protein names: Hemoglobin-like protein HbO; Truncated hemoglobin; trHbO [H]

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAQNGPVNQPSPARPRADFYEAVGGEATFRALVARFYEGVASDPVLRPLYPDEDLAAAEERLRLFLIQYWGGPTTYSEQR
GHPRLRMRHVPFAIGPAERDAWLRIMESAVDSLGLAPEHRAQLWDYLLMAANSLQNRPG

Sequences:

>Translated_139_residues
MAQNGPVNQPSPARPRADFYEAVGGEATFRALVARFYEGVASDPVLRPLYPDEDLAAAEERLRLFLIQYWGGPTTYSEQR
GHPRLRMRHVPFAIGPAERDAWLRIMESAVDSLGLAPEHRAQLWDYLLMAANSLQNRPG
>Mature_138_residues
AQNGPVNQPSPARPRADFYEAVGGEATFRALVARFYEGVASDPVLRPLYPDEDLAAAEERLRLFLIQYWGGPTTYSEQRG
HPRLRMRHVPFAIGPAERDAWLRIMESAVDSLGLAPEHRAQLWDYLLMAANSLQNRPG

Specific function: Unknown

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15633; Mature: 15502

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNGPVNQPSPARPRADFYEAVGGEATFRALVARFYEGVASDPVLRPLYPDEDLAAAEE
CCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RLRLFLIQYWGGPTTYSEQRGHPRLRMRHVPFAIGPAERDAWLRIMESAVDSLGLAPEHR
HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCHHH
AQLWDYLLMAANSLQNRPG
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQNGPVNQPSPARPRADFYEAVGGEATFRALVARFYEGVASDPVLRPLYPDEDLAAAEE
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RLRLFLIQYWGGPTTYSEQRGHPRLRMRHVPFAIGPAERDAWLRIMESAVDSLGLAPEHR
HHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHCCCCHHH
AQLWDYLLMAANSLQNRPG
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]