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The map label for this gene is ydbC [H]

Identifier: 158317078

GI number: 158317078

Start: 6412433

End: 6413314

Strand: Direct

Name: ydbC [H]

Synonym: Franean1_5322

Alternate gene names: 158317078

Gene position: 6412433-6413314 (Clockwise)

Preceding gene: 158317075

Following gene: 158317086

Centisome position: 71.39

GC content: 69.27

Gene sequence:

>882_bases
ATGTCGACTCAGGCAGCCAGCCGCGACGTGACCGCGGCGGCGAGCGGGACGTTCCTGCTCGGAGGCGAACTACCCGTGAA
CCGGCTCGGTTTCGGCGCGATGCGGATCACCGGGCCGGGCATCTGGGGCGAACCCGCGGACCGGGCGGAGGCCATCGCCG
TACTGCGCAGGTCGGTGGAACTCGGCGTGAACTTCATCGACACGGCCGACTCCTACGGCCCGCACGTCAGCGAGGAGTTG
ATCGCCGAGGCCCTGCACCCCTATCCAGACGGCCTGGTGATCGCGACGAAGGGCGGTCTCACGCGGCAGGGGCCGGACCA
GTGGACTGCCGTGGGACGCGCCCCATACCTGCGCCAGCAGGTCGAACTGTCGCTGCGCCGCCTCAAGCTCGAGCGCATCG
ATCTCTACCAGCTCCACCGCATCGACCCGAGGACTCCCGTCGAGGAGTCCCTCGGCGAACTGCGGGCGCTGCAGCAGGAA
GGCAAGATCCGCCAGATCGGGCTCTCGGAGGTCAGCGTCGCCGAGCTGGAGCACAGCCGGTCGCTGGCGGAGATCGTCAG
CGTGCAGAACCGGTACAACCTCGCCGACCGCGCCTCCGAGGACGTCCTCGACTACGCGGAACGCGAGGGTATCGGCTTCA
TCCCCTGGTTCCCCGTCGCGACCGGTACACTCGCGCGACCAGGCGGAGTCCTCGACGCGATCGCGAAGCGGCACGGCTCG
CAACCCGCGCAGCTGGCGCTGGCATGGCTGCTGCGCAGGTCACCCGTGATGCTGCCGATCCCGGGCACGTCGTCGACCGC
CCACCTGGAGGAGAACGTCGCCGCGGCAGGAGTCAGCCTCACCGACTCCGAGTTCGACGAGCTGGCCAAACTGGTCAGCT
GA

Upstream 100 bases:

>100_bases
CCAGGTTGCCGCCGTGCAGGACGGCGCACCACCCCACCGGCCGGTGTCCTGTCCACCGGTGGCCGGCGACGGTGCCCGCA
CACCTGGAGGAAGGAACGGT

Downstream 100 bases:

>100_bases
CGCCGTACTCGGCCAACCTGCCCCGGTCGGCAACACACGGCCCGACTCCGGTGCCGTGTTGCCGTCCGGCGCCGGACGGC
CGAGTCGGCCAGCAGGCACG

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSTQAASRDVTAAASGTFLLGGELPVNRLGFGAMRITGPGIWGEPADRAEAIAVLRRSVELGVNFIDTADSYGPHVSEEL
IAEALHPYPDGLVIATKGGLTRQGPDQWTAVGRAPYLRQQVELSLRRLKLERIDLYQLHRIDPRTPVEESLGELRALQQE
GKIRQIGLSEVSVAELEHSRSLAEIVSVQNRYNLADRASEDVLDYAEREGIGFIPWFPVATGTLARPGGVLDAIAKRHGS
QPAQLALAWLLRRSPVMLPIPGTSSTAHLEENVAAAGVSLTDSEFDELAKLVS

Sequences:

>Translated_293_residues
MSTQAASRDVTAAASGTFLLGGELPVNRLGFGAMRITGPGIWGEPADRAEAIAVLRRSVELGVNFIDTADSYGPHVSEEL
IAEALHPYPDGLVIATKGGLTRQGPDQWTAVGRAPYLRQQVELSLRRLKLERIDLYQLHRIDPRTPVEESLGELRALQQE
GKIRQIGLSEVSVAELEHSRSLAEIVSVQNRYNLADRASEDVLDYAEREGIGFIPWFPVATGTLARPGGVLDAIAKRHGS
QPAQLALAWLLRRSPVMLPIPGTSSTAHLEENVAAAGVSLTDSEFDELAKLVS
>Mature_292_residues
STQAASRDVTAAASGTFLLGGELPVNRLGFGAMRITGPGIWGEPADRAEAIAVLRRSVELGVNFIDTADSYGPHVSEELI
AEALHPYPDGLVIATKGGLTRQGPDQWTAVGRAPYLRQQVELSLRRLKLERIDLYQLHRIDPRTPVEESLGELRALQQEG
KIRQIGLSEVSVAELEHSRSLAEIVSVQNRYNLADRASEDVLDYAEREGIGFIPWFPVATGTLARPGGVLDAIAKRHGSQ
PAQLALAWLLRRSPVMLPIPGTSSTAHLEENVAAAGVSLTDSEFDELAKLVS

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=281, Percent_Identity=44.1281138790036, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI87081735, Length=307, Percent_Identity=33.5504885993485, Blast_Score=137, Evalue=8e-34,
Organism=Escherichia coli, GI1788070, Length=305, Percent_Identity=29.8360655737705, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1789375, Length=272, Percent_Identity=30.1470588235294, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=30.5660377358491, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789199, Length=335, Percent_Identity=27.4626865671642, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI87082198, Length=264, Percent_Identity=27.6515151515151, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786400, Length=246, Percent_Identity=27.2357723577236, Blast_Score=62, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6325169, Length=327, Percent_Identity=26.2996941896024, Blast_Score=96, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24646155, Length=289, Percent_Identity=28.3737024221453, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24646159, Length=214, Percent_Identity=28.5046728971963, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31697; Mature: 31566

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQAASRDVTAAASGTFLLGGELPVNRLGFGAMRITGPGIWGEPADRAEAIAVLRRSVE
CCCCCCCCCCEEECCCCEEECCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LGVNFIDTADSYGPHVSEELIAEALHPYPDGLVIATKGGLTRQGPDQWTAVGRAPYLRQQ
HCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHH
VELSLRRLKLERIDLYQLHRIDPRTPVEESLGELRALQQEGKIRQIGLSEVSVAELEHSR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
SLAEIVSVQNRYNLADRASEDVLDYAEREGIGFIPWFPVATGTLARPGGVLDAIAKRHGS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
QPAQLALAWLLRRSPVMLPIPGTSSTAHLEENVAAAGVSLTDSEFDELAKLVS
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
STQAASRDVTAAASGTFLLGGELPVNRLGFGAMRITGPGIWGEPADRAEAIAVLRRSVE
CCCCCCCCCEEECCCCEEECCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
LGVNFIDTADSYGPHVSEELIAEALHPYPDGLVIATKGGLTRQGPDQWTAVGRAPYLRQQ
HCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHCCCCHHHHHH
VELSLRRLKLERIDLYQLHRIDPRTPVEESLGELRALQQEGKIRQIGLSEVSVAELEHSR
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHH
SLAEIVSVQNRYNLADRASEDVLDYAEREGIGFIPWFPVATGTLARPGGVLDAIAKRHGS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
QPAQLALAWLLRRSPVMLPIPGTSSTAHLEENVAAAGVSLTDSEFDELAKLVS
CHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]