| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is proA
Identifier: 158317012
GI number: 158317012
Start: 6318619
End: 6319875
Strand: Reverse
Name: proA
Synonym: Franean1_5256
Alternate gene names: 158317012
Gene position: 6319875-6318619 (Counterclockwise)
Preceding gene: 158317013
Following gene: 158317011
Centisome position: 70.36
GC content: 73.91
Gene sequence:
>1257_bases ATGAACACCTCTGCGGAGGACGTCCGCGCCAGCGCGGTCCGAGCCCGGCAGGCCGCCGGGCAGCTCGCCCCGCTGTCGCG GGCGGCGAAGGACGCCGCGCTGCTGGGCATGGCCGCGGCGCTGCTCGACCGGTCCGCCGAGATCCTCGCCGCGAACGCCC TGGACACCGCCGCCGCGCGGGCCGCCGGCACGTCCGCCGCGCTGGTCGACCGGCTGACCCTCACCCCGGAGCGGATCGAG GCGATGGCCGACGGCCTGCGCCAGGTCGCGGCGCTCGAGGACCCGGTCGGTGAGGTCGTCCGCGGGCGGGTGCTGCCCAA CGGGCTGGAGCTGCGCCAGGTCCGGGTGCCGCTCGGCGTCATCGGGATCATCTACGAGGCCCGGCCCAACGTCACGGTGG ACGCGGCGGGCCTGTGCATCAAGAGCGGCAACGCGGTGCTGCTGCGGGGCAGCGCCTCGGCGCTGAACTCCAACCGGGTG CTGGTGGACGTCCTGCGGGAGGCGGCGGTGGCCGCGGGGCTGCCGGCCGACGGCGTGCAGCTCGTCCCGGGGGCGGACCA CGACTCGGTGAAGCACCTCATGCGGCTGCGCGGCCTGGTGGACGTCCTCATCCCGCGCGGCGGGGCCGGCCTGATCCGCG CGGTCGTCGAGGAGTCGACGGTTCCGGTCATCGAGACCGGCGTCGGTAACTGCCATGTGTACGTGGACGTCGACGCCGAC GTCGACACCGCGCTGGCCATCACGCTGAACGCGAAGACGCAGAAGGTGTCGGTGTGCAACTCGGCCGAGACCCTGCTCGT CCACGCCGGGATCGCCGCGGAGTTCCTGCCCCGGGTGCTGACGGCGCTGCGCGACGCGGGCGTGACCGTGCACGGTGACG AGACGGTGCGCGCGGTCGACCCGTCCGCCGTGCCTGTCACCGACGAGGACTGGGCGACGGAGTACCTCTCGCTCGACATG GCGGTGGGGGTCGTCGACTCGCTGGACCAGGCGCTCGACCACATCCGGCGCTGGAGCAGCGGCCACACCGAGGCGATCGT GACCCGGTCGCTGGCGGCGAGTCGCCGGTTCGTCGCCTCCTGCGACAGCGCCGCGGTGATGGTGAACGCCTCGACCCGCT TCACCGACGGCGAGCGGTTCGGGATGGGCGCCGAGATCGGCATCTCCACGCAGAAGCTGCACGCCCGCGGGCCGATGGGC CTGCCCGAGCTGACCTCGACGACCTGGGTGGGCATCGGGGACGGCCACCTGGTGTGA
Upstream 100 bases:
>100_bases CCGCCGCCGGTAGCCTCAGGGAACGGCGCACAGCGGCGCGCCGTCGACGCCGGGCCCGCGTCCGCGCCGGCCGTCGCGGA CAGTCGGGAGGAATCCGGTC
Downstream 100 bases:
>100_bases CCGGGCGGCGAGTGGGCGTTGCGGGTGGCCTTCCGGGAGGCCGGAACGGCCGTCTCGGGAGCACTCCGGAGCACTCCGGA AGCCCGTCATCCCTCGTCAA
Product: gamma-glutamyl phosphate reductase
Products: NA
Alternate protein names: GPR; Glutamate-5-semialdehyde dehydrogenase; Glutamyl-gamma-semialdehyde dehydrogenase; GSA dehydrogenase
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MNTSAEDVRASAVRARQAAGQLAPLSRAAKDAALLGMAAALLDRSAEILAANALDTAAARAAGTSAALVDRLTLTPERIE AMADGLRQVAALEDPVGEVVRGRVLPNGLELRQVRVPLGVIGIIYEARPNVTVDAAGLCIKSGNAVLLRGSASALNSNRV LVDVLREAAVAAGLPADGVQLVPGADHDSVKHLMRLRGLVDVLIPRGGAGLIRAVVEESTVPVIETGVGNCHVYVDVDAD VDTALAITLNAKTQKVSVCNSAETLLVHAGIAAEFLPRVLTALRDAGVTVHGDETVRAVDPSAVPVTDEDWATEYLSLDM AVGVVDSLDQALDHIRRWSSGHTEAIVTRSLAASRRFVASCDSAAVMVNASTRFTDGERFGMGAEIGISTQKLHARGPMG LPELTSTTWVGIGDGHLV
Sequences:
>Translated_418_residues MNTSAEDVRASAVRARQAAGQLAPLSRAAKDAALLGMAAALLDRSAEILAANALDTAAARAAGTSAALVDRLTLTPERIE AMADGLRQVAALEDPVGEVVRGRVLPNGLELRQVRVPLGVIGIIYEARPNVTVDAAGLCIKSGNAVLLRGSASALNSNRV LVDVLREAAVAAGLPADGVQLVPGADHDSVKHLMRLRGLVDVLIPRGGAGLIRAVVEESTVPVIETGVGNCHVYVDVDAD VDTALAITLNAKTQKVSVCNSAETLLVHAGIAAEFLPRVLTALRDAGVTVHGDETVRAVDPSAVPVTDEDWATEYLSLDM AVGVVDSLDQALDHIRRWSSGHTEAIVTRSLAASRRFVASCDSAAVMVNASTRFTDGERFGMGAEIGISTQKLHARGPMG LPELTSTTWVGIGDGHLV >Mature_418_residues MNTSAEDVRASAVRARQAAGQLAPLSRAAKDAALLGMAAALLDRSAEILAANALDTAAARAAGTSAALVDRLTLTPERIE AMADGLRQVAALEDPVGEVVRGRVLPNGLELRQVRVPLGVIGIIYEARPNVTVDAAGLCIKSGNAVLLRGSASALNSNRV LVDVLREAAVAAGLPADGVQLVPGADHDSVKHLMRLRGLVDVLIPRGGAGLIRAVVEESTVPVIETGVGNCHVYVDVDAD VDTALAITLNAKTQKVSVCNSAETLLVHAGIAAEFLPRVLTALRDAGVTVHGDETVRAVDPSAVPVTDEDWATEYLSLDM AVGVVDSLDQALDHIRRWSSGHTEAIVTRSLAASRRFVASCDSAAVMVNASTRFTDGERFGMGAEIGISTQKLHARGPMG LPELTSTTWVGIGDGHLV
Specific function: Catalyzes the NADPH dependent reduction of L-gamma- glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate
COG id: COG0014
COG function: function code E; Gamma-glutamyl phosphate reductase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyl phosphate reductase family
Homologues:
Organism=Homo sapiens, GI21361368, Length=410, Percent_Identity=38.0487804878049, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI62912457, Length=410, Percent_Identity=38.0487804878049, Blast_Score=257, Evalue=2e-68, Organism=Escherichia coli, GI1786438, Length=406, Percent_Identity=50.2463054187192, Blast_Score=389, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17569967, Length=411, Percent_Identity=39.9026763990268, Blast_Score=285, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17569969, Length=411, Percent_Identity=39.9026763990268, Blast_Score=285, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6324899, Length=428, Percent_Identity=36.9158878504673, Blast_Score=261, Evalue=1e-70, Organism=Drosophila melanogaster, GI21357643, Length=414, Percent_Identity=37.9227053140097, Blast_Score=268, Evalue=4e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROA_FRASN (A8L1V4)
Other databases:
- EMBL: CP000820 - RefSeq: YP_001509520.1 - ProteinModelPortal: A8L1V4 - SMR: A8L1V4 - GeneID: 5673590 - GenomeReviews: CP000820_GR - KEGG: fre:Franean1_5256 - HOGENOM: HBG318080 - OMA: QYPAACN - ProtClustDB: PRK00197 - BioCyc: FSP1855:FRANEAN1_5256-MONOMER - GO: GO:0005737 - HAMAP: MF_00412 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR000965 - InterPro: IPR020593 - InterPro: IPR012134 - Gene3D: G3DSA:3.40.309.10 - Gene3D: G3DSA:3.40.605.10 - PANTHER: PTHR11063:SF1 - PIRSF: PIRSF000151 - TIGRFAMs: TIGR00407
Pfam domain/function: PF00171 Aldedh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.2.1.41
Molecular weight: Translated: 43440; Mature: 43440
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS01223 PROA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSAEDVRASAVRARQAAGQLAPLSRAAKDAALLGMAAALLDRSAEILAANALDTAAAR CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH AAGTSAALVDRLTLTPERIEAMADGLRQVAALEDPVGEVVRGRVLPNGLELRQVRVPLGV HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCEE IGIIYEARPNVTVDAAGLCIKSGNAVLLRGSASALNSNRVLVDVLREAAVAAGLPADGVQ EEEEEECCCCEEEEECCEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCEE LVPGADHDSVKHLMRLRGLVDVLIPRGGAGLIRAVVEESTVPVIETGVGNCHVYVDVDAD ECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEEECCC VDTALAITLNAKTQKVSVCNSAETLLVHAGIAAEFLPRVLTALRDAGVTVHGDETVRAVD CCEEEEEEEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCCEEEEEC PSAVPVTDEDWATEYLSLDMAVGVVDSLDQALDHIRRWSSGHTEAIVTRSLAASRRFVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC CDSAAVMVNASTRFTDGERFGMGAEIGISTQKLHARGPMGLPELTSTTWVGIGDGHLV CCCCEEEEECCCCCCCCHHCCCCCEECCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure MNTSAEDVRASAVRARQAAGQLAPLSRAAKDAALLGMAAALLDRSAEILAANALDTAAAR CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH AAGTSAALVDRLTLTPERIEAMADGLRQVAALEDPVGEVVRGRVLPNGLELRQVRVPLGV HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEECCCEE IGIIYEARPNVTVDAAGLCIKSGNAVLLRGSASALNSNRVLVDVLREAAVAAGLPADGVQ EEEEEECCCCEEEEECCEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHHHCCCCCCCEE LVPGADHDSVKHLMRLRGLVDVLIPRGGAGLIRAVVEESTVPVIETGVGNCHVYVDVDAD ECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEECCCCEEEEEEECCC VDTALAITLNAKTQKVSVCNSAETLLVHAGIAAEFLPRVLTALRDAGVTVHGDETVRAVD CCEEEEEEEECCCEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEECCCEEEEEC PSAVPVTDEDWATEYLSLDMAVGVVDSLDQALDHIRRWSSGHTEAIVTRSLAASRRFVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC CDSAAVMVNASTRFTDGERFGMGAEIGISTQKLHARGPMGLPELTSTTWVGIGDGHLV CCCCEEEEECCCCCCCCHHCCCCCEECCCHHHHCCCCCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA