| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317011
Identifier: 158317011
GI number: 158317011
Start: 6317534
End: 6318442
Strand: Reverse
Name: 158317011
Synonym: Franean1_5255
Alternate gene names: NA
Gene position: 6318442-6317534 (Counterclockwise)
Preceding gene: 158317012
Following gene: 158317010
Centisome position: 70.35
GC content: 70.19
Gene sequence:
>909_bases TTGCAGGGATACGCGTTCGCAGACGTCGCTGATGTCCGGGAGCGGCTCCGGGAGACGGGCTACCTCGCCGACGAGGCGAT CGCCACCACGGTCTTCCTCGCCGACCGGCTGGGCAAGCCGCTGCTCGTCGAGGGGCCGGCCGGTGTCGGCAAGACCGAGC TCGCCAAGTCGCTGGCCGCGGCGGTCGGCGCCGAGCTGATCAGGCTCCAGTGCTACGAGGGCCTGGACGAGGCCCGCGCG CTCTACGAGTGGAACTACAAGAAGCAGCTGCTGCGCATCCAGGCGGCCTCCGGCGCCACGGCCGAGGCCGCCGGGGACGC CGCCGCTGGCACCGCCAGCTGGCAGCAGACCCACGACGACATCTTCAGCGAGGAGTTCCTCCTCTCCCGTCCGCTGCTCA CCGCGATCCGGCGGGACGACCCGACCGTCCTGCTCATCGACGAGACGGACAAGGCCGACGTCGAGGTGGAGGGCCTGCTG CTGGAGGTGCTCTCCGACTTCCAGGTCACGATCCCCGAGCTGGGCACCGTGAAGGCGACCCGCCGGCCGTTCGTCATCCT CACCTCGAACGCCACCCGCGAGCTGTCGGAGGCGCTCAAGCGCCGCTGCCTGTACCTGAACCTGGACTACCCCTCGGCAG CCCGGGAGAAGGAGATCGTCCTCGCCCGGGTGCCCGAGCTGCCGGAGAAGATGGCCGAGTCGCTGGTGCGGATCGTGCGC GCGCTGCGGGCGATGGAGCTCAAGAAGGCCCCGTCGATCGCGGAGACGATCGACTGGGGCCAGACCGTTCTCGCGCTCGG TTTCGACACCATGGACGACGCCGCCGTCACCTCCACCCTCGGCGTGGTCCTCAAGCACGCCAGCGACCAGGCCCGCGCCA TCAGCCAGCTCAAGCTCGGCGCCAACTGA
Upstream 100 bases:
>100_bases CGGAAGCCCGTCATCCCTCGTCAATCCGTCATGTGCTGCCAACCACTGGCACTATGGACCGTGGTGGTGCTAGGCGCTGG ACCGGAAGGTGGCCATGTCG
Downstream 100 bases:
>100_bases CGCAGGACCGGGAGGTCCCGATGAACCTGCTCGACCGCACCGTCGAGTTCACCGCCGCGCTGCGCCGCGCCAACGTCCCG GTGAGCAGCGCCGAGACGGT
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA_5 ATPase; AAA Family ATPase; ATPase AAA Family Protein; AAA ATPase; ATPase Associated With Various Cellular Activities; ATPase Central Domain-Containing Protein; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MQGYAFADVADVRERLRETGYLADEAIATTVFLADRLGKPLLVEGPAGVGKTELAKSLAAAVGAELIRLQCYEGLDEARA LYEWNYKKQLLRIQAASGATAEAAGDAAAGTASWQQTHDDIFSEEFLLSRPLLTAIRRDDPTVLLIDETDKADVEVEGLL LEVLSDFQVTIPELGTVKATRRPFVILTSNATRELSEALKRRCLYLNLDYPSAAREKEIVLARVPELPEKMAESLVRIVR ALRAMELKKAPSIAETIDWGQTVLALGFDTMDDAAVTSTLGVVLKHASDQARAISQLKLGAN
Sequences:
>Translated_302_residues MQGYAFADVADVRERLRETGYLADEAIATTVFLADRLGKPLLVEGPAGVGKTELAKSLAAAVGAELIRLQCYEGLDEARA LYEWNYKKQLLRIQAASGATAEAAGDAAAGTASWQQTHDDIFSEEFLLSRPLLTAIRRDDPTVLLIDETDKADVEVEGLL LEVLSDFQVTIPELGTVKATRRPFVILTSNATRELSEALKRRCLYLNLDYPSAAREKEIVLARVPELPEKMAESLVRIVR ALRAMELKKAPSIAETIDWGQTVLALGFDTMDDAAVTSTLGVVLKHASDQARAISQLKLGAN >Mature_302_residues MQGYAFADVADVRERLRETGYLADEAIATTVFLADRLGKPLLVEGPAGVGKTELAKSLAAAVGAELIRLQCYEGLDEARA LYEWNYKKQLLRIQAASGATAEAAGDAAAGTASWQQTHDDIFSEEFLLSRPLLTAIRRDDPTVLLIDETDKADVEVEGLL LEVLSDFQVTIPELGTVKATRRPFVILTSNATRELSEALKRRCLYLNLDYPSAAREKEIVLARVPELPEKMAESLVRIVR ALRAMELKKAPSIAETIDWGQTVLALGFDTMDDAAVTSTLGVVLKHASDQARAISQLKLGAN
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32912; Mature: 32912
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGYAFADVADVRERLRETGYLADEAIATTVFLADRLGKPLLVEGPAGVGKTELAKSLAA CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH AVGAELIRLQCYEGLDEARALYEWNYKKQLLRIQAASGATAEAAGDAAAGTASWQQTHDD HHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHEEECCCCCCCHHCCCCCCCCCHHHHHHHH IFSEEFLLSRPLLTAIRRDDPTVLLIDETDKADVEVEGLLLEVLSDFQVTIPELGTVKAT HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEC RRPFVILTSNATRELSEALKRRCLYLNLDYPSAAREKEIVLARVPELPEKMAESLVRIVR CCCEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH ALRAMELKKAPSIAETIDWGQTVLALGFDTMDDAAVTSTLGVVLKHASDQARAISQLKLG HHHHHHHHCCCCHHHHHHHCHHEEHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC AN CC >Mature Secondary Structure MQGYAFADVADVRERLRETGYLADEAIATTVFLADRLGKPLLVEGPAGVGKTELAKSLAA CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH AVGAELIRLQCYEGLDEARALYEWNYKKQLLRIQAASGATAEAAGDAAAGTASWQQTHDD HHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHEEECCCCCCCHHCCCCCCCCCHHHHHHHH IFSEEFLLSRPLLTAIRRDDPTVLLIDETDKADVEVEGLLLEVLSDFQVTIPELGTVKAT HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEC RRPFVILTSNATRELSEALKRRCLYLNLDYPSAAREKEIVLARVPELPEKMAESLVRIVR CCCEEEEECCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHH ALRAMELKKAPSIAETIDWGQTVLALGFDTMDDAAVTSTLGVVLKHASDQARAISQLKLG HHHHHHHHCCCCHHHHHHHCHHEEHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCC AN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA