| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is proB [H]
Identifier: 158317013
GI number: 158317013
Start: 6319977
End: 6321092
Strand: Reverse
Name: proB [H]
Synonym: Franean1_5257
Alternate gene names: 158317013
Gene position: 6321092-6319977 (Counterclockwise)
Preceding gene: 158317014
Following gene: 158317012
Centisome position: 70.37
GC content: 75.27
Gene sequence:
>1116_bases GTGGTCCGTTCCTTCGTCACCGAAGCGAACCGGGTCGTCGTCAAGGTCGGCTCGTCGTCGCTGACCACGGCGGCCGGTGG GCTGGACGCCGACCGGGTCGAGGCGCTGGTCGCGGCCGTCGCCGGCCGGGCCGGCAGCCTGGTGCTGGTGTCGTCGGGCG CGATCGCCGCCGGTCTCGCCCCGCTCGGGCTGACCAGGCGGCCGCGTGACCTGGCCACCCTGCAGGCGGCGGCGAGCGTC GGCCAGAGCTCGCTCGTCCACTGCTACGCCGGCGCGTTCGGCCGGGCCGGGCACCGGGTCGGCCAGGTCCTGCTCACCGC CACCGACGTGATCCGGCGGACGCACTACCGGAACGCGCGCACGACCCTGGAGCGGCTGCTGGCCCTCGGTGTCGTGCCGA TCGTGAACGAGAACGACGCGGTCGCCACCCAGGAGATCCGGTTCGGTGACAACGACCGGCTCGCCGCGATCGTCTCCCAC CTGGTCTCCGCAGACCTGCTCGTCCTGCTCTCCGACGTCGACGGCGTGTACGAGTCGAACCCGCGGCTGGGGCCGGCGAG CATGGTGCGCGAGGTCCGCTCGGACGCCGATCTCGACGGCCTGACCGCCCGCGGCACCGGCGCGGCCGGCGTCGGGGTCG GCGGCATGGCGACGAAGATCGACGCCGCGCGGATGGCGGCGTCCGGTGGCGTCACGACGGTCGTCACCTCTGCGGCCAAC GCGGCCGCGGTGCTGGCCGGCGAGGAGATCGGGACGGTGTTCCACCCGACCGGCCCGCGCCGGCCGTCCCGCCTGCTCTG GCTGGCCCACGCCACCGCTCCCGAGGGCCGGCTGCACCTGGACGAGGGCGCGGTCGCCGCGGTGGTGGACCGGCGGGCCT CGCTGCTGCCGGCCGGGGTCACCAAGGTCGAGGGGGACTTCTCCGCCGGAGACCCGGTCGACCTGGTCGACCCGCGGGGC CGTCCGGTGGCGCGCGGGCTGGTCGAGTTCGACTCCGTCGAGCTGCCGGGCATGCTCGGCCGCTCGACGATGGACCTGGC GGCCGAGCGGGGCCCGTCCTACGAGCGTGAGGTCGTCCACCGCGACGACCTCGTCCTGCTCCTCACCCGTCGCTGA
Upstream 100 bases:
>100_bases CGCTGACGACTTCGACGACGGTGCCGGCTTCAGCGACAGTGCGGCCTTCGGCGACAGCGGTGGCTCCGGCGGTGACGCCG ACGGCGGGCGTGGCTAGGCC
Downstream 100 bases:
>100_bases CCCGCCGCCGGTAGCCTCAGGGAACGGCGCACAGCGGCGCGCCGTCGACGCCGGGCCCGCGTCCGCGCCGGCCGTCGCGG ACAGTCGGGAGGAATCCGGT
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MVRSFVTEANRVVVKVGSSSLTTAAGGLDADRVEALVAAVAGRAGSLVLVSSGAIAAGLAPLGLTRRPRDLATLQAAASV GQSSLVHCYAGAFGRAGHRVGQVLLTATDVIRRTHYRNARTTLERLLALGVVPIVNENDAVATQEIRFGDNDRLAAIVSH LVSADLLVLLSDVDGVYESNPRLGPASMVREVRSDADLDGLTARGTGAAGVGVGGMATKIDAARMAASGGVTTVVTSAAN AAAVLAGEEIGTVFHPTGPRRPSRLLWLAHATAPEGRLHLDEGAVAAVVDRRASLLPAGVTKVEGDFSAGDPVDLVDPRG RPVARGLVEFDSVELPGMLGRSTMDLAAERGPSYEREVVHRDDLVLLLTRR
Sequences:
>Translated_371_residues MVRSFVTEANRVVVKVGSSSLTTAAGGLDADRVEALVAAVAGRAGSLVLVSSGAIAAGLAPLGLTRRPRDLATLQAAASV GQSSLVHCYAGAFGRAGHRVGQVLLTATDVIRRTHYRNARTTLERLLALGVVPIVNENDAVATQEIRFGDNDRLAAIVSH LVSADLLVLLSDVDGVYESNPRLGPASMVREVRSDADLDGLTARGTGAAGVGVGGMATKIDAARMAASGGVTTVVTSAAN AAAVLAGEEIGTVFHPTGPRRPSRLLWLAHATAPEGRLHLDEGAVAAVVDRRASLLPAGVTKVEGDFSAGDPVDLVDPRG RPVARGLVEFDSVELPGMLGRSTMDLAAERGPSYEREVVHRDDLVLLLTRR >Mature_371_residues MVRSFVTEANRVVVKVGSSSLTTAAGGLDADRVEALVAAVAGRAGSLVLVSSGAIAAGLAPLGLTRRPRDLATLQAAASV GQSSLVHCYAGAFGRAGHRVGQVLLTATDVIRRTHYRNARTTLERLLALGVVPIVNENDAVATQEIRFGDNDRLAAIVSH LVSADLLVLLSDVDGVYESNPRLGPASMVREVRSDADLDGLTARGTGAAGVGVGGMATKIDAARMAASGGVTTVVTSAAN AAAVLAGEEIGTVFHPTGPRRPSRLLWLAHATAPEGRLHLDEGAVAAVVDRRASLLPAGVTKVEGDFSAGDPVDLVDPRG RPVARGLVEFDSVELPGMLGRSTMDLAAERGPSYEREVVHRDDLVLLLTRR
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline [H]
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
Organism=Homo sapiens, GI21361368, Length=302, Percent_Identity=30.4635761589404, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI62912457, Length=300, Percent_Identity=30.6666666666667, Blast_Score=104, Evalue=1e-22, Organism=Escherichia coli, GI1786437, Length=367, Percent_Identity=37.6021798365123, Blast_Score=221, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17569969, Length=343, Percent_Identity=32.9446064139942, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17569967, Length=343, Percent_Identity=32.9446064139942, Blast_Score=120, Evalue=9e-28, Organism=Saccharomyces cerevisiae, GI6320506, Length=419, Percent_Identity=31.5035799522673, Blast_Score=195, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6321822, Length=423, Percent_Identity=30.9692671394799, Blast_Score=180, Evalue=3e-46, Organism=Drosophila melanogaster, GI21357643, Length=292, Percent_Identity=34.5890410958904, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 [H]
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA [H]
EC number: =2.7.2.11 [H]
Molecular weight: Translated: 38398; Mature: 38398
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS50890 PUA ; PS00902 GLUTAMATE_5_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSFVTEANRVVVKVGSSSLTTAAGGLDADRVEALVAAVAGRAGSLVLVSSGAIAAGLA CCCHHHCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCC PLGLTRRPRDLATLQAAASVGQSSLVHCYAGAFGRAGHRVGQVLLTATDVIRRTHYRNAR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH TTLERLLALGVVPIVNENDAVATQEIRFGDNDRLAAIVSHLVSADLLVLLSDVDGVYESN HHHHHHHHHCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCC PRLGPASMVREVRSDADLDGLTARGTGAAGVGVGGMATKIDAARMAASGGVTTVVTSAAN CCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC AAAVLAGEEIGTVFHPTGPRRPSRLLWLAHATAPEGRLHLDEGAVAAVVDRRASLLPAGV CEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC TKVEGDFSAGDPVDLVDPRGRPVARGLVEFDSVELPGMLGRSTMDLAAERGPSYEREVVH EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHC RDDLVLLLTRR CCCEEEEEECC >Mature Secondary Structure MVRSFVTEANRVVVKVGSSSLTTAAGGLDADRVEALVAAVAGRAGSLVLVSSGAIAAGLA CCCHHHCCCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHCCC PLGLTRRPRDLATLQAAASVGQSSLVHCYAGAFGRAGHRVGQVLLTATDVIRRTHYRNAR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHH TTLERLLALGVVPIVNENDAVATQEIRFGDNDRLAAIVSHLVSADLLVLLSDVDGVYESN HHHHHHHHHCCEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCC PRLGPASMVREVRSDADLDGLTARGTGAAGVGVGGMATKIDAARMAASGGVTTVVTSAAN CCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC AAAVLAGEEIGTVFHPTGPRRPSRLLWLAHATAPEGRLHLDEGAVAAVVDRRASLLPAGV CEEEEECCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC TKVEGDFSAGDPVDLVDPRGRPVARGLVEFDSVELPGMLGRSTMDLAAERGPSYEREVVH EEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHC RDDLVLLLTRR CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA