Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316671

Identifier: 158316671

GI number: 158316671

Start: 5893661

End: 5894146

Strand: Reverse

Name: 158316671

Synonym: Franean1_4908

Alternate gene names: NA

Gene position: 5894146-5893661 (Counterclockwise)

Preceding gene: 158316672

Following gene: 158316666

Centisome position: 65.62

GC content: 74.28

Gene sequence:

>486_bases
ATGAGCGGTGTGGAGCTGCTCGCCGTGGCGCTGGTGATGGCGGTCGGTGTCGTCGGTGTGGTCGTGCCGGTGATGCCCGG
CCTGCTCCTCGTCTGGGGCGCCGGCGTGTGGTGGACGATCGCGGACGGCGGCGGCGCGGGCCGCTGGGCGGTGCTCGCGG
TCATGAGCGCACTGTTCGTCGCCGGCGCGCTGGCCAAGTACGTGCTGCCGGGCCGGGCCGCGTCGGCCGCTGGCGCGCCG
TTCTCGACGATGCTCATCGGCGCGGTCTGCGCCGTCATCGGCTTCTTCGTGGTGCCGGTTCTCGGCCTGCTCGTCGGCGG
GCTCGCGGGCATCTACCTCGCGGAGCTCACCCGCCTGCGCGACGCCCGGCGAGCCACCGCCTCGACCTGGGTCGCTGTCG
TCGCCTTCGGTGTCGGGCTGCTCGTCGAGCTCGGTGCGGCCGTCGCGATGGCCGCGACCTGGGGCGTCGGCGAGCTCGTC
AGCTGA

Upstream 100 bases:

>100_bases
CACCGGCGGGGCGGGTATTTTCGGGCGGAGCACGCCAGCCGCGCAAGCCGGGCATCATGCCGCCGGGCATCAGGATGTCG
GGTACCGGGAGGTCGTCGCC

Downstream 100 bases:

>100_bases
ACCCGTAGTCATCCGGGCCGGGTGCGCGGCGTGGGGAAGCCCGGCTCCGGAGGAAAGGGAAGTGCGCCGGGGAACTGTGG
TCGCGATGGCGGAAAGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAP
FSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELV
S

Sequences:

>Translated_161_residues
MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAP
FSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELV
S
>Mature_160_residues
SGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFVAGALAKYVLPGRAASAAGAPF
STMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLRDARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16003; Mature: 15872

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
AGALAKYVLPGRAASAAGAPFSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
SGVELLAVALVMAVGVVGVVVPVMPGLLLVWGAGVWWTIADGGGAGRWAVLAVMSALFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
AGALAKYVLPGRAASAAGAPFSTMLIGAVCAVIGFFVVPVLGLLVGGLAGIYLAELTRLR
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DARRATASTWVAVVAFGVGLLVELGAAVAMAATWGVGELVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA