Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is yhbW [C]

Identifier: 158316591

GI number: 158316591

Start: 5766605

End: 5767663

Strand: Reverse

Name: yhbW [C]

Synonym: Franean1_4827

Alternate gene names: 158316591

Gene position: 5767663-5766605 (Counterclockwise)

Preceding gene: 158316592

Following gene: 158316590

Centisome position: 64.21

GC content: 71.67

Gene sequence:

>1059_bases
GTGAAGTTCATCGGCCTGTCGGCACTCGCGCACTCGCCGGACCTGGAGACCGGCCGGTTGCCGTCGGAAACCGAGGTCGT
GCGCCGCGCGGTCGAGACGGCTGTCCTGTTCGAGGAGCTGGGATTCGACGGCTTCGGGTTCGGTGAGCGTCACCACCCGC
CGTTCCTGTCGACGTCCCCGACCGTCCTGCTGGGCCACATCGCCGCGCTGACGTCCCGGATCCGCCTGTTCACCGGCGTC
ACGCTGCTGTCGGTGCTCGACCCGGTCCGCGTCGCGGAGGACTACGCGACCATCGACCACCTCTCCGGCGGCCGGGTCGA
GTTGATCATCGGCAAGGGTTCCGGCCCCAAGCAGGCGGAGCTGTTCGGGCTGACCCGCGACCAGCAGCGCGACGCCCTCA
ACGAGAAGTTCCGCCTCCTGCACCGGTTGTGGACCGAGCGTGACGTGAGCTGGCGCGGCACCACCCGCCCGCCACTGGAC
CGGGTGACCACGCTGCCCCGGCCGGTGCCCCGCCCCGGCGGTGCCCGGCCGCGCATCTGGCACGGCGGTGGCACGTCCCC
CGACTCGGTCGACCTCGCCGCAGAGTTCGGCGATCCGGTGATGTTCTCCAACGCGTCCGCGCCGACGGAGAAGTACACCT
GGCTGTCCGATCACTACACGCAGCGCTGGGAGGCCTACGGCCGCGACCCGGCCGCGCTCTACACCGGCGCGGGGACGACC
GCCTACTACAGCGCGCCCACCTCCCAGCAGGCGCTGGCCGACTTCCGGCCGATCTTCGAGGCGCGGCTGCGGGCCCAGAG
CGGCATCGGCATGCCGCCGGACTTCCCGACCCTGGAGGACTTCGTCGAGAGCAGCTCGGCCCTCATCGGCAGCCCCGCGC
AGGTCATCGAGAAGGTCGAGCGCGACGCGAGCCTGCTCGGGAACAGCGCGCTGATCTTCAGCGTGGAGGCCGAGGGGCTC
AGCCACGACCAGCGCCGGGCCAGTTTCGAGCTGTTCGCCACCGACATCGCGCCCACGCTGCGGACCTCCGTCCCCGACCC
GCCGTGGCCCGCCCAGTGA

Upstream 100 bases:

>100_bases
CCCCGCATCGCCCGGGACGGGAGCGCGGCCCGCCGCGCTCCGGAGGCGGTCGCGGTCGGTCCGGCCCCGTCCGTAACGTG
ATCCCCGGAGGTCTCCGAAG

Downstream 100 bases:

>100_bases
CCGCGGGCCCGCGGTGACCTCCGCCCCGCGGACTCCGCGGATCCCGACTGCGCGGGCCCTGAAGGCCCCGCGGGGCGGCG
CGGTCGGGGGATACCGCGTC

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV
TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD
RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT
AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL
SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ

Sequences:

>Translated_352_residues
MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV
TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD
RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT
AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL
SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ
>Mature_352_residues
MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSPTVLLGHIAALTSRIRLFTGV
TLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAELFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLD
RVTTLPRPVPRPGGARPRIWHGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT
AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVERDASLLGNSALIFSVEAEGL
SHDQRRASFELFATDIAPTLRTSVPDPPWPAQ

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=342, Percent_Identity=26.6081871345029, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 38560; Mature: 38560

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00933 FGGY_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSP
CCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TVLLGHIAALTSRIRLFTGVTLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHH
LFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLDRVTTLPRPVPRPGGARPRIW
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE
HGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT
CCCCCCCCCEEHHHHCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCE
AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVE
EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHH
RDASLLGNSALIFSVEAEGLSHDQRRASFELFATDIAPTLRTSVPDPPWPAQ
HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKFIGLSALAHSPDLETGRLPSETEVVRRAVETAVLFEELGFDGFGFGERHHPPFLSTSP
CCEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TVLLGHIAALTSRIRLFTGVTLLSVLDPVRVAEDYATIDHLSGGRVELIIGKGSGPKQAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHH
LFGLTRDQQRDALNEKFRLLHRLWTERDVSWRGTTRPPLDRVTTLPRPVPRPGGARPRIW
HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEE
HGGGTSPDSVDLAAEFGDPVMFSNASAPTEKYTWLSDHYTQRWEAYGRDPAALYTGAGTT
CCCCCCCCCEEHHHHCCCCEEECCCCCCCHHCCCHHHHHHHHHHHHCCCCCEEEECCCCE
AYYSAPTSQQALADFRPIFEARLRAQSGIGMPPDFPTLEDFVESSSALIGSPAQVIEKVE
EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHCCCHHHHHHHHH
RDASLLGNSALIFSVEAEGLSHDQRRASFELFATDIAPTLRTSVPDPPWPAQ
HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]