Click here to switch to the map view.

The map label for this gene is gsiC [H]

Identifier: 158316592

GI number: 158316592

Start: 5767683

End: 5768669

Strand: Reverse

Name: gsiC [H]

Synonym: Franean1_4828

Alternate gene names: 158316592

Gene position: 5768669-5767683 (Counterclockwise)

Preceding gene: 158316593

Following gene: 158316591

Centisome position: 64.22

GC content: 72.95

Gene sequence:

>987_bases
ATGACGCGCTATCTGTTCGGGCGGTTCCTGCAGGGGGCCTTCGTTCTCTGGGCCGCGTTCACGCTCTCGTTCGTCGTGCT
GTACGCGCTGCCGAGCGATCCGGCGGCGATCATGATCGGGCCGAGTAACTCCCTCACCCCGGCCGAGCTCGCGGCCCGCC
GGCACGAGCTCGGCCTGGACCGGTCCCTGTTCGCGCAGTACTTCGGGCGGCTGGGCGACCTCCTCCACGGCGACCTGGGC
CGGTCGGTGCAGTCCGGTCAGCCGGTGCGGGAGCTGATCGGGGACGCCCTGCCGCAGACCGCCGCCATCACGGGGCTCGG
CCTGGTGGTCGGGGTGGCGCTCGGCGTGGGTCTCGCGGTCGCGGCGACGCTGACCCACCGGCGCTGGCTGCGCCAGACGC
TGCTCACCCTCCCCCCACTCGGCGTGGCCGTCCCGAGCTTCCTCGTCGGGCTCCTGCTGCTGCAGTGGTTCTCGTTTCGG
TGGCAGCTGTTCCCGGCCATCGGCAACAGCGGCTGGCGCAGCCTGGTGCTCCCCGCCGTCACGATCTCGCTGCAGCCCGC
CGCCCTGATCGCGCAGCTGCTGGCGCGGAGCCTGGACAACGAGCTGCGGCAGAACTACGTCGACCTGGCCAGGGCGAAGG
GCGCCGGACCGGCGCGGGTGAACGTCCGGCACGCGCTGCGCAACGCCGCGCTGCCGGCGCTGACCATCGCCGGCATCCTG
GTCGGCGGACTGCTGGCCGGCGCGATCGTGGTGGAGGTCGTGTTCTCCCGCAACGGCCTCGGCCGGATCTCCCAGGCCGC
GGTCGACAGCCAGGATCTGCCGGTGGTGCAGGGCGTGGTCCTGCTCGGCTCGGCGGTCTTCGTCGCCGTCAACCTTCTCG
TCGATCTGCTCTATCCGCTGCTCGACCCCCGCATCGCCCGGGACGGGAGCGCGGCCCGCCGCGCTCCGGAGGCGGTCGCG
GTCGGTCCGGCCCCGTCCGTAACGTGA

Upstream 100 bases:

>100_bases
CCGAAGAACCCGCCGCCGCGCCCCCGCCCGCAGCAGTAGGGTCGGCACCGGTAACGGGTGTGAACGGAGCGGGAACACAC
TTCCGGAGAATGGTCCCGAG

Downstream 100 bases:

>100_bases
TCCCCGGAGGTCTCCGAAGGTGAAGTTCATCGGCCTGTCGGCACTCGCGCACTCGCCGGACCTGGAGACCGGCCGGTTGC
CGTCGGAAACCGAGGTCGTG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTRYLFGRFLQGAFVLWAAFTLSFVVLYALPSDPAAIMIGPSNSLTPAELAARRHELGLDRSLFAQYFGRLGDLLHGDLG
RSVQSGQPVRELIGDALPQTAAITGLGLVVGVALGVGLAVAATLTHRRWLRQTLLTLPPLGVAVPSFLVGLLLLQWFSFR
WQLFPAIGNSGWRSLVLPAVTISLQPAALIAQLLARSLDNELRQNYVDLARAKGAGPARVNVRHALRNAALPALTIAGIL
VGGLLAGAIVVEVVFSRNGLGRISQAAVDSQDLPVVQGVVLLGSAVFVAVNLLVDLLYPLLDPRIARDGSAARRAPEAVA
VGPAPSVT

Sequences:

>Translated_328_residues
MTRYLFGRFLQGAFVLWAAFTLSFVVLYALPSDPAAIMIGPSNSLTPAELAARRHELGLDRSLFAQYFGRLGDLLHGDLG
RSVQSGQPVRELIGDALPQTAAITGLGLVVGVALGVGLAVAATLTHRRWLRQTLLTLPPLGVAVPSFLVGLLLLQWFSFR
WQLFPAIGNSGWRSLVLPAVTISLQPAALIAQLLARSLDNELRQNYVDLARAKGAGPARVNVRHALRNAALPALTIAGIL
VGGLLAGAIVVEVVFSRNGLGRISQAAVDSQDLPVVQGVVLLGSAVFVAVNLLVDLLYPLLDPRIARDGSAARRAPEAVA
VGPAPSVT
>Mature_327_residues
TRYLFGRFLQGAFVLWAAFTLSFVVLYALPSDPAAIMIGPSNSLTPAELAARRHELGLDRSLFAQYFGRLGDLLHGDLGR
SVQSGQPVRELIGDALPQTAAITGLGLVVGVALGVGLAVAATLTHRRWLRQTLLTLPPLGVAVPSFLVGLLLLQWFSFRW
QLFPAIGNSGWRSLVLPAVTISLQPAALIAQLLARSLDNELRQNYVDLARAKGAGPARVNVRHALRNAALPALTIAGILV
GGLLAGAIVVEVVFSRNGLGRISQAAVDSQDLPVVQGVVLLGSAVFVAVNLLVDLLYPLLDPRIARDGSAARRAPEAVAV
GPAPSVT

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=34.7540983606557, Blast_Score=181, Evalue=8e-47,
Organism=Escherichia coli, GI1789888, Length=312, Percent_Identity=37.1794871794872, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789965, Length=318, Percent_Identity=34.9056603773585, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=29.8701298701299, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1787761, Length=317, Percent_Identity=29.6529968454259, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1788504, Length=290, Percent_Identity=29.6551724137931, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1787550, Length=283, Percent_Identity=26.1484098939929, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34624; Mature: 34493

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRYLFGRFLQGAFVLWAAFTLSFVVLYALPSDPAAIMIGPSNSLTPAELAARRHELGLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
RSLFAQYFGRLGDLLHGDLGRSVQSGQPVRELIGDALPQTAAITGLGLVVGVALGVGLAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AATLTHRRWLRQTLLTLPPLGVAVPSFLVGLLLLQWFSFRWQLFPAIGNSGWRSLVLPAV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TISLQPAALIAQLLARSLDNELRQNYVDLARAKGAGPARVNVRHALRNAALPALTIAGIL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHH
VGGLLAGAIVVEVVFSRNGLGRISQAAVDSQDLPVVQGVVLLGSAVFVAVNLLVDLLYPL
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIARDGSAARRAPEAVAVGPAPSVT
HCCHHCCCCCHHHCCCCCEEECCCCCCC
>Mature Secondary Structure 
TRYLFGRFLQGAFVLWAAFTLSFVVLYALPSDPAAIMIGPSNSLTPAELAARRHELGLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCC
RSLFAQYFGRLGDLLHGDLGRSVQSGQPVRELIGDALPQTAAITGLGLVVGVALGVGLAV
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AATLTHRRWLRQTLLTLPPLGVAVPSFLVGLLLLQWFSFRWQLFPAIGNSGWRSLVLPAV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
TISLQPAALIAQLLARSLDNELRQNYVDLARAKGAGPARVNVRHALRNAALPALTIAGIL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHH
VGGLLAGAIVVEVVFSRNGLGRISQAAVDSQDLPVVQGVVLLGSAVFVAVNLLVDLLYPL
HHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIARDGSAARRAPEAVAVGPAPSVT
HCCHHCCCCCHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA