| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316561
Identifier: 158316561
GI number: 158316561
Start: 5728463
End: 5729053
Strand: Reverse
Name: 158316561
Synonym: Franean1_4797
Alternate gene names: NA
Gene position: 5729053-5728463 (Counterclockwise)
Preceding gene: 158316569
Following gene: 158316559
Centisome position: 63.78
GC content: 68.36
Gene sequence:
>591_bases GTGCCAGCTGGCGACGGAGGTTTCGTCGTTCGCGACACCCGCATCGCGTACGAGAACCCGTGGATGCGGGTCCGGGAGGA TGTCCTCGTTCGGGCGGACGGCAGCCCCGGCCTTTTCGGTGTGGTCGAGAAGCCGGACTTCGCCCTGATCATCCCCGTCG ACACCAATGGCGTGTGGCTGGTAGAGCAGTTTCGCCACCCGGTCGACGGCCGCTACTGGGAGTTCCCGCAGGGGTCCTGG GAGGACCAGCCGGAAGTCGGGCCCGCGGAACTGGCCGAGGCCGAACTACGGGAGGAGACCGGGCTCCGGGCCGGCCGGCT CGACCATCTGGGTCAGATCTTCACCGCCTACGGCTACGCCGACCAGGCGTGTCAGGTCTGGCTGGCGACCGAGCTCTCTC TCGGCCGGCGCGAGCTCTCCGTGGAGGAGCAGGATCTCGTGACACGTCGCTTCAACCACCGTGAGTGGGGCGACATGCTC TCCGGAGGAGTCATCAAGGACGCCTCGTCCCTGGCGGCCTGGGCGTTGCTGTGCGCGAGCCCGCTGCGGGAGCGGGCATT CGGACGAGCGGTCAGGTTTCCAGGGTCGTGA
Upstream 100 bases:
>100_bases CGCCAGGCCCGCGATCCGCGACCCTACCCGCCTACCCTGGGAACACGGCGCCGAACTCGTCGGCCTGCCGGGTAGCCATC CGCACCGAAGCGAGGAGACC
Downstream 100 bases:
>100_bases AGCGGACGGGTTCGCGCAGGACGGTTGTGGCGGCGGGGAGGTCGGCGAGGCGGGATTTCAGGTCCGCGGTCGCGGCCTTC CACCTGGCCGGGGTCAGGTC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; Nudix Hydrolase; Hydrolase NUDIX Family; Nudix Hydroxylase; Hydrolase MutT; Pyrophosphohydrolase Related Protein; Hydrolase; Hydrolase NUDIX Family Domain Protein; NUDIX Family Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPAGDGGFVVRDTRIAYENPWMRVREDVLVRADGSPGLFGVVEKPDFALIIPVDTNGVWLVEQFRHPVDGRYWEFPQGSW EDQPEVGPAELAEAELREETGLRAGRLDHLGQIFTAYGYADQACQVWLATELSLGRRELSVEEQDLVTRRFNHREWGDML SGGVIKDASSLAAWALLCASPLRERAFGRAVRFPGS
Sequences:
>Translated_196_residues MPAGDGGFVVRDTRIAYENPWMRVREDVLVRADGSPGLFGVVEKPDFALIIPVDTNGVWLVEQFRHPVDGRYWEFPQGSW EDQPEVGPAELAEAELREETGLRAGRLDHLGQIFTAYGYADQACQVWLATELSLGRRELSVEEQDLVTRRFNHREWGDML SGGVIKDASSLAAWALLCASPLRERAFGRAVRFPGS >Mature_195_residues PAGDGGFVVRDTRIAYENPWMRVREDVLVRADGSPGLFGVVEKPDFALIIPVDTNGVWLVEQFRHPVDGRYWEFPQGSWE DQPEVGPAELAEAELREETGLRAGRLDHLGQIFTAYGYADQACQVWLATELSLGRRELSVEEQDLVTRRFNHREWGDMLS GGVIKDASSLAAWALLCASPLRERAFGRAVRFPGS
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21945; Mature: 21814
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAGDGGFVVRDTRIAYENPWMRVREDVLVRADGSPGLFGVVEKPDFALIIPVDTNGVWL CCCCCCCEEEEECEEEECCCHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCEEE VEQFRHPVDGRYWEFPQGSWEDQPEVGPAELAEAELREETGLRAGRLDHLGQIFTAYGYA EHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC DQACQVWLATELSLGRRELSVEEQDLVTRRFNHREWGDMLSGGVIKDASSLAAWALLCAS CHHHEEEEEHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHCCCCHHCHHHHHHHHHHHHH PLRERAFGRAVRFPGS HHHHHHHCCCCCCCCC >Mature Secondary Structure PAGDGGFVVRDTRIAYENPWMRVREDVLVRADGSPGLFGVVEKPDFALIIPVDTNGVWL CCCCCCEEEEECEEEECCCHHHCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCEEE VEQFRHPVDGRYWEFPQGSWEDQPEVGPAELAEAELREETGLRAGRLDHLGQIFTAYGYA EHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC DQACQVWLATELSLGRRELSVEEQDLVTRRFNHREWGDMLSGGVIKDASSLAAWALLCAS CHHHEEEEEHHHHCCHHHCCCCHHHHHHHHCCCCHHHHHHCCCCHHCHHHHHHHHHHHHH PLRERAFGRAVRFPGS HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA