| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cutS [H]
Identifier: 158316569
GI number: 158316569
Start: 5737616
End: 5738230
Strand: Reverse
Name: cutS [H]
Synonym: Franean1_4805
Alternate gene names: 158316569
Gene position: 5738230-5737616 (Counterclockwise)
Preceding gene: 158316572
Following gene: 158316561
Centisome position: 63.89
GC content: 74.31
Gene sequence:
>615_bases GTGGCCCTCGCCGACCCGGACACGACGGTCGACTCGCTGCGGGCCGCCTGCCAGGACGTCCTCGCCCTCGGCGAAGCACA GGAGAGCCTCATCGAGGCGCTGCTCACGCTGGCCGGCGGCGAGCAGGGGGTGGAACACAGAGAACCGTTCGACCTGGCGG TCGTCGCCCGCGGCGTCCTGCTGACCCGGCGGACCGGAGGCGTCGACGGCACCGGACGGGACGATGGCGTCGAGGTGATC AGCGCGTTCGGCGCGGCGCCGACGGCCGGCGACCCACGGCTGGTCGAGAGCCTGGTGGCGAACCTGGTCGACAACGCGCT GCGGCACAACGTCCCCGGCGGACGAGTCGAGATCGTGACGGCGGCTACCAGGCACGGAGCACATCTCACGGCCCGCAACA CCGGACCGGTCGTCCCACCGGACCAGGTCGAGCGGCTCTTCCAGCCGTTCCAGCAGCTCGGCGGCCAGCGGGTCCGGCGG GCCGCCGGGCACGGCCTCGGGCTGGCGATCGTCCGCGCCGTCGCGGGCGCGCACGGCGCCACCCTGACCGCGCGCGCCCG GCCCGAGGGTGGCCTGGACATCGAGGTCCTCTTCCCTGGAGTCAGGATCCCCTGA
Upstream 100 bases:
>100_bases CGAGCGGCTGGAGGCGGCGTTCGCGTCGCAGCGGCACTTCGTCGCCAACGCCTCCCACGAGCTGCGGACGCCCCTGACCG CCACGCGGACGGTGCTGCAG
Downstream 100 bases:
>100_bases GCCAGGCCTAAAGATCCACGCTGTCGTCGTCGACCGGGTCGTCGTCGAGGAGGTAGGCGCCGCCGTCGTCGTCGAGGCCG AACGAGGCACCACCGGCTCC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MALADPDTTVDSLRAACQDVLALGEAQESLIEALLTLAGGEQGVEHREPFDLAVVARGVLLTRRTGGVDGTGRDDGVEVI SAFGAAPTAGDPRLVESLVANLVDNALRHNVPGGRVEIVTAATRHGAHLTARNTGPVVPPDQVERLFQPFQQLGGQRVRR AAGHGLGLAIVRAVAGAHGATLTARARPEGGLDIEVLFPGVRIP
Sequences:
>Translated_204_residues MALADPDTTVDSLRAACQDVLALGEAQESLIEALLTLAGGEQGVEHREPFDLAVVARGVLLTRRTGGVDGTGRDDGVEVI SAFGAAPTAGDPRLVESLVANLVDNALRHNVPGGRVEIVTAATRHGAHLTARNTGPVVPPDQVERLFQPFQQLGGQRVRR AAGHGLGLAIVRAVAGAHGATLTARARPEGGLDIEVLFPGVRIP >Mature_203_residues ALADPDTTVDSLRAACQDVLALGEAQESLIEALLTLAGGEQGVEHREPFDLAVVARGVLLTRRTGGVDGTGRDDGVEVIS AFGAAPTAGDPRLVESLVANLVDNALRHNVPGGRVEIVTAATRHGAHLTARNTGPVVPPDQVERLFQPFQQLGGQRVRRA AGHGLGLAIVRAVAGAHGATLTARARPEGGLDIEVLFPGVRIP
Specific function: Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=116, Percent_Identity=35.3448275862069, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787894, Length=192, Percent_Identity=31.25, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788393, Length=110, Percent_Identity=35.4545454545455, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1786783, Length=121, Percent_Identity=31.404958677686, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786912, Length=113, Percent_Identity=37.1681415929204, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786600, Length=181, Percent_Identity=26.5193370165746, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 21125; Mature: 20994
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALADPDTTVDSLRAACQDVLALGEAQESLIEALLTLAGGEQGVEHREPFDLAVVARGVL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LTRRTGGVDGTGRDDGVEVISAFGAAPTAGDPRLVESLVANLVDNALRHNVPGGRVEIVT HEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE AATRHGAHLTARNTGPVVPPDQVERLFQPFQQLGGQRVRRAAGHGLGLAIVRAVAGAHGA ECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC TLTARARPEGGLDIEVLFPGVRIP EEEECCCCCCCCEEEEECCCCCCC >Mature Secondary Structure ALADPDTTVDSLRAACQDVLALGEAQESLIEALLTLAGGEQGVEHREPFDLAVVARGVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH LTRRTGGVDGTGRDDGVEVISAFGAAPTAGDPRLVESLVANLVDNALRHNVPGGRVEIVT HEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEE AATRHGAHLTARNTGPVVPPDQVERLFQPFQQLGGQRVRRAAGHGLGLAIVRAVAGAHGA ECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC TLTARARPEGGLDIEVLFPGVRIP EEEECCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]