| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316559
Identifier: 158316559
GI number: 158316559
Start: 5725320
End: 5726840
Strand: Reverse
Name: 158316559
Synonym: Franean1_4795
Alternate gene names: NA
Gene position: 5726840-5725320 (Counterclockwise)
Preceding gene: 158316561
Following gene: 158316558
Centisome position: 63.76
GC content: 73.31
Gene sequence:
>1521_bases GTGGTGGATGACGAGCTCTACCGGCGGTGGCAGGTCGCCCGGCTGACCGAGCCGCTACACCGGCTGGAGATCCGTTCGGC CACCAAGGCCGACTTCAACCACGTTCGCTACGACCTCGTCCAGCTCGCGCTGCGCGCCATCGACTACGTGGTGGCACACC AGGCCAGCATGGAGGGCACCGTCACCCCCGACGAGCTGGTCGCCCACCTGGCCGGGCTGGCCCGCCGGCTCTCCCCGGAC GACCCGGACCGGCCCTGGACCCAGGTGGCGAAGCTGACGCTGGCGAACCTGCTCAACGACGGTCGTCCGCTGCGGGCCCG GTGGGGCGAACTGGCAGACTCCGACGACGAGCGCTCCGGTACCCGCACCTACAGCTTCCGGTTGTTACGCCTCCTCGACG CCGGTGACTCACCGCAACTGTCCGCCACCGACGAGGCGGTGATGCTCTACCTGCAGGCACTCGACGTCGACCTGGCGGAC CGGGAGGCGGCGGCGAAGCTGATCCTGCGCCGGCAGATGGAGGCGGGCGAGTTCGAGCGGGCGCGGCGCTCCGCGGTCGA CGCGCGGCGTACCGCCGAAGGGCTGGCCGCCTCGCTGCGTGACCGGCTTGACGAGACCCGGCGTGACCTGCGTGGCGTCG ACTGGAACGGGGACGTCCCGGCGCAGCTCAGAGGGGCCCACCAGCACGTCACCGAGCAGCTCGGCCTCGACCGGCACATC CTCGACCTCGCCGAGCGCGGGATTGAGCGCGGCAGCGGCACCGAGCGCGACGCGTGCCGCGCCGTCCTCGCGGAGGTGCG GCGCAGCCAGGAGGTCCACACCCGGCTCGAGCGGCTCATCGTCGGTGCGATCCCCGTCTACCTGGCGGCGCAGGAGGCGC AGCGTTTCGCGTCGGCAACGTCCAGCCTGGCTGTCGACCTGGGCGAAGACGTGCTCATGCCTTATCTGGCGGCGGACGAG GAGCGGGCGAGTACCGCCGCGACGGATTTCGTGGGGCGGCTCTGCGCGCGCTGCCCGCCTGTGTGGACCCTCGACACACT GGCCGCGGTGCTGCTGCGCCCACCGGCGATCTACGAGCAGTCGAAGCCCGCCTGGGACGATCCGGGTGATCTCGACGAGC CGGAGGAGCGGGGTCTGCCGGCGGATGTCGAGGCGGCGGCGAGCGCGGTGTTCCGCGAGTGCCGCACCGCACCGCACCGA CTGTCCGAGCTCGCCGCGCTCGGTGCCCACCACGCGGAGGACGTGGCGGACGTCTGCCTGCTCGACGACGTTATCCACCT CGCGGCGGCGGGCCGGTTCGTCGCCGGTGGGGGCTTCGGCGAGGACGACCCCGGCTCGGCGTCGACCGGGCTGGCCGCCG CGCTGGAAGGGCTGGCCGCGGAGGCCGACCGCACCCCGCTCGTCGGCGGCCGATGGCGCGGTGACGATCTGCTGGTGGGG CGGGCCTCCGGCCTGGCCGTACGGGAGGCCGAGGGGACAGCGGGCGGCGCGGTCGTGGCGTCGGGGGAGAGGTTGCCATG A
Upstream 100 bases:
>100_bases GCAACGGAGTCTGTCGACCACGTTGTCGGAGGGGGGCGTCATCATCGTGTACGGAAGAGGATCGACGCGCGTCCCATGGC TCGGGTAGAGGGAGAAGCCA
Downstream 100 bases:
>100_bases AGGCTGACGACGCCTACCAGGCAGGTCGCCTGCTCGCGCTCGCGCTCGACCACACCGCACGGCCGGGGAGCAAACATCCG GACTACGAACGGCTGCTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG RASGLAVREAEGTAGGAVVASGERLP
Sequences:
>Translated_506_residues MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG RASGLAVREAEGTAGGAVVASGERLP >Mature_506_residues MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG RASGLAVREAEGTAGGAVVASGERLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54951; Mature: 54951
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VTPDELVAHLAGLARRLSPDDPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSG CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC TRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLADREAAAKLILRRQMEAGEFER CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASAT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLAVDLGEDVLMPYLAADEERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQ HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCC SKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHRLSELAALGAHHAEDVADVCL CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH LDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG HHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE RASGLAVREAEGTAGGAVVASGERLP CCCCCEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VTPDELVAHLAGLARRLSPDDPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSG CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC TRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLADREAAAKLILRRQMEAGEFER CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASAT HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSLAVDLGEDVLMPYLAADEERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQ HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCC SKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHRLSELAALGAHHAEDVADVCL CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH LDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG HHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE RASGLAVREAEGTAGGAVVASGERLP CCCCCEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA