Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316559

Identifier: 158316559

GI number: 158316559

Start: 5725320

End: 5726840

Strand: Reverse

Name: 158316559

Synonym: Franean1_4795

Alternate gene names: NA

Gene position: 5726840-5725320 (Counterclockwise)

Preceding gene: 158316561

Following gene: 158316558

Centisome position: 63.76

GC content: 73.31

Gene sequence:

>1521_bases
GTGGTGGATGACGAGCTCTACCGGCGGTGGCAGGTCGCCCGGCTGACCGAGCCGCTACACCGGCTGGAGATCCGTTCGGC
CACCAAGGCCGACTTCAACCACGTTCGCTACGACCTCGTCCAGCTCGCGCTGCGCGCCATCGACTACGTGGTGGCACACC
AGGCCAGCATGGAGGGCACCGTCACCCCCGACGAGCTGGTCGCCCACCTGGCCGGGCTGGCCCGCCGGCTCTCCCCGGAC
GACCCGGACCGGCCCTGGACCCAGGTGGCGAAGCTGACGCTGGCGAACCTGCTCAACGACGGTCGTCCGCTGCGGGCCCG
GTGGGGCGAACTGGCAGACTCCGACGACGAGCGCTCCGGTACCCGCACCTACAGCTTCCGGTTGTTACGCCTCCTCGACG
CCGGTGACTCACCGCAACTGTCCGCCACCGACGAGGCGGTGATGCTCTACCTGCAGGCACTCGACGTCGACCTGGCGGAC
CGGGAGGCGGCGGCGAAGCTGATCCTGCGCCGGCAGATGGAGGCGGGCGAGTTCGAGCGGGCGCGGCGCTCCGCGGTCGA
CGCGCGGCGTACCGCCGAAGGGCTGGCCGCCTCGCTGCGTGACCGGCTTGACGAGACCCGGCGTGACCTGCGTGGCGTCG
ACTGGAACGGGGACGTCCCGGCGCAGCTCAGAGGGGCCCACCAGCACGTCACCGAGCAGCTCGGCCTCGACCGGCACATC
CTCGACCTCGCCGAGCGCGGGATTGAGCGCGGCAGCGGCACCGAGCGCGACGCGTGCCGCGCCGTCCTCGCGGAGGTGCG
GCGCAGCCAGGAGGTCCACACCCGGCTCGAGCGGCTCATCGTCGGTGCGATCCCCGTCTACCTGGCGGCGCAGGAGGCGC
AGCGTTTCGCGTCGGCAACGTCCAGCCTGGCTGTCGACCTGGGCGAAGACGTGCTCATGCCTTATCTGGCGGCGGACGAG
GAGCGGGCGAGTACCGCCGCGACGGATTTCGTGGGGCGGCTCTGCGCGCGCTGCCCGCCTGTGTGGACCCTCGACACACT
GGCCGCGGTGCTGCTGCGCCCACCGGCGATCTACGAGCAGTCGAAGCCCGCCTGGGACGATCCGGGTGATCTCGACGAGC
CGGAGGAGCGGGGTCTGCCGGCGGATGTCGAGGCGGCGGCGAGCGCGGTGTTCCGCGAGTGCCGCACCGCACCGCACCGA
CTGTCCGAGCTCGCCGCGCTCGGTGCCCACCACGCGGAGGACGTGGCGGACGTCTGCCTGCTCGACGACGTTATCCACCT
CGCGGCGGCGGGCCGGTTCGTCGCCGGTGGGGGCTTCGGCGAGGACGACCCCGGCTCGGCGTCGACCGGGCTGGCCGCCG
CGCTGGAAGGGCTGGCCGCGGAGGCCGACCGCACCCCGCTCGTCGGCGGCCGATGGCGCGGTGACGATCTGCTGGTGGGG
CGGGCCTCCGGCCTGGCCGTACGGGAGGCCGAGGGGACAGCGGGCGGCGCGGTCGTGGCGTCGGGGGAGAGGTTGCCATG
A

Upstream 100 bases:

>100_bases
GCAACGGAGTCTGTCGACCACGTTGTCGGAGGGGGGCGTCATCATCGTGTACGGAAGAGGATCGACGCGCGTCCCATGGC
TCGGGTAGAGGGAGAAGCCA

Downstream 100 bases:

>100_bases
AGGCTGACGACGCCTACCAGGCAGGTCGCCTGCTCGCGCTCGCGCTCGACCACACCGCACGGCCGGGGAGCAAACATCCG
GACTACGAACGGCTGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD
DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD
REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI
LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE
ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR
LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG
RASGLAVREAEGTAGGAVVASGERLP

Sequences:

>Translated_506_residues
MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD
DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD
REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI
LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE
ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR
LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG
RASGLAVREAEGTAGGAVVASGERLP
>Mature_506_residues
MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGTVTPDELVAHLAGLARRLSPD
DPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSGTRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLAD
REAAAKLILRRQMEAGEFERARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI
LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASATSSLAVDLGEDVLMPYLAADE
ERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQSKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHR
LSELAALGAHHAEDVADVCLLDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG
RASGLAVREAEGTAGGAVVASGERLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54951; Mature: 54951

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VTPDELVAHLAGLARRLSPDDPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSG
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
TRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLADREAAAKLILRRQMEAGEFER
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASAT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLAVDLGEDVLMPYLAADEERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQ
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCC
SKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHRLSELAALGAHHAEDVADVCL
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
LDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG
HHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
RASGLAVREAEGTAGGAVVASGERLP
CCCCCEEEECCCCCCCEEEECCCCCC
>Mature Secondary Structure
MVDDELYRRWQVARLTEPLHRLEIRSATKADFNHVRYDLVQLALRAIDYVVAHQASMEGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VTPDELVAHLAGLARRLSPDDPDRPWTQVAKLTLANLLNDGRPLRARWGELADSDDERSG
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCC
TRTYSFRLLRLLDAGDSPQLSATDEAVMLYLQALDVDLADREAAAKLILRRQMEAGEFER
CHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
ARRSAVDARRTAEGLAASLRDRLDETRRDLRGVDWNGDVPAQLRGAHQHVTEQLGLDRHI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
LDLAERGIERGSGTERDACRAVLAEVRRSQEVHTRLERLIVGAIPVYLAAQEAQRFASAT
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSLAVDLGEDVLMPYLAADEERASTAATDFVGRLCARCPPVWTLDTLAAVLLRPPAIYEQ
HHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHCC
SKPAWDDPGDLDEPEERGLPADVEAAASAVFRECRTAPHRLSELAALGAHHAEDVADVCL
CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHH
LDDVIHLAAAGRFVAGGGFGEDDPGSASTGLAAALEGLAAEADRTPLVGGRWRGDDLLVG
HHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
RASGLAVREAEGTAGGAVVASGERLP
CCCCCEEEECCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA