Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 158316484

GI number: 158316484

Start: 5633802

End: 5635145

Strand: Reverse

Name: yeaW [H]

Synonym: Franean1_4719

Alternate gene names: 158316484

Gene position: 5635145-5633802 (Counterclockwise)

Preceding gene: 158316485

Following gene: 158316483

Centisome position: 62.74

GC content: 65.62

Gene sequence:

>1344_bases
ATGGCTCTCACCGACGACCGCCGCCCGGTCGCCACTCGCGATGTTCCGTTTGCGATGCGTGACCGGTTACATGTGCCTCG
TGAGCGTTATTACGACCGGGGGTTCTACGAGCTGGAGAAGGAGTATCTGTGGCCGAGGGTCTGGCAGATGGCGTGCCGCC
TGGAGGAGATTCCGCAGCCTGGGGATTTCGTCGAGTACGAGATCTGCGACCAGTCGATTCTGGTGGTGCGGCAGCCTGAC
CGGTCGGTCAAGGCGTTCCATAATGCGTGCCGTCATCGGGCTACCCAGCTGTGTTCGGGTTCCGGGCGGCTTCCCGGAGG
GCAGATCGTGTGCCCGTTCCACGGCTGGCGGTGGAACCTCGACGGCAGTAACTCGTTCGTGTACGGCGCGGAGGGGTTCG
CGCCGGAGATCCTGCGTCCGGAGGACATTCGGCTGCAGGAGTGCAGGGTCGACACGTGGGGTGCCTGCGTGTGGATCAAC
ATGGATCCGGATGCCCGTCCGTTGCGGGAGGCGCTGGCGCCGGTAGCGGGGTTGCTGGACGCGGTGTGCGTGGAGAACAT
GCGGGTGTGGTGGTGGAAGGAGACGATCCTCAACGCGAACTGGAAGGTGGCTCAGGAGGCGTTCCACGAGGGCTATCACG
TGATGGGCACGCATCCGCAGCTCACGTTCGGTCTGGGTGACGACTATCCGTTCGGGAATGTCGAGTACACCGCGTTCGGG
AACGGCCACGGTCGTTTCCAGGGCCGGTTCGACCCGACCGCGGGCGGCGTCTCCCAGGGGCGTGGTGGGGAGGCGTTCCT
GGAGCGGTCGCGGATCCTGTGGGAGGGGCAGGACGCGATGACCCTCGAACGTGACCTGCACGTCTTCCGGGGGATGCGTA
ACCGGGTCGCGCCCGGTGAGGACTTCCCGACGGCGGCGATCAAGGCGTTGTTCGACTACGCCGAGGGTGCCGGTATCCCG
CTGCATCCGACACCGGAGGGCCTGCGGCTGTGGGGTGGCGGGGTTTTCCTGTTCCCGAACTTCCTCATGCTTCCCCAGTT
CGGTAACGCGCTGTCGTACCGGGTCCGCCCCTACAACGACGACCCCGAGTGGTGCCGTTTCGAGGTGTGGTCGTTGACCA
TGTACCCGGAGGGCGAGGAGCCCGGCCGGGCGAAGCTGAAGGGCCGCTTCGCCTCCGACGACACCGAGAACTGGGGTCTG
ATCCCACGCCAGGACTTCAGCAACATCGCAAGCCAGCAACGCGGCCTGCATTCGCGCAGCTACCGCGAGCACCGTCTCGC
CACCGAGATGGAGCAGCTCATCAGCAACATGCACTCCGAACTCGACCGGTACCTCGCCGGCTGA

Upstream 100 bases:

>100_bases
GCGCCATCGAGACGGTCTATGAGATCGGTGCCGAGATCGGGACGATCCAGGCGTCGGGCTGACACCGTATGGAAGCCCAC
GTGGCAGGAGGTTGATGTTG

Downstream 100 bases:

>100_bases
GGCACCGCACCGAAACCATCCACTCCATGGAGGGGCACCGTGTCGAAGTCGGATGCCAGCTACGACCATGCCGTTGACGT
CATTGTCGTGGGATCGGGCG

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MALTDDRRPVATRDVPFAMRDRLHVPRERYYDRGFYELEKEYLWPRVWQMACRLEEIPQPGDFVEYEICDQSILVVRQPD
RSVKAFHNACRHRATQLCSGSGRLPGGQIVCPFHGWRWNLDGSNSFVYGAEGFAPEILRPEDIRLQECRVDTWGACVWIN
MDPDARPLREALAPVAGLLDAVCVENMRVWWWKETILNANWKVAQEAFHEGYHVMGTHPQLTFGLGDDYPFGNVEYTAFG
NGHGRFQGRFDPTAGGVSQGRGGEAFLERSRILWEGQDAMTLERDLHVFRGMRNRVAPGEDFPTAAIKALFDYAEGAGIP
LHPTPEGLRLWGGGVFLFPNFLMLPQFGNALSYRVRPYNDDPEWCRFEVWSLTMYPEGEEPGRAKLKGRFASDDTENWGL
IPRQDFSNIASQQRGLHSRSYREHRLATEMEQLISNMHSELDRYLAG

Sequences:

>Translated_447_residues
MALTDDRRPVATRDVPFAMRDRLHVPRERYYDRGFYELEKEYLWPRVWQMACRLEEIPQPGDFVEYEICDQSILVVRQPD
RSVKAFHNACRHRATQLCSGSGRLPGGQIVCPFHGWRWNLDGSNSFVYGAEGFAPEILRPEDIRLQECRVDTWGACVWIN
MDPDARPLREALAPVAGLLDAVCVENMRVWWWKETILNANWKVAQEAFHEGYHVMGTHPQLTFGLGDDYPFGNVEYTAFG
NGHGRFQGRFDPTAGGVSQGRGGEAFLERSRILWEGQDAMTLERDLHVFRGMRNRVAPGEDFPTAAIKALFDYAEGAGIP
LHPTPEGLRLWGGGVFLFPNFLMLPQFGNALSYRVRPYNDDPEWCRFEVWSLTMYPEGEEPGRAKLKGRFASDDTENWGL
IPRQDFSNIASQQRGLHSRSYREHRLATEMEQLISNMHSELDRYLAG
>Mature_446_residues
ALTDDRRPVATRDVPFAMRDRLHVPRERYYDRGFYELEKEYLWPRVWQMACRLEEIPQPGDFVEYEICDQSILVVRQPDR
SVKAFHNACRHRATQLCSGSGRLPGGQIVCPFHGWRWNLDGSNSFVYGAEGFAPEILRPEDIRLQECRVDTWGACVWINM
DPDARPLREALAPVAGLLDAVCVENMRVWWWKETILNANWKVAQEAFHEGYHVMGTHPQLTFGLGDDYPFGNVEYTAFGN
GHGRFQGRFDPTAGGVSQGRGGEAFLERSRILWEGQDAMTLERDLHVFRGMRNRVAPGEDFPTAAIKALFDYAEGAGIPL
HPTPEGLRLWGGGVFLFPNFLMLPQFGNALSYRVRPYNDDPEWCRFEVWSLTMYPEGEEPGRAKLKGRFASDDTENWGLI
PRQDFSNIASQQRGLHSRSYREHRLATEMEQLISNMHSELDRYLAG

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=219, Percent_Identity=30.1369863013699, Blast_Score=108, Evalue=9e-25,
Organism=Escherichia coli, GI1788888, Length=211, Percent_Identity=30.8056872037915, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 51309; Mature: 51178

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTDDRRPVATRDVPFAMRDRLHVPRERYYDRGFYELEKEYLWPRVWQMACRLEEIPQP
CCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GDFVEYEICDQSILVVRQPDRSVKAFHNACRHRATQLCSGSGRLPGGQIVCPFHGWRWNL
CCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
DGSNSFVYGAEGFAPEILRPEDIRLQECRVDTWGACVWINMDPDARPLREALAPVAGLLD
CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AVCVENMRVWWWKETILNANWKVAQEAFHEGYHVMGTHPQLTFGLGDDYPFGNVEYTAFG
HHHHCCCEEEEEEHHHHCCCHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCEEEEEEC
NGHGRFQGRFDPTAGGVSQGRGGEAFLERSRILWEGQDAMTLERDLHVFRGMRNRVAPGE
CCCCEECCCCCCCCCCCCCCCCCHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHCCCCCC
DFPTAAIKALFDYAEGAGIPLHPTPEGLRLWGGGVFLFPNFLMLPQFGNALSYRVRPYND
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCEEECCCCCCEEEEEEECCCC
DPEWCRFEVWSLTMYPEGEEPGRAKLKGRFASDDTENWGLIPRQDFSNIASQQRGLHSRS
CCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
YREHRLATEMEQLISNMHSELDRYLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALTDDRRPVATRDVPFAMRDRLHVPRERYYDRGFYELEKEYLWPRVWQMACRLEEIPQP
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GDFVEYEICDQSILVVRQPDRSVKAFHNACRHRATQLCSGSGRLPGGQIVCPFHGWRWNL
CCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
DGSNSFVYGAEGFAPEILRPEDIRLQECRVDTWGACVWINMDPDARPLREALAPVAGLLD
CCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
AVCVENMRVWWWKETILNANWKVAQEAFHEGYHVMGTHPQLTFGLGDDYPFGNVEYTAFG
HHHHCCCEEEEEEHHHHCCCHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCEEEEEEC
NGHGRFQGRFDPTAGGVSQGRGGEAFLERSRILWEGQDAMTLERDLHVFRGMRNRVAPGE
CCCCEECCCCCCCCCCCCCCCCCHHHHHHCHHEECCCCCHHHHHHHHHHHHHHHCCCCCC
DFPTAAIKALFDYAEGAGIPLHPTPEGLRLWGGGVFLFPNFLMLPQFGNALSYRVRPYND
CCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCEEECCCCCCEEEEEEECCCC
DPEWCRFEVWSLTMYPEGEEPGRAKLKGRFASDDTENWGLIPRQDFSNIASQQRGLHSRS
CCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHH
YREHRLATEMEQLISNMHSELDRYLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]